| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yeiG [H]
Identifier: 119773145
GI number: 119773145
Start: 1522
End: 2367
Strand: Reverse
Name: yeiG [H]
Synonym: Sama_0003
Alternate gene names: 119773145
Gene position: 2367-1522 (Counterclockwise)
Preceding gene: 119773146
Following gene: 119773143
Centisome position: 0.05
GC content: 55.91
Gene sequence:
>846_bases ATGACGCTGGAATTAGTCAGTGCCAATCGCAGTTTTGATGGCTGGCACAAACAGTACAGTCATCAATCCAGCAGCCTGGA TTGCAAGATGCGCTTTGCGATTTTTCTGCCGCCCCAGGCCGAAACCCAAAGCGTACCAGTGCTTTATTGGCTGTCAGGGC TCACCTGCAGCGATGAAAACTTCATGCAGAAGGCAGGCGCTCAGCGCCTGGCCGCGACGCTCGGGCTTGCGATTGTTGCC ATGGACACCAGCCCCCGCGGCGAAGGTGTGGCCGACGATCCCGATGGCGCCTGGGACTTTGGCCTGGGGGCGGGCTTTTA TCTCAATGCCACTGAAGCGCCCTGGAATAAACACTACCGCATGTACGATTATGTGGTGAAAGAGCTGCCGAAGCTGATTG AAACCAACTTTCCGGTCAGCAGCAAACGCAGCATTGCCGGCCATTCCATGGGCGGCCACGGCGCCCTGACAATAGCGCTG AAAAACCCCGGTCGCTATGCCAGCGTGTCGGCCTTCAGCCCTATTTGTAATCCAAGCCAAAGCCCCTGGGGACAAAAGGC CTTTGGCAATTACCTGGGCAAAGACAGGGAAAGCTGGCGCGAGTATGACAGCTGTGAATTGATTGGCCGCGGCGCCGAAC CTATCCCCATGCTGGTGGATCAAGGTGATGCGGACAGCTTTTTAGAGGCAGAGCTCATGCCGCAGCGTCTGCAACATGCC GCAGACAATGCCGACTTTCCGCTGAATCTGCGAATGCAGCCTGGCTACGATCACAGCTACTACTTTATCGCGAGCTTTAT CGATGAACACCTGGAGTTTCATCATCACTGGTTGACCCGGAGATAA
Upstream 100 bases:
>100_bases CACCATGGGACTGGATGCGATTAACGAAGCGTTCGATCTGATGCACGAAGGCAAAAGTATCCGCAGCGTGATCCATTACG ATCGTAAATAAGGAGCCGCC
Downstream 100 bases:
>100_bases GTTCAAACTGCACCATAAGGGGCGCATGATCCGACACATTTGTTGTGGGTGATTGCGCCTTTTTCAGATGTAAACCTCGG TAAAATACCCAATCAAGTGG
Product: carboxylesterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTLELVSANRSFDGWHKQYSHQSSSLDCKMRFAIFLPPQAETQSVPVLYWLSGLTCSDENFMQKAGAQRLAATLGLAIVA MDTSPRGEGVADDPDGAWDFGLGAGFYLNATEAPWNKHYRMYDYVVKELPKLIETNFPVSSKRSIAGHSMGGHGALTIAL KNPGRYASVSAFSPICNPSQSPWGQKAFGNYLGKDRESWREYDSCELIGRGAEPIPMLVDQGDADSFLEAELMPQRLQHA ADNADFPLNLRMQPGYDHSYYFIASFIDEHLEFHHHWLTRR
Sequences:
>Translated_281_residues MTLELVSANRSFDGWHKQYSHQSSSLDCKMRFAIFLPPQAETQSVPVLYWLSGLTCSDENFMQKAGAQRLAATLGLAIVA MDTSPRGEGVADDPDGAWDFGLGAGFYLNATEAPWNKHYRMYDYVVKELPKLIETNFPVSSKRSIAGHSMGGHGALTIAL KNPGRYASVSAFSPICNPSQSPWGQKAFGNYLGKDRESWREYDSCELIGRGAEPIPMLVDQGDADSFLEAELMPQRLQHA ADNADFPLNLRMQPGYDHSYYFIASFIDEHLEFHHHWLTRR >Mature_280_residues TLELVSANRSFDGWHKQYSHQSSSLDCKMRFAIFLPPQAETQSVPVLYWLSGLTCSDENFMQKAGAQRLAATLGLAIVAM DTSPRGEGVADDPDGAWDFGLGAGFYLNATEAPWNKHYRMYDYVVKELPKLIETNFPVSSKRSIAGHSMGGHGALTIALK NPGRYASVSAFSPICNPSQSPWGQKAFGNYLGKDRESWREYDSCELIGRGAEPIPMLVDQGDADSFLEAELMPQRLQHAA DNADFPLNLRMQPGYDHSYYFIASFIDEHLEFHHHWLTRR
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=282, Percent_Identity=52.1276595744681, Blast_Score=315, Evalue=4e-86, Organism=Escherichia coli, GI1788477, Length=280, Percent_Identity=58.2142857142857, Blast_Score=337, Evalue=7e-94, Organism=Escherichia coli, GI1786551, Length=279, Percent_Identity=50.5376344086022, Blast_Score=307, Evalue=4e-85, Organism=Caenorhabditis elegans, GI17510185, Length=284, Percent_Identity=48.943661971831, Blast_Score=270, Evalue=9e-73, Organism=Saccharomyces cerevisiae, GI6322393, Length=275, Percent_Identity=45.0909090909091, Blast_Score=231, Evalue=7e-62, Organism=Drosophila melanogaster, GI45551932, Length=284, Percent_Identity=51.056338028169, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI24648347, Length=284, Percent_Identity=51.056338028169, Blast_Score=287, Evalue=7e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31488; Mature: 31356
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLELVSANRSFDGWHKQYSHQSSSLDCKMRFAIFLPPQAETQSVPVLYWLSGLTCSDEN CEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCHH FMQKAGAQRLAATLGLAIVAMDTSPRGEGVADDPDGAWDFGLGAGFYLNATEAPWNKHYR HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCHHCHH MYDYVVKELPKLIETNFPVSSKRSIAGHSMGGHGALTIALKNPGRYASVSAFSPICNPSQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCCCCCCC SPWGQKAFGNYLGKDRESWREYDSCELIGRGAEPIPMLVDQGDADSFLEAELMPQRLQHA CCCCHHHHHHHHCCCHHHHHCCCCHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH ADNADFPLNLRMQPGYDHSYYFIASFIDEHLEFHHHWLTRR CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLELVSANRSFDGWHKQYSHQSSSLDCKMRFAIFLPPQAETQSVPVLYWLSGLTCSDEN EEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCHH FMQKAGAQRLAATLGLAIVAMDTSPRGEGVADDPDGAWDFGLGAGFYLNATEAPWNKHYR HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCHHCHH MYDYVVKELPKLIETNFPVSSKRSIAGHSMGGHGALTIALKNPGRYASVSAFSPICNPSQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCCCCCCC SPWGQKAFGNYLGKDRESWREYDSCELIGRGAEPIPMLVDQGDADSFLEAELMPQRLQHA CCCCHHHHHHHHCCCHHHHHCCCCHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH ADNADFPLNLRMQPGYDHSYYFIASFIDEHLEFHHHWLTRR CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA