Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718801

Identifier: 119718801

GI number: 119718801

Start: 4853655

End: 4855295

Strand: Reverse

Name: 119718801

Synonym: Noca_4584

Alternate gene names: NA

Gene position: 4855295-4853655 (Counterclockwise)

Preceding gene: 119718802

Following gene: 119718800

Centisome position: 97.38

GC content: 77.82

Gene sequence:

>1641_bases
ATGCTCGCCGACCTCGCCGCACCGGCCCTGGTGCTCGTCGGCCCCGGGGTCGACCTGGCGACCGGCTCCGGCCCGGTGCC
CGAGGGCGTGACCCGCGTGGCGCTCGGGGACGAGGTCCCGGACGGGGTCTGGGCCAGCGTGCTCCTGGCGGTCGCTGACG
AGGCCGCGCTGCGGGTGGCCGTCTCCCGGCTGCCCCGCCTCGGCCGGACCAAGCACGTCGGGTGCCACCTGGCGTCGGCG
ACCGGCCCGGTGACCACGGTGCTCCGTCCGGAGTGGCCGCCGCTGGCCAACCTGGTCGCGGAGACCGCGGACGGCGGCGC
GCACACCCGGCTGACCTTCCGGCGACCCGCCCCGGCCGGGCCGGTGCTCGTCGAGCTCGCACGGCACACCGGCACCCGGG
TCGTGACCGGCAACCACGGGCTGGTCGTCACCGGTGCCCCGGTGCCGGTGGACCCGACCGCCGTCACCGACGAGGTCCCG
GCCGCGGTGGTCGTCGGCGGCCGCGCCGACCTGCCCGAGCACCCGGTCCTGGGCCGGGCGCCGGTCGCGCTGCACCTGCG
CGGCGAGCCGGCCGGCCCGCTCGACGAAGCCCCCCTCGATGAGGCCCTGCTCAACCCGGTCGGCTTCCGCCGCGACTGGG
ACCGCGGGCCGGTCCCGCTGCCCGCGGGCGACCCGACCCCGGAGCTGGTCGCCGCCGTCCGCGACGCCCAGGCCGTCGTG
GTGCCCGACGACGCAGATCCCCGCACGGTGGCCGGGCTGGCGATGGCCGGTGTGCCGCTGCTCGGCGCTGGCTACCCGGG
CATCGACCCGGTCGACCCGGCCGACCTGGACGACCCGCTGCGCCGCGAGGAGCACTCGGTCCGGCTGCGCCGGGCCGCCC
TGCGCGAGCACTCGCACCTGGCCTGGCGGCACCGGGTCGCCCGGCGCGCCGGGCTGCGGGCAGCGGCGTACCCCTCGGTC
AGCGTGCTGTTGCCGACCCGCCGACCCGAGCAGCTCGCCTTCGCGCTCGACCAGGTCGCCCGCCAGCGCGGCGTCGCCGA
GCTCGAGCTGGTGCTGGCCACCCACGGGTTCGAGGCCGACCCCGGGCTGGTGCGCGAGCGGCTGGGCGAGCGGCCGGTCA
CGCTGCTGCCGCTGCCGGCCGACACGGTCTTCGGTGACGTGCTCCGCGCCGCGACCGACGCCGCCACGGGCGACGTGGTC
GTGAAGATGGACGACGACGACTGGTACGGGCCGGACCTCCTCGCCGACCTGCTGCTCGCCAAGCACTACTCCGGCGCGGA
CCTGGTCGGCACGCCCGCGGAGCTGGTCTACCTGGAGCCGATCCGCACCACCGTGCGCCGCCGCGGCCCGAGCGAGAGCT
TCGGCGCCGTGGTCGCCGGCGGCACGATGACCCTCGACCGGGCGCTGCTGCGCGCGGTGGGCGGGTTCCGCAGCGTCCCG
CGGCACGTCGACGCCCGGCTCCTCGAGGACGTCCGCGCCGCGGGGGGCAGCGTGTACCGGACCCAGGGCCTCGGGTACGT
CCTGCGGCGTACGACGCACGGCCACACCTGGGACACCGGACTCGGCTACTTCCTGACCCGGCAGAGCGTCGCCGCGCAGT
GGCGCGGCTTCCGGCCCAGCAGACTCCTGGAGGCAGGGTGA

Upstream 100 bases:

>100_bases
GTGACGCCGACGTGGTGGACCGCTGGCGGCCGCTGCTGCCGGACTTCGAGTTCGAGACGCTGCGCCTGGACAAGGGCGCG
GCCGTCCTGACCCGGACCTG

Downstream 100 bases:

>100_bases
TCGACCAGTGAGCGACCAGCCCCGGGTGCGCCGCAACGACTGGGGCACCCTCGACGCGCCCGCCCTCGGCCGGTGGGAGC
CGACCCGGTCGGTGTCCGTG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MLADLAAPALVLVGPGVDLATGSGPVPEGVTRVALGDEVPDGVWASVLLAVADEAALRVAVSRLPRLGRTKHVGCHLASA
TGPVTTVLRPEWPPLANLVAETADGGAHTRLTFRRPAPAGPVLVELARHTGTRVVTGNHGLVVTGAPVPVDPTAVTDEVP
AAVVVGGRADLPEHPVLGRAPVALHLRGEPAGPLDEAPLDEALLNPVGFRRDWDRGPVPLPAGDPTPELVAAVRDAQAVV
VPDDADPRTVAGLAMAGVPLLGAGYPGIDPVDPADLDDPLRREEHSVRLRRAALREHSHLAWRHRVARRAGLRAAAYPSV
SVLLPTRRPEQLAFALDQVARQRGVAELELVLATHGFEADPGLVRERLGERPVTLLPLPADTVFGDVLRAATDAATGDVV
VKMDDDDWYGPDLLADLLLAKHYSGADLVGTPAELVYLEPIRTTVRRRGPSESFGAVVAGGTMTLDRALLRAVGGFRSVP
RHVDARLLEDVRAAGGSVYRTQGLGYVLRRTTHGHTWDTGLGYFLTRQSVAAQWRGFRPSRLLEAG

Sequences:

>Translated_546_residues
MLADLAAPALVLVGPGVDLATGSGPVPEGVTRVALGDEVPDGVWASVLLAVADEAALRVAVSRLPRLGRTKHVGCHLASA
TGPVTTVLRPEWPPLANLVAETADGGAHTRLTFRRPAPAGPVLVELARHTGTRVVTGNHGLVVTGAPVPVDPTAVTDEVP
AAVVVGGRADLPEHPVLGRAPVALHLRGEPAGPLDEAPLDEALLNPVGFRRDWDRGPVPLPAGDPTPELVAAVRDAQAVV
VPDDADPRTVAGLAMAGVPLLGAGYPGIDPVDPADLDDPLRREEHSVRLRRAALREHSHLAWRHRVARRAGLRAAAYPSV
SVLLPTRRPEQLAFALDQVARQRGVAELELVLATHGFEADPGLVRERLGERPVTLLPLPADTVFGDVLRAATDAATGDVV
VKMDDDDWYGPDLLADLLLAKHYSGADLVGTPAELVYLEPIRTTVRRRGPSESFGAVVAGGTMTLDRALLRAVGGFRSVP
RHVDARLLEDVRAAGGSVYRTQGLGYVLRRTTHGHTWDTGLGYFLTRQSVAAQWRGFRPSRLLEAG
>Mature_546_residues
MLADLAAPALVLVGPGVDLATGSGPVPEGVTRVALGDEVPDGVWASVLLAVADEAALRVAVSRLPRLGRTKHVGCHLASA
TGPVTTVLRPEWPPLANLVAETADGGAHTRLTFRRPAPAGPVLVELARHTGTRVVTGNHGLVVTGAPVPVDPTAVTDEVP
AAVVVGGRADLPEHPVLGRAPVALHLRGEPAGPLDEAPLDEALLNPVGFRRDWDRGPVPLPAGDPTPELVAAVRDAQAVV
VPDDADPRTVAGLAMAGVPLLGAGYPGIDPVDPADLDDPLRREEHSVRLRRAALREHSHLAWRHRVARRAGLRAAAYPSV
SVLLPTRRPEQLAFALDQVARQRGVAELELVLATHGFEADPGLVRERLGERPVTLLPLPADTVFGDVLRAATDAATGDVV
VKMDDDDWYGPDLLADLLLAKHYSGADLVGTPAELVYLEPIRTTVRRRGPSESFGAVVAGGTMTLDRALLRAVGGFRSVP
RHVDARLLEDVRAAGGSVYRTQGLGYVLRRTTHGHTWDTGLGYFLTRQSVAAQWRGFRPSRLLEAG

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57710; Mature: 57710

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADLAAPALVLVGPGVDLATGSGPVPEGVTRVALGDEVPDGVWASVLLAVADEAALRVA
CCCCCCCCEEEEEECCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VSRLPRLGRTKHVGCHLASATGPVTTVLRPEWPPLANLVAETADGGAHTRLTFRRPAPAG
HHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
PVLVELARHTGTRVVTGNHGLVVTGAPVPVDPTAVTDEVPAAVVVGGRADLPEHPVLGRA
HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
PVALHLRGEPAGPLDEAPLDEALLNPVGFRRDWDRGPVPLPAGDPTPELVAAVRDAQAVV
CEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE
VPDDADPRTVAGLAMAGVPLLGAGYPGIDPVDPADLDDPLRREEHSVRLRRAALREHSHL
ECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AWRHRVARRAGLRAAAYPSVSVLLPTRRPEQLAFALDQVARQRGVAELELVLATHGFEAD
HHHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCC
PGLVRERLGERPVTLLPLPADTVFGDVLRAATDAATGDVVVKMDDDDWYGPDLLADLLLA
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
KHYSGADLVGTPAELVYLEPIRTTVRRRGPSESFGAVVAGGTMTLDRALLRAVGGFRSVP
HCCCCCCCCCCCHHEEEECHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
RHVDARLLEDVRAAGGSVYRTQGLGYVLRRTTHGHTWDTGLGYFLTRQSVAAQWRGFRPS
HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
RLLEAG
HHCCCC
>Mature Secondary Structure
MLADLAAPALVLVGPGVDLATGSGPVPEGVTRVALGDEVPDGVWASVLLAVADEAALRVA
CCCCCCCCEEEEEECCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VSRLPRLGRTKHVGCHLASATGPVTTVLRPEWPPLANLVAETADGGAHTRLTFRRPAPAG
HHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
PVLVELARHTGTRVVTGNHGLVVTGAPVPVDPTAVTDEVPAAVVVGGRADLPEHPVLGRA
HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
PVALHLRGEPAGPLDEAPLDEALLNPVGFRRDWDRGPVPLPAGDPTPELVAAVRDAQAVV
CEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE
VPDDADPRTVAGLAMAGVPLLGAGYPGIDPVDPADLDDPLRREEHSVRLRRAALREHSHL
ECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AWRHRVARRAGLRAAAYPSVSVLLPTRRPEQLAFALDQVARQRGVAELELVLATHGFEAD
HHHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCC
PGLVRERLGERPVTLLPLPADTVFGDVLRAATDAATGDVVVKMDDDDWYGPDLLADLLLA
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
KHYSGADLVGTPAELVYLEPIRTTVRRRGPSESFGAVVAGGTMTLDRALLRAVGGFRSVP
HCCCCCCCCCCCHHEEEECHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
RHVDARLLEDVRAAGGSVYRTQGLGYVLRRTTHGHTWDTGLGYFLTRQSVAAQWRGFRPS
HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
RLLEAG
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA