| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is accA1 [H]
Identifier: 119718770
GI number: 119718770
Start: 4814463
End: 4816364
Strand: Reverse
Name: accA1 [H]
Synonym: Noca_4551
Alternate gene names: 119718770
Gene position: 4816364-4814463 (Counterclockwise)
Preceding gene: 119718771
Following gene: 119718769
Centisome position: 96.6
GC content: 73.08
Gene sequence:
>1902_bases GTGATCACCAGACTGCTGGTCGCCAACCGTGCCGAGATCGCCTCACGGGTGTTCCGCACCTGTCGCGGGCTCGGCATCGA GACGGTCGCGATCCACTCGGACGCGGACGCCGACCTGCCCTACGTGCGGGAGGCGGACCACGCCGTCCGCCTGCCCGGTA ACGCGCCGGCCGAGACGTACCTGCGCATCGACCTGGTGCTCGACGCCGCGCGCCGCTCCGGCGCCGACGCGATCCACCCG GGCTACGGCTTCCTCTCCGAGAACGCGGAGTTCGCACGCGCCGTGATCGACGCCGGCCTGACCTGGATCGGCCCGGCCCC GGAGTCGATCGAGGCGATGGGCTCGAAGATCCGCGCCAAGGAGATCATGAAGGCGGCCGGAGTGCCGGTGCTGGAGGCGC CGGCCGAGCCGGCCGAGGCCGACCTCCCGCTGCTGGTCAAGGCCTCGGCGGGCGGGGGCGGCCGGGGGATGCGCGTCGTG CGCACCCTCGCCGACCTGCCCGGCGAGATCGAGAAGGCCCGGGCCGAGGCGGCGTCGGCGTTCGGCGACGGCACCGTCTT CGTCGAGCCGTACGTCGAGCACGGGCGGCACGTCGAGGTCCAGGTCCTCGGCACCAGCGTGTTCGGCGACCGCGACTGCT CCCTGCAGCGCCGCCACCAGAAGGTCGTCGAGGAGGCCCCGGCACCCGGCCTCAGCGACGAGGTGCGTGCCGCCCTGCAC GACGCCGCTCGTCACGCCGCCGAGGCGATCGAGTACCGCAGCGCCGGCACCGTCGAGTTCCTCTACGACCCGGCCACCGA GCGGTTCTGGTTCCTGGAGATGAACACCCGGCTCCAGGTCGAGCACCCGGTCACCGAGCTGGTGCACGACGTCGACCTGG TGGCGTTGCAGATCCGCGACGCCGAGGCGAGCTGGTTCATGGGCTGGCCGGACCCACCGCGCAGCCACGCGATCGAGGTG CGTCTGTACGCCGAGGATCCGGCGGCCGACTACCAGCCGCAGAGTGGCCGGCTGACCACCTTCGAGATCCCCCAGGAGGA GGGCATCCGGGTCGACGCCGGCTTCGAGTCCGGCAGCGAGGTGTCGACGCACTACGACGCGATGCTGGCCAAGGTGATCG CGCACGCGCCGACCCGGCAGGCCGCCGCCCGCAGGCTCGCGAGCGTGCTGAGCCGCGCGCGGATCCACGGTGTGGTCACC AACCGGGACCAGCTCGTCCGGGTGCTGCGCGACCCGGCGTTCCTCCGCGGGGACGTGAGCACCGACTTCCTGGGTCGTGT GTCCGAGAGTGCGCCGGAGCGCACGGTGGACAGCACGACCCCGGCCGCGGTCGCGGCGGCGATCGCGCTGGCCGAGCAGG CGGTGGCGGACCGCACCGTCCAGCGCGGCATCCCGGTCGCCTGGCGCAACGTCGTCTCCCAGCCGCAGCGCACCGAGTTC GAGGGTGACGTCGTCGTGGAGTGGTGGGGCGGGCGTGACGGCTACCGGCTCGACGGCCACACGGTGGTCGCCGCGAGCCC GACCGGCGTCACCTTGGAGGCCGACGGCGTGCGCACGACGTACGTGGTCGCTGTCAACGGAGCCGATGTCGACGTCGACA GCCCACGCGGCCACGTCCGGCTGACCCGGGTGCCGCGGTTCGTGGACCCGGCCGAGCAGGTCGCCAGCGGCAGCCTGCTG GCGCCGATGCCGGGCACGGTCGTCAGCGTCGCGGTCGAGGCGGGCCAGCAGGTCGGGGCGGGCCAGTCGGTGCTGGTCCT CGAGGCGATGAAGATGCAGCACACCGTGAGCGCGCCGTACGCCGGCACGGTCACGGAGATCGACGTCAAGCCCGGTGCGC AGGTCGCCGCCGGGGAGGTTCTGGCCGTGGTGGAGCAGACCGTGGAAGAGGAGCAGCAGTGA
Upstream 100 bases:
>100_bases CTTCGCCGCGGCCCTTGTCTGTTCCGTCGGACCAGGGGCTCCTTCGTCGCCCGGTTCGACGGTCGAACGCTCGCAAGCTC GCATTCGAGGAGGTGTCGTC
Downstream 100 bases:
>100_bases GCAACTTCAGCGAGTCCCAGGAGCGCCAGGAGCTCCGCAAGGCCGTGGCCAAGCTGGCCGCCAAGTACGGTCGCGAGTGG TTCACCCGGAAGGCGCGCAG
Product: carbamoyl-phosphate synthase L chain, ATP-binding
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MITRLLVANRAEIASRVFRTCRGLGIETVAIHSDADADLPYVREADHAVRLPGNAPAETYLRIDLVLDAARRSGADAIHP GYGFLSENAEFARAVIDAGLTWIGPAPESIEAMGSKIRAKEIMKAAGVPVLEAPAEPAEADLPLLVKASAGGGGRGMRVV RTLADLPGEIEKARAEAASAFGDGTVFVEPYVEHGRHVEVQVLGTSVFGDRDCSLQRRHQKVVEEAPAPGLSDEVRAALH DAARHAAEAIEYRSAGTVEFLYDPATERFWFLEMNTRLQVEHPVTELVHDVDLVALQIRDAEASWFMGWPDPPRSHAIEV RLYAEDPAADYQPQSGRLTTFEIPQEEGIRVDAGFESGSEVSTHYDAMLAKVIAHAPTRQAAARRLASVLSRARIHGVVT NRDQLVRVLRDPAFLRGDVSTDFLGRVSESAPERTVDSTTPAAVAAAIALAEQAVADRTVQRGIPVAWRNVVSQPQRTEF EGDVVVEWWGGRDGYRLDGHTVVAASPTGVTLEADGVRTTYVVAVNGADVDVDSPRGHVRLTRVPRFVDPAEQVASGSLL APMPGTVVSVAVEAGQQVGAGQSVLVLEAMKMQHTVSAPYAGTVTEIDVKPGAQVAAGEVLAVVEQTVEEEQQ
Sequences:
>Translated_633_residues MITRLLVANRAEIASRVFRTCRGLGIETVAIHSDADADLPYVREADHAVRLPGNAPAETYLRIDLVLDAARRSGADAIHP GYGFLSENAEFARAVIDAGLTWIGPAPESIEAMGSKIRAKEIMKAAGVPVLEAPAEPAEADLPLLVKASAGGGGRGMRVV RTLADLPGEIEKARAEAASAFGDGTVFVEPYVEHGRHVEVQVLGTSVFGDRDCSLQRRHQKVVEEAPAPGLSDEVRAALH DAARHAAEAIEYRSAGTVEFLYDPATERFWFLEMNTRLQVEHPVTELVHDVDLVALQIRDAEASWFMGWPDPPRSHAIEV RLYAEDPAADYQPQSGRLTTFEIPQEEGIRVDAGFESGSEVSTHYDAMLAKVIAHAPTRQAAARRLASVLSRARIHGVVT NRDQLVRVLRDPAFLRGDVSTDFLGRVSESAPERTVDSTTPAAVAAAIALAEQAVADRTVQRGIPVAWRNVVSQPQRTEF EGDVVVEWWGGRDGYRLDGHTVVAASPTGVTLEADGVRTTYVVAVNGADVDVDSPRGHVRLTRVPRFVDPAEQVASGSLL APMPGTVVSVAVEAGQQVGAGQSVLVLEAMKMQHTVSAPYAGTVTEIDVKPGAQVAAGEVLAVVEQTVEEEQQ >Mature_633_residues MITRLLVANRAEIASRVFRTCRGLGIETVAIHSDADADLPYVREADHAVRLPGNAPAETYLRIDLVLDAARRSGADAIHP GYGFLSENAEFARAVIDAGLTWIGPAPESIEAMGSKIRAKEIMKAAGVPVLEAPAEPAEADLPLLVKASAGGGGRGMRVV RTLADLPGEIEKARAEAASAFGDGTVFVEPYVEHGRHVEVQVLGTSVFGDRDCSLQRRHQKVVEEAPAPGLSDEVRAALH DAARHAAEAIEYRSAGTVEFLYDPATERFWFLEMNTRLQVEHPVTELVHDVDLVALQIRDAEASWFMGWPDPPRSHAIEV RLYAEDPAADYQPQSGRLTTFEIPQEEGIRVDAGFESGSEVSTHYDAMLAKVIAHAPTRQAAARRLASVLSRARIHGVVT NRDQLVRVLRDPAFLRGDVSTDFLGRVSESAPERTVDSTTPAAVAAAIALAEQAVADRTVQRGIPVAWRNVVSQPQRTEF EGDVVVEWWGGRDGYRLDGHTVVAASPTGVTLEADGVRTTYVVAVNGADVDVDSPRGHVRLTRVPRFVDPAEQVASGSLL APMPGTVVSVAVEAGQQVGAGQSVLVLEAMKMQHTVSAPYAGTVTEIDVKPGAQVAAGEVLAVVEQTVEEEQQ
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=671, Percent_Identity=37.8539493293592, Blast_Score=403, Evalue=1e-112, Organism=Homo sapiens, GI189095269, Length=686, Percent_Identity=37.0262390670554, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI65506442, Length=686, Percent_Identity=37.0262390670554, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI295821183, Length=654, Percent_Identity=37.3088685015291, Blast_Score=360, Evalue=3e-99, Organism=Homo sapiens, GI106049528, Length=449, Percent_Identity=43.652561247216, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI106049295, Length=449, Percent_Identity=43.652561247216, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI106049292, Length=449, Percent_Identity=43.652561247216, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI38679974, Length=738, Percent_Identity=26.8292682926829, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI38679960, Length=738, Percent_Identity=26.8292682926829, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI38679971, Length=738, Percent_Identity=26.8292682926829, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI38679977, Length=738, Percent_Identity=26.8292682926829, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI38679967, Length=738, Percent_Identity=26.8292682926829, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI134142062, Length=715, Percent_Identity=26.4335664335664, Blast_Score=207, Evalue=3e-53, Organism=Escherichia coli, GI1789654, Length=444, Percent_Identity=43.9189189189189, Blast_Score=325, Evalue=4e-90, Organism=Caenorhabditis elegans, GI71987519, Length=661, Percent_Identity=40.393343419062, Blast_Score=401, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17567343, Length=683, Percent_Identity=36.7496339677892, Blast_Score=358, Evalue=3e-99, Organism=Caenorhabditis elegans, GI17562816, Length=446, Percent_Identity=41.9282511210762, Blast_Score=294, Evalue=7e-80, Organism=Caenorhabditis elegans, GI71997168, Length=512, Percent_Identity=28.3203125, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI133931226, Length=511, Percent_Identity=27.7886497064579, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71997163, Length=536, Percent_Identity=27.4253731343284, Blast_Score=179, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319685, Length=442, Percent_Identity=41.1764705882353, Blast_Score=345, Evalue=8e-96, Organism=Saccharomyces cerevisiae, GI6319695, Length=447, Percent_Identity=39.8210290827741, Blast_Score=281, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=41.6107382550336, Blast_Score=279, Evalue=7e-76, Organism=Saccharomyces cerevisiae, GI6323863, Length=680, Percent_Identity=27.2058823529412, Blast_Score=215, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6324343, Length=744, Percent_Identity=25.6720430107527, Blast_Score=209, Evalue=8e-55, Organism=Drosophila melanogaster, GI24651757, Length=679, Percent_Identity=37.7025036818851, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24651759, Length=636, Percent_Identity=37.1069182389937, Blast_Score=345, Evalue=6e-95, Organism=Drosophila melanogaster, GI24652212, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24652210, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24652214, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI19921944, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24652216, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI281363050, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24652224, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24652222, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24652220, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI24652218, Length=446, Percent_Identity=44.3946188340807, Blast_Score=327, Evalue=2e-89, Organism=Drosophila melanogaster, GI161076407, Length=713, Percent_Identity=27.9102384291725, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI24586460, Length=713, Percent_Identity=27.9102384291725, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI161076409, Length=713, Percent_Identity=27.9102384291725, Blast_Score=223, Evalue=5e-58, Organism=Drosophila melanogaster, GI24586458, Length=713, Percent_Identity=27.9102384291725, Blast_Score=222, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 67936; Mature: 67936
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRLLVANRAEIASRVFRTCRGLGIETVAIHSDADADLPYVREADHAVRLPGNAPAETY CCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCE LRIDLVLDAARRSGADAIHPGYGFLSENAEFARAVIDAGLTWIGPAPESIEAMGSKIRAK EEEEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHH EIMKAAGVPVLEAPAEPAEADLPLLVKASAGGGGRGMRVVRTLADLPGEIEKARAEAASA HHHHHCCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH FGDGTVFVEPYVEHGRHVEVQVLGTSVFGDRDCSLQRRHQKVVEEAPAPGLSDEVRAALH CCCCEEEEEEHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH DAARHAAEAIEYRSAGTVEFLYDPATERFWFLEMNTRLQVEHPVTELVHDVDLVALQIRD HHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCEEEECCCHHHHHHHCEEEEEEEEC AEASWFMGWPDPPRSHAIEVRLYAEDPAADYQPQSGRLTTFEIPQEEGIRVDAGFESGSE CCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCHHCCCEEECCCCCCCC VSTHYDAMLAKVIAHAPTRQAAARRLASVLSRARIHGVVTNRDQLVRVLRDPAFLRGDVS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCEECCCC TDFLGRVSESAPERTVDSTTPAAVAAAIALAEQAVADRTVQRGIPVAWRNVVSQPQRTEF HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC EGDVVVEWWGGRDGYRLDGHTVVAASPTGVTLEADGVRTTYVVAVNGADVDVDSPRGHVR CCCEEEEEECCCCCEEECCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCEE LTRVPRFVDPAEQVASGSLLAPMPGTVVSVAVEAGQQVGAGQSVLVLEAMKMQHTVSAPY EECCCCCCCHHHHHHCCCEECCCCCHHHHHHHHHCHHCCCCCEEEHHHHHHHHHHCCCCC AGTVTEIDVKPGAQVAAGEVLAVVEQTVEEEQQ CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITRLLVANRAEIASRVFRTCRGLGIETVAIHSDADADLPYVREADHAVRLPGNAPAETY CCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCE LRIDLVLDAARRSGADAIHPGYGFLSENAEFARAVIDAGLTWIGPAPESIEAMGSKIRAK EEEEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHH EIMKAAGVPVLEAPAEPAEADLPLLVKASAGGGGRGMRVVRTLADLPGEIEKARAEAASA HHHHHCCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH FGDGTVFVEPYVEHGRHVEVQVLGTSVFGDRDCSLQRRHQKVVEEAPAPGLSDEVRAALH CCCCEEEEEEHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH DAARHAAEAIEYRSAGTVEFLYDPATERFWFLEMNTRLQVEHPVTELVHDVDLVALQIRD HHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCEEEECCCHHHHHHHCEEEEEEEEC AEASWFMGWPDPPRSHAIEVRLYAEDPAADYQPQSGRLTTFEIPQEEGIRVDAGFESGSE CCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCHHCCCEEECCCCCCCC VSTHYDAMLAKVIAHAPTRQAAARRLASVLSRARIHGVVTNRDQLVRVLRDPAFLRGDVS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCEECCCC TDFLGRVSESAPERTVDSTTPAAVAAAIALAEQAVADRTVQRGIPVAWRNVVSQPQRTEF HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC EGDVVVEWWGGRDGYRLDGHTVVAASPTGVTLEADGVRTTYVVAVNGADVDVDSPRGHVR CCCEEEEEECCCCCEEECCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCEE LTRVPRFVDPAEQVASGSLLAPMPGTVVSVAVEAGQQVGAGQSVLVLEAMKMQHTVSAPY EECCCCCCCHHHHHHCCCEECCCCCHHHHHHHHHCHHCCCCCEEEHHHHHHHHHHCCCCC AGTVTEIDVKPGAQVAAGEVLAVVEQTVEEEQQ CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]