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The map label for this gene is psuG

Identifier: 119718838

GI number: 119718838

Start: 4898560

End: 4899483

Strand: Reverse

Name: psuG

Synonym: Noca_4621

Alternate gene names: 119718838

Gene position: 4899483-4898560 (Counterclockwise)

Preceding gene: 119718839

Following gene: 119718837

Centisome position: 98.27

GC content: 73.27

Gene sequence:

>924_bases
ATGACCGCACCTCACCCCCTGCTCACCCTCACCGACGAGGTCGCCGACGCGCTGCGCGACGGCGCCCCGGTGGTCGCGCT
GGAGAGCACGATCATCAGCCACGGGATGCCCTACCCGCAGAACGTCGCGATGGCGACCGAGGTCGAGGGGATCATCCGCG
CGGCCGGGGCAGTGCCGGCGACCATCGCCGTCCTCGAGGGCCGGCCGCGGATCGGGCTCACCGCCGACGACCTCGAGCTG
CTCGCGAGCGACGAGGACGTGGCGAAGGTCAGCGTGCGGGACCTGCCGTTCGTCGTCGCCCGCCGCAGCCACGGCGCGAC
GACGGTCGCCGCGACGATGCGCCTGGCCGCCCTCGCCGGCATCCGCGTCTTCGTCACCGGCGGCCTCGGCGGCGTCCACC
GCGGTGCCCAGCAGTCCTTCGACGAGTCCGCCGACCTGACCGAGCTCGGCAGCACCGACGTCGCCGTCATCTCCGCCGGG
GTCAAGAGCATCCTCGACATCGGCCTCACCCTGGAGCGCCTCGAGACCCTCGGAGTCCCGGTCCTCGCCTACGGCTCGGA
CGAGTTCCCCTCCTTCTACTCCCGCTCCAGCGGCCACGCCGCCCCGATGCGGGTCGACTCCGCCGCGGAGGTCGCCGCGG
TGATGGCCGCCAAGTGGGACCTCGGCATCGCCGGCGGTGTCGTCGTCGCGAACCCGATCCCCGAGGCCGACGAGATCCCC
GCCGACGAGATCGGCGGGATCATCGAGCAGGCGCTCGCCGACATGGCGGCCCGGGGCATCCACGGCAACGAGGCGACGCC
GTACCTCCTCGGCCGGATCGTCGAGATCACCGGCGGCGCCTCGCTGACCGCGAACATCGCGCTGGTGCGGGCCAACGCGC
GACTCGGCGCATCGATCGCGCGGGAGTACGCCGGCCTCAGGTGA

Upstream 100 bases:

>100_bases
AGGCCGCGGCGTACGGCCACGCCGCCGCCGCCCTCACCGTCGCCAGCACCGACACCGTCCGAACCGACCTCACCGACCGA
CTCGTCAGGAGCCTGCTGTC

Downstream 100 bases:

>100_bases
CCGTCGCACCCGTGCGCAGAGCAGCGCAGGGCGTGCGAGGGTCGGTACGGGTCGCGGTGGTCGTCGGGTGGTGGCGGCGG
GCCGAAGGTCGGTGGTCGGT

Product: indigoidine synthase A family protein

Products: NA

Alternate protein names: PsiMP glycosidase

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTAPHPLLTLTDEVADALRDGAPVVALESTIISHGMPYPQNVAMATEVEGIIRAAGAVPATIAVLEGRPRIGLTADDLEL
LASDEDVAKVSVRDLPFVVARRSHGATTVAATMRLAALAGIRVFVTGGLGGVHRGAQQSFDESADLTELGSTDVAVISAG
VKSILDIGLTLERLETLGVPVLAYGSDEFPSFYSRSSGHAAPMRVDSAAEVAAVMAAKWDLGIAGGVVVANPIPEADEIP
ADEIGGIIEQALADMAARGIHGNEATPYLLGRIVEITGGASLTANIALVRANARLGASIAREYAGLR

Sequences:

>Translated_307_residues
MTAPHPLLTLTDEVADALRDGAPVVALESTIISHGMPYPQNVAMATEVEGIIRAAGAVPATIAVLEGRPRIGLTADDLEL
LASDEDVAKVSVRDLPFVVARRSHGATTVAATMRLAALAGIRVFVTGGLGGVHRGAQQSFDESADLTELGSTDVAVISAG
VKSILDIGLTLERLETLGVPVLAYGSDEFPSFYSRSSGHAAPMRVDSAAEVAAVMAAKWDLGIAGGVVVANPIPEADEIP
ADEIGGIIEQALADMAARGIHGNEATPYLLGRIVEITGGASLTANIALVRANARLGASIAREYAGLR
>Mature_306_residues
TAPHPLLTLTDEVADALRDGAPVVALESTIISHGMPYPQNVAMATEVEGIIRAAGAVPATIAVLEGRPRIGLTADDLELL
ASDEDVAKVSVRDLPFVVARRSHGATTVAATMRLAALAGIRVFVTGGLGGVHRGAQQSFDESADLTELGSTDVAVISAGV
KSILDIGLTLERLETLGVPVLAYGSDEFPSFYSRSSGHAAPMRVDSAAEVAAVMAAKWDLGIAGGVVVANPIPEADEIPA
DEIGGIIEQALADMAARGIHGNEATPYLLGRIVEITGGASLTANIALVRANARLGASIAREYAGLR

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family

Homologues:

Organism=Escherichia coli, GI1788490, Length=301, Percent_Identity=56.1461794019934, Blast_Score=336, Evalue=1e-93,
Organism=Caenorhabditis elegans, GI25147470, Length=302, Percent_Identity=44.3708609271523, Blast_Score=258, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24580669, Length=302, Percent_Identity=51.6556291390728, Blast_Score=273, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSUG_NOCSJ (A1SQN1)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_925803.1
- ProteinModelPortal:   A1SQN1
- SMR:   A1SQN1
- STRING:   A1SQN1
- GeneID:   4596077
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_4621
- eggNOG:   COG2313
- HOGENOM:   HBG308892
- OMA:   PATIAVM
- PhylomeDB:   A1SQN1
- ProtClustDB:   CLSK862888
- BioCyc:   NSP35761:NOCA_4621-MONOMER
- HAMAP:   MF_01876
- InterPro:   IPR022830
- InterPro:   IPR007342
- PANTHER:   PTHR10584:SF1

Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA

EC number: NA

Molecular weight: Translated: 31541; Mature: 31410

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPHPLLTLTDEVADALRDGAPVVALESTIISHGMPYPQNVAMATEVEGIIRAAGAVPA
CCCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCE
TIAVLEGRPRIGLTADDLELLASDEDVAKVSVRDLPFVVARRSHGATTVAATMRLAALAG
EEEEECCCCCCCCCHHHHHHHCCCCCHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHC
IRVFVTGGLGGVHRGAQQSFDESADLTELGSTDVAVISAGVKSILDIGLTLERLETLGVP
EEEEEECCCCHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCC
VLAYGSDEFPSFYSRSSGHAAPMRVDSAAEVAAVMAAKWDLGIAGGVVVANPIPEADEIP
EEEECCCCCCHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
ADEIGGIIEQALADMAARGIHGNEATPYLLGRIVEITGGASLTANIALVRANARLGASIA
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCEEEEEEEEEECCHHHHHHH
REYAGLR
HHHCCCC
>Mature Secondary Structure 
TAPHPLLTLTDEVADALRDGAPVVALESTIISHGMPYPQNVAMATEVEGIIRAAGAVPA
CCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCE
TIAVLEGRPRIGLTADDLELLASDEDVAKVSVRDLPFVVARRSHGATTVAATMRLAALAG
EEEEECCCCCCCCCHHHHHHHCCCCCHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHC
IRVFVTGGLGGVHRGAQQSFDESADLTELGSTDVAVISAGVKSILDIGLTLERLETLGVP
EEEEEECCCCHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCC
VLAYGSDEFPSFYSRSSGHAAPMRVDSAAEVAAVMAAKWDLGIAGGVVVANPIPEADEIP
EEEECCCCCCHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
ADEIGGIIEQALADMAARGIHGNEATPYLLGRIVEITGGASLTANIALVRANARLGASIA
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCEEEEEEEEEECCHHHHHHH
REYAGLR
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA