| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is fhs
Identifier: 119718780
GI number: 119718780
Start: 4826186
End: 4827865
Strand: Reverse
Name: fhs
Synonym: Noca_4561
Alternate gene names: 119718780
Gene position: 4827865-4826186 (Counterclockwise)
Preceding gene: 119718781
Following gene: 119718779
Centisome position: 96.83
GC content: 72.08
Gene sequence:
>1680_bases GTGCTGTCCGACATCGAGATCGCCGGGGCCGCCACGCTGCGGCCGATCACCGAGGTAGCGACCGAGTCGCTCGGCATCGG GGCCGAGCACCTGGTGCCGTACGGCCACTACAAGGCGAAGGTCGGCATCACCTACCTGAACTCGCTCGCCGACCGCCCGC TCGGCCGGCTGATCCTGGTGACGGCGCTCTCGCCGACCCCGCCGGGCGAGGGGAAGACGACCACGTCGGTGGGGCTCACC GACGCGCTGCACGGGCTCGGCAAGCGGGCCATCGCGTGCCTGCGCGAGCCGTCGATGGGTCCGGTCTTCGGTCTCAAGGG CGGGGCCGCCGGCGGCGGCTACAGCCAGGTGGTGCCGATGACCGACATCAACCTGCACTTCACCGGGGACTTCGCCGCGA TCGCCGCGGCCAACAACCTGCTCGCCGCGCTGATCGACAACCACGTGCACCACGGCAACGAGCTCGACATCGACGTGCGA AGCGTGACCTGGAAGCGGGTGCTCGACACCAACGACCGCGCGCTGCGCGAGGTGGTCGTCGGGCTGGGCGGCCCGCCCAA CGGGTTCCCCCGCCAGGACGGCTTCGACATCGTGGTCGCCTCGGAGCTGATGGCGATCTTCTGCCTCACCGAGTCCTGGG CCGACCTGAAGCGCCGCATCGGCGACATCGTGATCGGCTACTCCCGTGCCGGCGCGCCGGTCACCGCCCGCGACCTCGGC GCCGACGGCGCGATGGCGGTGCTGCTGCGCGACGCGATCGCGCCGAACCTCGTGCAGACCCTCGAGGGCGCACCGGCGCT GGTCCACGGCGGGCCGTTCGCCAACATCGCACACGGCTGCAGCTCGGTGATGGCGACGCGGGCCGGCCTGCGGCTGGCCG ACTACGTCGTCACCGAGGCGGGGTTCGGGGCCGACCTCGGCGCGGAGAAGTTCATCGACATCAAGTGCCGGATGTCCGGG ATGCGCCCCGACGTCGCGGTCGTCGTCGCGACGGTGCGGGCCCTGAAGTACCACGGCGGCGTGGCCCTGGCCGACCTGGA CCGCGAAGACCTGGGCGCGGTCGAGGCCGGGATGGACAACCTGCGTCGCCACCTGGACAACCTGCGGCACCTGAACGGCG TCCCGTGCGTGGTCGCGGTCAACCGGTTCCCCACGGACACCGACCTCGAGGTGGTCAGGGTCGTCGAGCTCGCCGCGTCG TACGGCGTCCCCGCCTATCAGGCCACCCACTTCACCGACGGCGGCATCGGGGCGCAGGACCTCGCCAAGGGCGTCCTGCA GGCGCTCGAGGAGCCGGCGCGCGACGAGTTCTCCTTCACCTACCCCGACGAGCTGTCCCTGACCGAGAAGGTCGAGGCGG TCGCGACCCGGGTGTACGGCGCCGGCCAGGTCACCTGGGACGGCAAGGCGCGCAAGCGGCTGGCGCGCATCGAGCGCGAC GGGTACGGCACGCTGCCGGTCTGCGTGGCGAAGACGCAGTACTCGTTCTCGACCGACCCGGGCCTCCTCGGGGCGCCCAC CGGTCACGAGCTCCGGGTCCGCGAGGTCCGGCTGTCGGCGGGCGCGGGCTTCGTGGTGGTGATCTGCGGCGACATGATGA CCATGCCCGGCCTGCCCACGCGCCCGGCCGCGACCCGGATCGACCTCGCCGACGACGGCACGATCATCGGGCTGTCCTAG
Upstream 100 bases:
>100_bases CGGATCCGTGCCGATTCACCTACCTCGCGAGGGCGATCGGGTTAGCGTTCCCGCAGAGGCCCGGGGAGGCCCGGACCGGC GCACGAAGGAGTGCTCGACG
Downstream 100 bases:
>100_bases TGTCCTGACAGGACACTAGCTAGTGGATCCCAGCCGCTGGGCCGCCCGGAACCGATGGCGGGTCGACCTCTAGGTTGGCG CCCATGGGTGTGGTGCTGCT
Product: formate-tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MLSDIEIAGAATLRPITEVATESLGIGAEHLVPYGHYKAKVGITYLNSLADRPLGRLILVTALSPTPPGEGKTTTSVGLT DALHGLGKRAIACLREPSMGPVFGLKGGAAGGGYSQVVPMTDINLHFTGDFAAIAAANNLLAALIDNHVHHGNELDIDVR SVTWKRVLDTNDRALREVVVGLGGPPNGFPRQDGFDIVVASELMAIFCLTESWADLKRRIGDIVIGYSRAGAPVTARDLG ADGAMAVLLRDAIAPNLVQTLEGAPALVHGGPFANIAHGCSSVMATRAGLRLADYVVTEAGFGADLGAEKFIDIKCRMSG MRPDVAVVVATVRALKYHGGVALADLDREDLGAVEAGMDNLRRHLDNLRHLNGVPCVVAVNRFPTDTDLEVVRVVELAAS YGVPAYQATHFTDGGIGAQDLAKGVLQALEEPARDEFSFTYPDELSLTEKVEAVATRVYGAGQVTWDGKARKRLARIERD GYGTLPVCVAKTQYSFSTDPGLLGAPTGHELRVREVRLSAGAGFVVVICGDMMTMPGLPTRPAATRIDLADDGTIIGLS
Sequences:
>Translated_559_residues MLSDIEIAGAATLRPITEVATESLGIGAEHLVPYGHYKAKVGITYLNSLADRPLGRLILVTALSPTPPGEGKTTTSVGLT DALHGLGKRAIACLREPSMGPVFGLKGGAAGGGYSQVVPMTDINLHFTGDFAAIAAANNLLAALIDNHVHHGNELDIDVR SVTWKRVLDTNDRALREVVVGLGGPPNGFPRQDGFDIVVASELMAIFCLTESWADLKRRIGDIVIGYSRAGAPVTARDLG ADGAMAVLLRDAIAPNLVQTLEGAPALVHGGPFANIAHGCSSVMATRAGLRLADYVVTEAGFGADLGAEKFIDIKCRMSG MRPDVAVVVATVRALKYHGGVALADLDREDLGAVEAGMDNLRRHLDNLRHLNGVPCVVAVNRFPTDTDLEVVRVVELAAS YGVPAYQATHFTDGGIGAQDLAKGVLQALEEPARDEFSFTYPDELSLTEKVEAVATRVYGAGQVTWDGKARKRLARIERD GYGTLPVCVAKTQYSFSTDPGLLGAPTGHELRVREVRLSAGAGFVVVICGDMMTMPGLPTRPAATRIDLADDGTIIGLS >Mature_559_residues MLSDIEIAGAATLRPITEVATESLGIGAEHLVPYGHYKAKVGITYLNSLADRPLGRLILVTALSPTPPGEGKTTTSVGLT DALHGLGKRAIACLREPSMGPVFGLKGGAAGGGYSQVVPMTDINLHFTGDFAAIAAANNLLAALIDNHVHHGNELDIDVR SVTWKRVLDTNDRALREVVVGLGGPPNGFPRQDGFDIVVASELMAIFCLTESWADLKRRIGDIVIGYSRAGAPVTARDLG ADGAMAVLLRDAIAPNLVQTLEGAPALVHGGPFANIAHGCSSVMATRAGLRLADYVVTEAGFGADLGAEKFIDIKCRMSG MRPDVAVVVATVRALKYHGGVALADLDREDLGAVEAGMDNLRRHLDNLRHLNGVPCVVAVNRFPTDTDLEVVRVVELAAS YGVPAYQATHFTDGGIGAQDLAKGVLQALEEPARDEFSFTYPDELSLTEKVEAVATRVYGAGQVTWDGKARKRLARIERD GYGTLPVCVAKTQYSFSTDPGLLGAPTGHELRVREVRLSAGAGFVVVICGDMMTMPGLPTRPAATRIDLADDGTIIGLS
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=611, Percent_Identity=44.189852700491, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI36796743, Length=614, Percent_Identity=44.9511400651466, Blast_Score=451, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17568737, Length=608, Percent_Identity=46.2171052631579, Blast_Score=458, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17568739, Length=608, Percent_Identity=46.2171052631579, Blast_Score=458, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6319558, Length=633, Percent_Identity=41.390205371248, Blast_Score=435, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6321643, Length=628, Percent_Identity=42.0382165605096, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI62472483, Length=623, Percent_Identity=43.6597110754414, Blast_Score=457, Evalue=1e-128, Organism=Drosophila melanogaster, GI45551871, Length=623, Percent_Identity=43.6597110754414, Blast_Score=457, Evalue=1e-128, Organism=Drosophila melanogaster, GI24645718, Length=623, Percent_Identity=43.6597110754414, Blast_Score=457, Evalue=1e-128, Organism=Drosophila melanogaster, GI17137370, Length=623, Percent_Identity=43.6597110754414, Blast_Score=457, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_NOCSJ (A1SQH3)
Other databases:
- EMBL: CP000509 - RefSeq: YP_925745.1 - STRING: A1SQH3 - GeneID: 4597080 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_4561 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: VVASEVM - PhylomeDB: A1SQH3 - BioCyc: NSP35761:NOCA_4561-MONOMER - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 58922; Mature: 58922
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDIEIAGAATLRPITEVATESLGIGAEHLVPYGHYKAKVGITYLNSLADRPLGRLILV CCCCEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEE TALSPTPPGEGKTTTSVGLTDALHGLGKRAIACLREPSMGPVFGLKGGAAGGGYSQVVPM EEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEE TDINLHFTGDFAAIAAANNLLAALIDNHVHHGNELDIDVRSVTWKRVLDTNDRALREVVV EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHH GLGGPPNGFPRQDGFDIVVASELMAIFCLTESWADLKRRIGDIVIGYSRAGAPVTARDLG HCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEHHHCC ADGAMAVLLRDAIAPNLVQTLEGAPALVHGGPFANIAHGCSSVMATRAGLRLADYVVTEA CCCHHHHHHHHHHCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC GFGADLGAEKFIDIKCRMSGMRPDVAVVVATVRALKYHGGVALADLDREDLGAVEAGMDN CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH LRRHLDNLRHLNGVPCVVAVNRFPTDTDLEVVRVVELAASYGVPAYQATHFTDGGIGAQD HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH LAKGVLQALEEPARDEFSFTYPDELSLTEKVEAVATRVYGAGQVTWDGKARKRLARIERD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC GYGTLPVCVAKTQYSFSTDPGLLGAPTGHELRVREVRLSAGAGFVVVICGDMMTMPGLPT CCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCHHHCCCCCC RPAATRIDLADDGTIIGLS CCCCEEEEECCCCEEEECC >Mature Secondary Structure MLSDIEIAGAATLRPITEVATESLGIGAEHLVPYGHYKAKVGITYLNSLADRPLGRLILV CCCCEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEE TALSPTPPGEGKTTTSVGLTDALHGLGKRAIACLREPSMGPVFGLKGGAAGGGYSQVVPM EEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEE TDINLHFTGDFAAIAAANNLLAALIDNHVHHGNELDIDVRSVTWKRVLDTNDRALREVVV EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHH GLGGPPNGFPRQDGFDIVVASELMAIFCLTESWADLKRRIGDIVIGYSRAGAPVTARDLG HCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEHHHCC ADGAMAVLLRDAIAPNLVQTLEGAPALVHGGPFANIAHGCSSVMATRAGLRLADYVVTEA CCCHHHHHHHHHHCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC GFGADLGAEKFIDIKCRMSGMRPDVAVVVATVRALKYHGGVALADLDREDLGAVEAGMDN CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH LRRHLDNLRHLNGVPCVVAVNRFPTDTDLEVVRVVELAASYGVPAYQATHFTDGGIGAQD HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH LAKGVLQALEEPARDEFSFTYPDELSLTEKVEAVATRVYGAGQVTWDGKARKRLARIERD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC GYGTLPVCVAKTQYSFSTDPGLLGAPTGHELRVREVRLSAGAGFVVVICGDMMTMPGLPT CCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCHHHCCCCCC RPAATRIDLADDGTIIGLS CCCCEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA