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The map label for this gene is 119718827

Identifier: 119718827

GI number: 119718827

Start: 4884767

End: 4885870

Strand: Reverse

Name: 119718827

Synonym: Noca_4610

Alternate gene names: NA

Gene position: 4885870-4884767 (Counterclockwise)

Preceding gene: 119718828

Following gene: 119718826

Centisome position: 97.99

GC content: 67.48

Gene sequence:

>1104_bases
ATGACCGCTCATACCCGGTTCCGCGTCGCGGTCGCCATCGGAGCGTTGCTCGCTCCGCTCGCGGTCGTGGCCGCGACCTC
CGCTCCGGCCAATGCACTACCCGCGAAGCACAAGCACGAGGTCTACATCTACAAGGTAGAGAAGAACCTGAAGCTCGCAG
GCGTCGGCACGGACACCGTCGGCGACTCGACGGCACCCACGCTCAGCTGCGACCCCGGTGACACCGTCCTCGACGGCATG
TGGAGGGTCAAGAGCGTCGACCAGTACCAGCCGCCGCCGCCCGACCCGGACGAAGACCCCGACTTCCCGAGCACCAGCAC
GGCCGGTGGTGTGTACAACGACGTGCGCGACGTGCACGTGGTCGCGTCGTACCCCGACCAGCTCGACGCCCGCAGGTGGA
ACTACCAGTTCGAGAACCGCGCGTACGGCGACGCCCAGCTCAAGCTCTACGTGACCTGCGTCCGCGGCTACACGGAGTAC
ACCAACTCGCACCGGCACCAGATCGAGGTCCAGAACCTCACGAGCGTCGCGGCCTCGACCTCCGACCATCCTTCGTGGTC
CGGCGTCCGGAGCTACTACGAGTGGGGTGGCGCGCCGTGCGCTGCTGGGAGGTACTTCGTGGCCCCGGGCTTCAAGCTCG
ACAACCCGGCGACCGACCACCGGTTGGTCGGCAGCTACCCGAAGTTCGGCAGTGCCGGCTTGGCCTGGACCTGGGAGTTC
GGTGGCACCGGTCTGACGTCCGCGACGTTCTACGGCAAGTGCATCAGCCGCAAGGTGCTCACCGGCGCCTCGCACCAGCA
CGCGCTGGCGATGAAGCACATGCCGAGCGCGGACCCGACCGCCGGCCACCTGACCAGCATTCCCGTCGGTGACCCGTACG
AGGTGCGGTACTCCTGTGATCAGGACGAGCCCAGCTACTCCGGCTACAAGGCGGCGGTCGGCTGGTTCTGGATGGGCAAC
TACTGGGAGGACACCTGGTTCCTCGGCATGGAGCCGCGGCCCAAGACCCGGGCCTACTCCTTCTGGAACGGCGGCGCGAG
CAGTGCCCAGGTCACCCTCGGGACCCTGTGCATCAACAGCCGGACGGCCAACCCGATCCTCTAG

Upstream 100 bases:

>100_bases
GCGACTTAGCCTGTCGAATACCGGGCTGGGGGGGCCGGAGGAACGCTCTCGGGAGACGTGCTCACGCCCTATTTCCTGTC
AATGCAAGGAGAGCGTCGTC

Downstream 100 bases:

>100_bases
CAGTTCCTGCACAGAGGTGAACACCTGACCCGAGCCCGTCCCGTGAACGGGGCGGGCTCGGGCATACCCGGAGCCCCCCA
CCGGGCGGACCTGTACACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTAHTRFRVAVAIGALLAPLAVVAATSAPANALPAKHKHEVYIYKVEKNLKLAGVGTDTVGDSTAPTLSCDPGDTVLDGM
WRVKSVDQYQPPPPDPDEDPDFPSTSTAGGVYNDVRDVHVVASYPDQLDARRWNYQFENRAYGDAQLKLYVTCVRGYTEY
TNSHRHQIEVQNLTSVAASTSDHPSWSGVRSYYEWGGAPCAAGRYFVAPGFKLDNPATDHRLVGSYPKFGSAGLAWTWEF
GGTGLTSATFYGKCISRKVLTGASHQHALAMKHMPSADPTAGHLTSIPVGDPYEVRYSCDQDEPSYSGYKAAVGWFWMGN
YWEDTWFLGMEPRPKTRAYSFWNGGASSAQVTLGTLCINSRTANPIL

Sequences:

>Translated_367_residues
MTAHTRFRVAVAIGALLAPLAVVAATSAPANALPAKHKHEVYIYKVEKNLKLAGVGTDTVGDSTAPTLSCDPGDTVLDGM
WRVKSVDQYQPPPPDPDEDPDFPSTSTAGGVYNDVRDVHVVASYPDQLDARRWNYQFENRAYGDAQLKLYVTCVRGYTEY
TNSHRHQIEVQNLTSVAASTSDHPSWSGVRSYYEWGGAPCAAGRYFVAPGFKLDNPATDHRLVGSYPKFGSAGLAWTWEF
GGTGLTSATFYGKCISRKVLTGASHQHALAMKHMPSADPTAGHLTSIPVGDPYEVRYSCDQDEPSYSGYKAAVGWFWMGN
YWEDTWFLGMEPRPKTRAYSFWNGGASSAQVTLGTLCINSRTANPIL
>Mature_366_residues
TAHTRFRVAVAIGALLAPLAVVAATSAPANALPAKHKHEVYIYKVEKNLKLAGVGTDTVGDSTAPTLSCDPGDTVLDGMW
RVKSVDQYQPPPPDPDEDPDFPSTSTAGGVYNDVRDVHVVASYPDQLDARRWNYQFENRAYGDAQLKLYVTCVRGYTEYT
NSHRHQIEVQNLTSVAASTSDHPSWSGVRSYYEWGGAPCAAGRYFVAPGFKLDNPATDHRLVGSYPKFGSAGLAWTWEFG
GTGLTSATFYGKCISRKVLTGASHQHALAMKHMPSADPTAGHLTSIPVGDPYEVRYSCDQDEPSYSGYKAAVGWFWMGNY
WEDTWFLGMEPRPKTRAYSFWNGGASSAQVTLGTLCINSRTANPIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40094; Mature: 39963

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAHTRFRVAVAIGALLAPLAVVAATSAPANALPAKHKHEVYIYKVEKNLKLAGVGTDTV
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCC
GDSTAPTLSCDPGDTVLDGMWRVKSVDQYQPPPPDPDEDPDFPSTSTAGGVYNDVRDVHV
CCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEE
VASYPDQLDARRWNYQFENRAYGDAQLKLYVTCVRGYTEYTNSHRHQIEVQNLTSVAAST
EECCCCHHCCHHCCEEECCCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEEHHHHHHHHCC
SDHPSWSGVRSYYEWGGAPCAAGRYFVAPGFKLDNPATDHRLVGSYPKFGSAGLAWTWEF
CCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
GGTGLTSATFYGKCISRKVLTGASHQHALAMKHMPSADPTAGHLTSIPVGDPYEVRYSCD
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEECC
QDEPSYSGYKAAVGWFWMGNYWEDTWFLGMEPRPKTRAYSFWNGGASSAQVTLGTLCINS
CCCCCCCCEEEEEEEEEECCEECCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECC
RTANPIL
CCCCCCC
>Mature Secondary Structure 
TAHTRFRVAVAIGALLAPLAVVAATSAPANALPAKHKHEVYIYKVEKNLKLAGVGTDTV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCC
GDSTAPTLSCDPGDTVLDGMWRVKSVDQYQPPPPDPDEDPDFPSTSTAGGVYNDVRDVHV
CCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEE
VASYPDQLDARRWNYQFENRAYGDAQLKLYVTCVRGYTEYTNSHRHQIEVQNLTSVAAST
EECCCCHHCCHHCCEEECCCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEEHHHHHHHHCC
SDHPSWSGVRSYYEWGGAPCAAGRYFVAPGFKLDNPATDHRLVGSYPKFGSAGLAWTWEF
CCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
GGTGLTSATFYGKCISRKVLTGASHQHALAMKHMPSADPTAGHLTSIPVGDPYEVRYSCD
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEECC
QDEPSYSGYKAAVGWFWMGNYWEDTWFLGMEPRPKTRAYSFWNGGASSAQVTLGTLCINS
CCCCCCCCEEEEEEEEEECCEECCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECC
RTANPIL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA