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The map label for this gene is 119718889

Identifier: 119718889

GI number: 119718889

Start: 4950772

End: 4951383

Strand: Reverse

Name: 119718889

Synonym: Noca_4672

Alternate gene names: NA

Gene position: 4951383-4950772 (Counterclockwise)

Preceding gene: 119718892

Following gene: 119718888

Centisome position: 99.31

GC content: 75.65

Gene sequence:

>612_bases
ATGACCGGCATCGGGGCCGTGCGGCCGGTGGGCCCGGCCGATGAGGTGTGGGAGCGCGCGACCGACGGGTTCAACCGCTG
GGTCGCGGGGGAGCCGGGCGGTCTGGACGACCTGGTGGCGGTGATGACACCGGTGCTGTGGCACGTGGTCCGCTCCTACC
GCCTCTCGGAGTCCGCCGCCGAGGACGTCATCCAGACGGCCTGGCTGGCGCTGGTACGCCGCCGGGCGGCGATCCTCGAC
GCGAAGGCGGTCGGCGGCTGGCTGACCACCACCGCGCGCCGCGAGGCCTGGCGGGTCGCGCAGGCGGCGTCCGCGGCGAT
GCCCGCGGACGACGAGGACCTGGCGCCGCTGCTGCCGCGGCAGCGCTCGGCCGAGGACGCCGTGGTTCAGCGCGACGAGG
GCGACCGGCTGTGGGCCGCCGTCGACCGGCTGCCCGAGCGGTGCCGCCGGCTGCTGCGGATCGTCGCGTTCGAGAACCGG
CCCGACTACCGCGAGCTGGCGGCCGACCTGGACATGCCGGTGGGGAGCATCGGCCCCACCCGGGGCCGGTGCCTGGCGAA
GCTGCGGGTGGCATTGGTGCAGAACGGCGCCACTGGAACGGGGGAGTACTGA

Upstream 100 bases:

>100_bases
CAGGTATCTGCGCGCGTCTCCCCGACTCCTGGGAGGCGTGATCATCACCGAGCGACTGGCCGGGCGACCGGGCGGACGAC
ACAGGGGAGCGACACGAGCG

Downstream 100 bases:

>100_bases
TGAGCGAGCTGAGCCGCGAGGACCTGCTGGGGATCGTGCGGGACGTGTGGGAGCAGCGCGACCCGGTGCCCGAGCACCTG
GTCCCCGCGATGCAGGCGGC

Product: sigma-70 region 2 domain-containing protein

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma-70 Region 2 Domain-Containing Protein; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTGIGAVRPVGPADEVWERATDGFNRWVAGEPGGLDDLVAVMTPVLWHVVRSYRLSESAAEDVIQTAWLALVRRRAAILD
AKAVGGWLTTTARREAWRVAQAASAAMPADDEDLAPLLPRQRSAEDAVVQRDEGDRLWAAVDRLPERCRRLLRIVAFENR
PDYRELAADLDMPVGSIGPTRGRCLAKLRVALVQNGATGTGEY

Sequences:

>Translated_203_residues
MTGIGAVRPVGPADEVWERATDGFNRWVAGEPGGLDDLVAVMTPVLWHVVRSYRLSESAAEDVIQTAWLALVRRRAAILD
AKAVGGWLTTTARREAWRVAQAASAAMPADDEDLAPLLPRQRSAEDAVVQRDEGDRLWAAVDRLPERCRRLLRIVAFENR
PDYRELAADLDMPVGSIGPTRGRCLAKLRVALVQNGATGTGEY
>Mature_202_residues
TGIGAVRPVGPADEVWERATDGFNRWVAGEPGGLDDLVAVMTPVLWHVVRSYRLSESAAEDVIQTAWLALVRRRAAILDA
KAVGGWLTTTARREAWRVAQAASAAMPADDEDLAPLLPRQRSAEDAVVQRDEGDRLWAAVDRLPERCRRLLRIVAFENRP
DYRELAADLDMPVGSIGPTRGRCLAKLRVALVQNGATGTGEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22238; Mature: 22107

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIGAVRPVGPADEVWERATDGFNRWVAGEPGGLDDLVAVMTPVLWHVVRSYRLSESAA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDVIQTAWLALVRRRAAILDAKAVGGWLTTTARREAWRVAQAASAAMPADDEDLAPLLPR
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QRSAEDAVVQRDEGDRLWAAVDRLPERCRRLLRIVAFENRPDYRELAADLDMPVGSIGPT
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
RGRCLAKLRVALVQNGATGTGEY
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGIGAVRPVGPADEVWERATDGFNRWVAGEPGGLDDLVAVMTPVLWHVVRSYRLSESAA
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDVIQTAWLALVRRRAAILDAKAVGGWLTTTARREAWRVAQAASAAMPADDEDLAPLLPR
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QRSAEDAVVQRDEGDRLWAAVDRLPERCRRLLRIVAFENRPDYRELAADLDMPVGSIGPT
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
RGRCLAKLRVALVQNGATGTGEY
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA