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The map label for this gene is 119718784

Identifier: 119718784

GI number: 119718784

Start: 4833517

End: 4834218

Strand: Reverse

Name: 119718784

Synonym: Noca_4566

Alternate gene names: NA

Gene position: 4834218-4833517 (Counterclockwise)

Preceding gene: 119718785

Following gene: 119718782

Centisome position: 96.96

GC content: 74.22

Gene sequence:

>702_bases
GTGATCACCTGGCTGCGGCGCGCGCTGTGGGAGATGGTCCCGCGCGACCACCGGGCGACGCGCGCCGCGCTGCGCCACCG
ACAGCTCGTCACCGCGGGCTTCGTGGTGCTCGGCGGCGTCGTGCTCGGGCTGTCGCTGCGCATCGAGCCCGGCAGCGCGT
GGTTCTACCCCGCGACGCTCGCTCTGGCGTCGGTGTGGGCCGTGGGCGCATTCGCCTCCGGCCCGCTCCACCTGGGCCGC
ATCGCGACCGGCGCCGCCGCCGACTCCGACGCCGTCGGGCGGCGGCCCGTGCTCACGCCGATCGCGCTCGGGATCGCGCT
GGCCGGGGTGTTCGTGGTCGGGGCGCTCGTCGTACGGCAGGTGCCATTCCTCGATGACCAGGTGCGCTCGGTCGTCGACC
ATGCCGACCAAGGCGCGTGGCCGCTGCTGGTGCTGATCACCGCGGCCAACGGCATCGCGGAGGAGCTGTTCTTCCGGGGC
GCGGCGTACGCCGCGATCCCGCGGCACCCGGTGGTGCTCACCACGATCGCGTACGCCGTGGCGACGCTCGCGACCGGCAA
CGTGATGCTGGCCTTCGCCGCGCTCCTGCTCGGCGCGCTGGTCGGGCTGGAGCGCCGCGCCTCCGGCGGCATCCTCGCCC
CGATCCTCACCCACTGCACCTGGTCGCTCACCATGCTGTTCGCCCTGCCGCTGCTCTTCTGA

Upstream 100 bases:

>100_bases
GCGTCGTTCAGCTCCGGGCGGCGTTGACCGGCACACCGGTGCAGGGGTGTGGCCGGCTCCCGATCGGGGGACAGCCACTC
CTGAGGGGGTGAGCAGACCC

Downstream 100 bases:

>100_bases
GGTGCCCGAGGCGGCGGCCGGTTTCCCCGGTGAACCGGGGAAACCGGAACTGTTGGGCCGCAACTTCGGCCGAGAAGTTC
CAGCTTTGGCCGAACAGTGC

Product: abortive infection protein

Products: NA

Alternate protein names: Integral Membrane Protein; Caax Amino Protease Family Protein; CAAX Amino Terminal Protease Family Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MITWLRRALWEMVPRDHRATRAALRHRQLVTAGFVVLGGVVLGLSLRIEPGSAWFYPATLALASVWAVGAFASGPLHLGR
IATGAAADSDAVGRRPVLTPIALGIALAGVFVVGALVVRQVPFLDDQVRSVVDHADQGAWPLLVLITAANGIAEELFFRG
AAYAAIPRHPVVLTTIAYAVATLATGNVMLAFAALLLGALVGLERRASGGILAPILTHCTWSLTMLFALPLLF

Sequences:

>Translated_233_residues
MITWLRRALWEMVPRDHRATRAALRHRQLVTAGFVVLGGVVLGLSLRIEPGSAWFYPATLALASVWAVGAFASGPLHLGR
IATGAAADSDAVGRRPVLTPIALGIALAGVFVVGALVVRQVPFLDDQVRSVVDHADQGAWPLLVLITAANGIAEELFFRG
AAYAAIPRHPVVLTTIAYAVATLATGNVMLAFAALLLGALVGLERRASGGILAPILTHCTWSLTMLFALPLLF
>Mature_233_residues
MITWLRRALWEMVPRDHRATRAALRHRQLVTAGFVVLGGVVLGLSLRIEPGSAWFYPATLALASVWAVGAFASGPLHLGR
IATGAAADSDAVGRRPVLTPIALGIALAGVFVVGALVVRQVPFLDDQVRSVVDHADQGAWPLLVLITAANGIAEELFFRG
AAYAAIPRHPVVLTTIAYAVATLATGNVMLAFAALLLGALVGLERRASGGILAPILTHCTWSLTMLFALPLLF

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24581; Mature: 24581

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITWLRRALWEMVPRDHRATRAALRHRQLVTAGFVVLGGVVLGLSLRIEPGSAWFYPATL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
ALASVWAVGAFASGPLHLGRIATGAAADSDAVGRRPVLTPIALGIALAGVFVVGALVVRQ
HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VPFLDDQVRSVVDHADQGAWPLLVLITAANGIAEELFFRGAAYAAIPRHPVVLTTIAYAV
CCCCHHHHHHHHHHCCCCCCHHHHEEHHCCHHHHHHHHHCCHHHCCCCCCHHHHHHHHHH
ATLATGNVMLAFAALLLGALVGLERRASGGILAPILTHCTWSLTMLFALPLLF
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITWLRRALWEMVPRDHRATRAALRHRQLVTAGFVVLGGVVLGLSLRIEPGSAWFYPATL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
ALASVWAVGAFASGPLHLGRIATGAAADSDAVGRRPVLTPIALGIALAGVFVVGALVVRQ
HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VPFLDDQVRSVVDHADQGAWPLLVLITAANGIAEELFFRGAAYAAIPRHPVVLTTIAYAV
CCCCHHHHHHHHHHCCCCCCHHHHEEHHCCHHHHHHHHHCCHHHCCCCCCHHHHHHHHHH
ATLATGNVMLAFAALLLGALVGLERRASGGILAPILTHCTWSLTMLFALPLLF
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA