| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718836
Identifier: 119718836
GI number: 119718836
Start: 4894151
End: 4894657
Strand: Reverse
Name: 119718836
Synonym: Noca_4619
Alternate gene names: NA
Gene position: 4894657-4894151 (Counterclockwise)
Preceding gene: 119718837
Following gene: 119718831
Centisome position: 98.17
GC content: 71.4
Gene sequence:
>507_bases ATGAACACCGCAGCCGTCTTCATCGACCTCTTCGAGCGGATCCTCGAGAACGGCATCGCCGCCGTCGAGGGCCTCGACAA GGACCAGCTCGCCCACCGCCCGGCGCCGGACACCAACTCCATCGCGTGGCTGGTCTGGCACACCGCGCGTGTGCAGGACG CCCAGGTCGCGCACCTCGCCGGCACCGAGCAGGTGTGGTCCACCCAGGGCTGGGTGGAGCGCTTCGGCCTGCCGCTCGAC CCGGCCGACCACGGCTACGGCCACTCCAGCGACCAGGTCGGCAAGGTCCGCGCGACCGGCGACCTGCTGGCCGGCTACCT GCGGGCGGTGCACGAGGCGACCGTGGCCTACCTGCGCGGTCTCACCGACGACGACCTCGACGACGTGATCGACACGCGCT GGGATCCGCCGGTCACCCGCGGCGTGCGGCTGGTCAGCATCGTCGACGACGACGCCCAGCACGTCGGCCAGGCGGCGTAC CTCCGCGGTCTGCTCCTAGCTGTCTAA
Upstream 100 bases:
>100_bases TGAGGCGCGGGGCGCCAGTACGGGTCGTGTGCCCGAGGACGCGCCATGGCGCGTGCTCAGGCACACGACCCGGAAGCCCC GGCGTCGTAACGTCTGCGCC
Downstream 100 bases:
>100_bases GCCCTTGGACCTATCCGTCTAGCCCGCTGAGGAGCGGCTCAACCGGTACCGGACGAAGGACGGCACGGCGAGCGCCGCGA CCACGGTGCCGAGCACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNTAAVFIDLFERILENGIAAVEGLDKDQLAHRPAPDTNSIAWLVWHTARVQDAQVAHLAGTEQVWSTQGWVERFGLPLD PADHGYGHSSDQVGKVRATGDLLAGYLRAVHEATVAYLRGLTDDDLDDVIDTRWDPPVTRGVRLVSIVDDDAQHVGQAAY LRGLLLAV
Sequences:
>Translated_168_residues MNTAAVFIDLFERILENGIAAVEGLDKDQLAHRPAPDTNSIAWLVWHTARVQDAQVAHLAGTEQVWSTQGWVERFGLPLD PADHGYGHSSDQVGKVRATGDLLAGYLRAVHEATVAYLRGLTDDDLDDVIDTRWDPPVTRGVRLVSIVDDDAQHVGQAAY LRGLLLAV >Mature_168_residues MNTAAVFIDLFERILENGIAAVEGLDKDQLAHRPAPDTNSIAWLVWHTARVQDAQVAHLAGTEQVWSTQGWVERFGLPLD PADHGYGHSSDQVGKVRATGDLLAGYLRAVHEATVAYLRGLTDDDLDDVIDTRWDPPVTRGVRLVSIVDDDAQHVGQAAY LRGLLLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18372; Mature: 18372
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAAVFIDLFERILENGIAAVEGLDKDQLAHRPAPDTNSIAWLVWHTARVQDAQVAHLA CCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHC GTEQVWSTQGWVERFGLPLDPADHGYGHSSDQVGKVRATGDLLAGYLRAVHEATVAYLRG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC LTDDDLDDVIDTRWDPPVTRGVRLVSIVDDDAQHVGQAAYLRGLLLAV CCCCCHHHHHHCCCCCCHHHCEEEEEEECCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTAAVFIDLFERILENGIAAVEGLDKDQLAHRPAPDTNSIAWLVWHTARVQDAQVAHLA CCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHC GTEQVWSTQGWVERFGLPLDPADHGYGHSSDQVGKVRATGDLLAGYLRAVHEATVAYLRG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC LTDDDLDDVIDTRWDPPVTRGVRLVSIVDDDAQHVGQAAYLRGLLLAV CCCCCHHHHHHCCCCCCHHHCEEEEEEECCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA