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The map label for this gene is rpmH

Identifier: 119718917

GI number: 119718917

Start: 4985272

End: 4985409

Strand: Reverse

Name: rpmH

Synonym: Noca_4700

Alternate gene names: 119718917

Gene position: 4985409-4985272 (Counterclockwise)

Preceding gene: NA

Following gene: 119718916

Centisome position: 99.99

GC content: 68.84

Gene sequence:

>138_bases
GTGAGCAAGCGTACGTACCAGCCGAACAACCGCCGTCGCCACAAGGTGCACGGCTTCCGCCTGCGCATGCGTACCCGTGC
CGGCCGCGCGATCTTGTCCTCGCGGCGCCGCAAGGGACGCAAGAGCCTCGCCGTCTGA

Upstream 100 bases:

>100_bases
CCAGCCGAAAGGCGCCCCAGGGTCCCGAATCCCGACCCGACGGCACCGCACTGCCGCTCCGGCCCGGCGTGACTGCCCTG
ACCCACATGGAGAGAAGCTC

Downstream 100 bases:

>100_bases
CGGCCCACCCCGTCCGCTCGCTGCTCCCGGCCACGTGCTGTCCGCGGCGCACCGACTCCGCGACGGCGCCACGTTCCGTG
AGGCGATCCGTCGGGGCCGA

Product: 50S ribosomal protein L34P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 44

Protein sequence:

>45_residues
MSKRTYQPNNRRRHKVHGFRLRMRTRAGRAILSSRRRKGRKSLAV

Sequences:

>Translated_45_residues
MSKRTYQPNNRRRHKVHGFRLRMRTRAGRAILSSRRRKGRKSLAV
>Mature_44_residues
SKRTYQPNNRRRHKVHGFRLRMRTRAGRAILSSRRRKGRKSLAV

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_NOCSJ (A1SQW0)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_925882.1
- ProteinModelPortal:   A1SQW0
- SMR:   A1SQW0
- STRING:   A1SQW0
- GeneID:   4598244
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_4700
- eggNOG:   COG0230
- HOGENOM:   HBG729750
- BioCyc:   NSP35761:NOCA_4700-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- InterPro:   IPR020939
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5448; Mature: 5316

Theoretical pI: Translated: 13.24; Mature: 13.24

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRTYQPNNRRRHKVHGFRLRMRTRAGRAILSSRRRKGRKSLAV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKRTYQPNNRRRHKVHGFRLRMRTRAGRAILSSRRRKGRKSLAV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA