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The map label for this gene is ytcJ [H]

Identifier: 119718710

GI number: 119718710

Start: 4747691

End: 4749217

Strand: Reverse

Name: ytcJ [H]

Synonym: Noca_4491

Alternate gene names: 119718710

Gene position: 4749217-4747691 (Counterclockwise)

Preceding gene: 119718711

Following gene: 119718708

Centisome position: 95.25

GC content: 76.29

Gene sequence:

>1527_bases
GTGAGCAGCATCCTGATCCGCAACGCCCGGCTGGTGCCGATCGGCCCGGGCGCCGAGGTCCCCGACCAGCCGGTGGACGT
GGCCGTCGTGGACGGCGTGGTCACGGCGGTCGGGCCGGGTGCGGAGCGGCCCGCAGGGGCCGAGGACGTCGACGCGGCCG
GGCGCTGGCTGATCCCCGGGCTGTGGGACCAGCACGTGCACCTGGGTCAGTGGACGCTCACCTCGCAGCGCCTCGACCTG
GCCCGCGCCCGCTCGCCCGAGGACGCGACCCGGGCGGTCGCGGAGTGGATCGCGGCGTACCCGGGCCTGCCGGTCATCGG
CTGGGGGCACCGCTCCGCCGGCTGGCACCGCGAGGTCACCGTGTCGGAGCTGGACGCGGTCTCCGGAGACACCCCGGTGG
TGCTGATCAGCGGCGACGCCCACCACGCCTGGCTCAACACCACCGCGCTGATGCACCTCGCGATACCGGTGCGCGACTCG
GTGGTCCGCGAGACCGAGTGGTTCGCGGCCTACCCGCGGCTGGTGACCCTGGTCGGCAGCGACGGGACCTCCCCCGAGGC
CTACCGCCGCACCCTCGACGCGGCGGCGGCGCAGGGCGTGGTCGGCGTGGTCGACTTCGAGTTCGGCGCCAGCCGCGAGG
AGTGGGCCGAGCGCTGGGCACTGGGGTGCGACCGGCTGCGGATCCGGTGGGCGACCTACGCCGACACCCTCGACGAGGTG
ATCGCCGCCGGGCTGCGCACCGGCGACCCGCTGCCCGGCTGCGACGACCGCGCGACGATGGGGCCGCTGAAGATCATCAG
CGACGGGTCGCTGAACACCCGGACCGCCTGGTGCTGCGAGCCGTACGGCGATGCCCACCGGCTGGAGTACCCCGCCGGCC
AGCCCAACCTGGACGGCGCCGAGCTGCGCGGCCTGCTCGCCCGCGCGCACGCCGGCGGCCTCGAGGTCGCCACGCACGCG
ATCGGCGACGCGGCCGTGGCGGAGGCGCTGGCGTCGTACGCCGAGACCGGTGCCCGCGGGTCCATCGAGCACGTCCAGAT
GGCGCGCCGCGAGGACCTGCGCACCCTGGCCCGGCTCGGCCTGCGGGCCAGCGTGCAGCCGGCACACCTGCTCGACGACC
GCGACCTGACCGAGCGGATCTGGGGTGAACGGGCCGAGCGCTGCTTCGCGTTCCGGTGGATGCTCGAGGACGGTGTGCGG
CTCGCCTTCGGCTCCGACGCGCCGGTCTCCCCGCTCGACCCCTGGCTGGCGATGGCCGCGGCGGTGCACCGCAGCGCCGA
CGACCGGGACCCGTGGCGCGCCGAGCAGGCCCTGACCGTCCGGGAGGCGCTGGCGGCGTCGGTCGACGGCCAGCCGACCG
TGGGCGTGGGCTCGCCCGGCGACCTGGTGCTGCTCGACCGCGACCCGCTGCTGCCCGACCTCGATGCCGGGGACACCGCC
GGGCTCGGGACGGCGCTGCGGTCGCTCGGCTCCGCGCTCACCGTCGTGGCCGGGGTGCCGGTGCACCGATCAGCGGAGCT
CGGCTAG

Upstream 100 bases:

>100_bases
GTCCCTGACGATCACGGGGTCTGGGAGCGCTCCCACACCGCGCAAACGTCAGGGACTACCGCTCGCGGCGTCGGCCCGAC
GATGGCCTACCGTTCCGCGG

Downstream 100 bases:

>100_bases
CACGGCCTCGGCGGCCGCGCGCTGCCCGGCGGCCAGCGGGTGGTAGGCGAGCGCGGTCTCGGCGGAGGTCACCCGGCCGT
TGACCCACGGGTCGTCGGCG

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSSILIRNARLVPIGPGAEVPDQPVDVAVVDGVVTAVGPGAERPAGAEDVDAAGRWLIPGLWDQHVHLGQWTLTSQRLDL
ARARSPEDATRAVAEWIAAYPGLPVIGWGHRSAGWHREVTVSELDAVSGDTPVVLISGDAHHAWLNTTALMHLAIPVRDS
VVRETEWFAAYPRLVTLVGSDGTSPEAYRRTLDAAAAQGVVGVVDFEFGASREEWAERWALGCDRLRIRWATYADTLDEV
IAAGLRTGDPLPGCDDRATMGPLKIISDGSLNTRTAWCCEPYGDAHRLEYPAGQPNLDGAELRGLLARAHAGGLEVATHA
IGDAAVAEALASYAETGARGSIEHVQMARREDLRTLARLGLRASVQPAHLLDDRDLTERIWGERAERCFAFRWMLEDGVR
LAFGSDAPVSPLDPWLAMAAAVHRSADDRDPWRAEQALTVREALAASVDGQPTVGVGSPGDLVLLDRDPLLPDLDAGDTA
GLGTALRSLGSALTVVAGVPVHRSAELG

Sequences:

>Translated_508_residues
MSSILIRNARLVPIGPGAEVPDQPVDVAVVDGVVTAVGPGAERPAGAEDVDAAGRWLIPGLWDQHVHLGQWTLTSQRLDL
ARARSPEDATRAVAEWIAAYPGLPVIGWGHRSAGWHREVTVSELDAVSGDTPVVLISGDAHHAWLNTTALMHLAIPVRDS
VVRETEWFAAYPRLVTLVGSDGTSPEAYRRTLDAAAAQGVVGVVDFEFGASREEWAERWALGCDRLRIRWATYADTLDEV
IAAGLRTGDPLPGCDDRATMGPLKIISDGSLNTRTAWCCEPYGDAHRLEYPAGQPNLDGAELRGLLARAHAGGLEVATHA
IGDAAVAEALASYAETGARGSIEHVQMARREDLRTLARLGLRASVQPAHLLDDRDLTERIWGERAERCFAFRWMLEDGVR
LAFGSDAPVSPLDPWLAMAAAVHRSADDRDPWRAEQALTVREALAASVDGQPTVGVGSPGDLVLLDRDPLLPDLDAGDTA
GLGTALRSLGSALTVVAGVPVHRSAELG
>Mature_507_residues
SSILIRNARLVPIGPGAEVPDQPVDVAVVDGVVTAVGPGAERPAGAEDVDAAGRWLIPGLWDQHVHLGQWTLTSQRLDLA
RARSPEDATRAVAEWIAAYPGLPVIGWGHRSAGWHREVTVSELDAVSGDTPVVLISGDAHHAWLNTTALMHLAIPVRDSV
VRETEWFAAYPRLVTLVGSDGTSPEAYRRTLDAAAAQGVVGVVDFEFGASREEWAERWALGCDRLRIRWATYADTLDEVI
AAGLRTGDPLPGCDDRATMGPLKIISDGSLNTRTAWCCEPYGDAHRLEYPAGQPNLDGAELRGLLARAHAGGLEVATHAI
GDAAVAEALASYAETGARGSIEHVQMARREDLRTLARLGLRASVQPAHLLDDRDLTERIWGERAERCFAFRWMLEDGVRL
AFGSDAPVSPLDPWLAMAAAVHRSADDRDPWRAEQALTVREALAASVDGQPTVGVGSPGDLVLLDRDPLLPDLDAGDTAG
LGTALRSLGSALTVVAGVPVHRSAELG

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 54219; Mature: 54088

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILIRNARLVPIGPGAEVPDQPVDVAVVDGVVTAVGPGAERPAGAEDVDAAGRWLIPG
CCCEEEECCEEEEECCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCHHCCCCEECCC
LWDQHVHLGQWTLTSQRLDLARARSPEDATRAVAEWIAAYPGLPVIGWGHRSAGWHREVT
CCCCCEECCEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE
VSELDAVSGDTPVVLISGDAHHAWLNTTALMHLAIPVRDSVVRETEWFAAYPRLVTLVGS
HHHHHHCCCCCCEEEEECCCCCHHHHHHEEEEEEECHHHHHHHHHHHHHHCCEEEEEECC
DGTSPEAYRRTLDAAAAQGVVGVVDFEFGASREEWAERWALGCDRLRIRWATYADTLDEV
CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
IAAGLRTGDPLPGCDDRATMGPLKIISDGSLNTRTAWCCEPYGDAHRLEYPAGQPNLDGA
HHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCCHH
ELRGLLARAHAGGLEVATHAIGDAAVAEALASYAETGARGSIEHVQMARREDLRTLARLG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
LRASVQPAHLLDDRDLTERIWGERAERCFAFRWMLEDGVRLAFGSDAPVSPLDPWLAMAA
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH
AVHRSADDRDPWRAEQALTVREALAASVDGQPTVGVGSPGDLVLLDRDPLLPDLDAGDTA
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
GLGTALRSLGSALTVVAGVPVHRSAELG
HHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SSILIRNARLVPIGPGAEVPDQPVDVAVVDGVVTAVGPGAERPAGAEDVDAAGRWLIPG
CCEEEECCEEEEECCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCHHCCCCEECCC
LWDQHVHLGQWTLTSQRLDLARARSPEDATRAVAEWIAAYPGLPVIGWGHRSAGWHREVT
CCCCCEECCEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE
VSELDAVSGDTPVVLISGDAHHAWLNTTALMHLAIPVRDSVVRETEWFAAYPRLVTLVGS
HHHHHHCCCCCCEEEEECCCCCHHHHHHEEEEEEECHHHHHHHHHHHHHHCCEEEEEECC
DGTSPEAYRRTLDAAAAQGVVGVVDFEFGASREEWAERWALGCDRLRIRWATYADTLDEV
CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
IAAGLRTGDPLPGCDDRATMGPLKIISDGSLNTRTAWCCEPYGDAHRLEYPAGQPNLDGA
HHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCCHH
ELRGLLARAHAGGLEVATHAIGDAAVAEALASYAETGARGSIEHVQMARREDLRTLARLG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
LRASVQPAHLLDDRDLTERIWGERAERCFAFRWMLEDGVRLAFGSDAPVSPLDPWLAMAA
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH
AVHRSADDRDPWRAEQALTVREALAASVDGQPTVGVGSPGDLVLLDRDPLLPDLDAGDTA
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
GLGTALRSLGSALTVVAGVPVHRSAELG
HHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]