BacMap

Definition	Nocardioides sp. JS614 chromosome, complete genome.
Accession	NC_008699
Length	4,985,871

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The map label for this gene is gabD [H]

Identifier: 119718692

GI number: 119718692

Start: 4728175

End: 4729635

Strand: Reverse

Name: gabD [H]

Synonym: Noca_4473

Alternate gene names: 119718692

Gene position: 4729635-4728175 (Counterclockwise)

Preceding gene: 119718693

Following gene: 119718690

Centisome position: 94.86

GC content: 73.65

Gene sequence:

>1461_bases
ATGGCTGACTTCACCCTCGCGCAGATCCCCGACCTGCCGCTCGACCTCTGCGTCGGCGGGAAGGAGGTCCCGGCGTCCGA
CGGGGGCCGCTTCGACGTGCTCGACCCGGCCACCGGTGCCGTCCTCACCTCGGTCGCCAACGGCACGGTCGAGGACGCCC
TCGCCTGCGTCGACGCGGCCGACGCCGCCGCGGCCGCCTGGGCCGCGACCGCGCCGCGGGAGCGCTCGGAGATCCTGCGC
AAGGCCTTCGAGCTGATGCGCGAGCGCGCCGACGAGCTCGCGCACCTGATCTCCCTGGAGAACGGCAAGGCGCTGGCCGA
CGCCCGCGGCGAGGTGGCCTACGCCGCCGAGTTCTTCCGCTGGTACGCCGAGGAGGCGGTCCGCGCGGCCGGCTCCGTGA
TGACCGCGCCGTCCGGGGCCAACCGGATCGTCGTGCTCCAGCAGCCGGTCGGCATCTGCGTGCTGGTCACGCCGTGGAAC
TTCCCCGCCGCGATGGCCACCCGCAAGATCGGCCCGGCGCTGGCGGCCGGCTGCACCGTCGTGCTCAAGCCGGCCAGCGA
CACCCCGCTCACCGCGCTGCTGATGGCCAAGATCCTCGCCGACGCCGGCGTCCCCGCGGGCGTGGTCAACGTGCTGCCCG
CGCGCCGCTCGGGCGCCGTGGTGTCCGCGATGCTGCACGACCCGCGGGTCCGCAAGCTCTCCTTCACCGGCTCGACCGAG
GTCGGCCGGGTGCTGCTGCGCGAGGCCGCCGACCAGGTCGTCAACTGCTCGATGGAGCTCGGCGGCAACGCGCCGTTCAT
CGTCCTCGACGACGCCGACCTGGATGCCGCCGTCGACGGCGCGATGATCGCGAAGATGCGCAACGCCGGCGAGGCCTGCA
CCGCCGCGAACCGCTTCTATGTCCACGCCGACGTGGCCGACGAGTTCAGCCGCCGGCTCGCCGAGCGGATGGCCGCGCTG
CGGGTCGGCCCCGGCACGGCCGACGACACCGAGGTCGGCCCGCTGGTCAACGACGAGTCGGCCGCCAAGGTCGACGAGCT
GGTCCGGGGCGCGGTCTCGGCCGGCGCGCGGGTCGTGGTCGGCGGTCGCCGGCCGGAGCGCGAGGGCTACTACTACGAGC
CGACCGTGCTGCTCGACGTGCCCGTCGACGCGGAGATCCTGGGCGAGGAGATCTTCGGACCGGTCGCCCCGGTGGTGACG
TTCACCGACGAGGACGACGCGATCCGGATGGCGAACGAGACCGAGTACGGCCTGGTGTCCTACGTCTACACGCGCGACCT
GGCGCGGGGGATGCGGGTCAGCGAGCGGCTCGACTCCGGCATGGTCGGCCTCAACCGCGGGCTGGTCTCCGACCCGGCCG
CGCCGTTCGGCGGCACCAAGCAGTCCGGCGTCGGCCGCGAGGGCGGCCACGAAGGCATGCTCGACTACCTGGAGTCGAAG
TACGTCGCGGTGTCCTGGTGA

Upstream 100 bases:

>100_bases
ATCGTGATCACCGAGGACGGCCCCCGGGTGCTCACCCTCTTCCCGGCGCAGGACCTGGTCGTCGCCAACCCCTACTAGCA
GCACCCGAAAGGCAACCCCC

Downstream 100 bases:

>100_bases
GGCTGGCCAGACGATCCGGGCGGCCGGGTCGCTGGTGGCTGTGAACGGAGGACCCGCAGGAATCTGCCGCCCTTCACGGG
GACGGTATGCCAAGGCGTGA

Product: succinate semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MADFTLAQIPDLPLDLCVGGKEVPASDGGRFDVLDPATGAVLTSVANGTVEDALACVDAADAAAAAWAATAPRERSEILR
KAFELMRERADELAHLISLENGKALADARGEVAYAAEFFRWYAEEAVRAAGSVMTAPSGANRIVVLQQPVGICVLVTPWN
FPAAMATRKIGPALAAGCTVVLKPASDTPLTALLMAKILADAGVPAGVVNVLPARRSGAVVSAMLHDPRVRKLSFTGSTE
VGRVLLREAADQVVNCSMELGGNAPFIVLDDADLDAAVDGAMIAKMRNAGEACTAANRFYVHADVADEFSRRLAERMAAL
RVGPGTADDTEVGPLVNDESAAKVDELVRGAVSAGARVVVGGRRPEREGYYYEPTVLLDVPVDAEILGEEIFGPVAPVVT
FTDEDDAIRMANETEYGLVSYVYTRDLARGMRVSERLDSGMVGLNRGLVSDPAAPFGGTKQSGVGREGGHEGMLDYLESK
YVAVSW

Sequences:

>Translated_486_residues
MADFTLAQIPDLPLDLCVGGKEVPASDGGRFDVLDPATGAVLTSVANGTVEDALACVDAADAAAAAWAATAPRERSEILR
KAFELMRERADELAHLISLENGKALADARGEVAYAAEFFRWYAEEAVRAAGSVMTAPSGANRIVVLQQPVGICVLVTPWN
FPAAMATRKIGPALAAGCTVVLKPASDTPLTALLMAKILADAGVPAGVVNVLPARRSGAVVSAMLHDPRVRKLSFTGSTE
VGRVLLREAADQVVNCSMELGGNAPFIVLDDADLDAAVDGAMIAKMRNAGEACTAANRFYVHADVADEFSRRLAERMAAL
RVGPGTADDTEVGPLVNDESAAKVDELVRGAVSAGARVVVGGRRPEREGYYYEPTVLLDVPVDAEILGEEIFGPVAPVVT
FTDEDDAIRMANETEYGLVSYVYTRDLARGMRVSERLDSGMVGLNRGLVSDPAAPFGGTKQSGVGREGGHEGMLDYLESK
YVAVSW
>Mature_485_residues
ADFTLAQIPDLPLDLCVGGKEVPASDGGRFDVLDPATGAVLTSVANGTVEDALACVDAADAAAAAWAATAPRERSEILRK
AFELMRERADELAHLISLENGKALADARGEVAYAAEFFRWYAEEAVRAAGSVMTAPSGANRIVVLQQPVGICVLVTPWNF
PAAMATRKIGPALAAGCTVVLKPASDTPLTALLMAKILADAGVPAGVVNVLPARRSGAVVSAMLHDPRVRKLSFTGSTEV
GRVLLREAADQVVNCSMELGGNAPFIVLDDADLDAAVDGAMIAKMRNAGEACTAANRFYVHADVADEFSRRLAERMAALR
VGPGTADDTEVGPLVNDESAAKVDELVRGAVSAGARVVVGGRRPEREGYYYEPTVLLDVPVDAEILGEEIFGPVAPVVTF
TDEDDAIRMANETEYGLVSYVYTRDLARGMRVSERLDSGMVGLNRGLVSDPAAPFGGTKQSGVGREGGHEGMLDYLESKY
VAVSW

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=475, Percent_Identity=48.4210526315789, Blast_Score=419, Evalue=1e-117,
Organism=Homo sapiens, GI25777721, Length=488, Percent_Identity=47.1311475409836, Blast_Score=410, Evalue=1e-114,
Organism=Homo sapiens, GI21614513, Length=485, Percent_Identity=37.7319587628866, Blast_Score=304, Evalue=1e-82,
Organism=Homo sapiens, GI238814322, Length=485, Percent_Identity=35.6701030927835, Blast_Score=303, Evalue=3e-82,
Organism=Homo sapiens, GI115387104, Length=480, Percent_Identity=35.8333333333333, Blast_Score=294, Evalue=2e-79,
Organism=Homo sapiens, GI25777724, Length=475, Percent_Identity=37.6842105263158, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI21361176, Length=495, Percent_Identity=36.969696969697, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI25777730, Length=484, Percent_Identity=34.9173553719008, Blast_Score=277, Evalue=2e-74,
Organism=Homo sapiens, GI12007648, Length=483, Percent_Identity=33.7474120082816, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI153266822, Length=468, Percent_Identity=35.8974358974359, Blast_Score=275, Evalue=1e-73,
Organism=Homo sapiens, GI25777728, Length=418, Percent_Identity=38.755980861244, Blast_Score=273, Evalue=2e-73,
Organism=Homo sapiens, GI25777732, Length=465, Percent_Identity=36.3440860215054, Blast_Score=269, Evalue=4e-72,
Organism=Homo sapiens, GI25777726, Length=473, Percent_Identity=34.8837209302326, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI25952152, Length=476, Percent_Identity=32.9831932773109, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI188035924, Length=471, Percent_Identity=30.3609341825902, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI310128103, Length=463, Percent_Identity=30.8855291576674, Blast_Score=209, Evalue=7e-54,
Organism=Homo sapiens, GI310128093, Length=462, Percent_Identity=30.952380952381, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI11095441, Length=480, Percent_Identity=27.0833333333333, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI310128091, Length=407, Percent_Identity=30.958230958231, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI223972651, Length=470, Percent_Identity=30.8510638297872, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI301500698, Length=269, Percent_Identity=33.457249070632, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI310128089, Length=343, Percent_Identity=31.7784256559767, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=35.15625, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI73695881, Length=331, Percent_Identity=29.0030211480363, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI73695879, Length=331, Percent_Identity=29.0030211480363, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI310128095, Length=311, Percent_Identity=31.5112540192926, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4557303, Length=375, Percent_Identity=26.4, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI73466520, Length=375, Percent_Identity=26.4, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI4502043, Length=421, Percent_Identity=28.7410926365796, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI238814371, Length=421, Percent_Identity=28.7410926365796, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI206597441, Length=431, Percent_Identity=25.9860788863109, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI206597439, Length=431, Percent_Identity=25.9860788863109, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI22907049, Length=431, Percent_Identity=25.9860788863109, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI71773324, Length=327, Percent_Identity=29.3577981651376, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI238859541, Length=459, Percent_Identity=25.7080610021786, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI25777736, Length=459, Percent_Identity=25.7080610021786, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI25777734, Length=459, Percent_Identity=25.7080610021786, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI310128087, Length=282, Percent_Identity=30.1418439716312, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI223972653, Length=481, Percent_Identity=27.2349272349272, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI310128101, Length=238, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI310128099, Length=226, Percent_Identity=30.0884955752212, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI1789015, Length=467, Percent_Identity=49.8929336188437, Blast_Score=480, Evalue=1e-137,
Organism=Escherichia coli, GI1787684, Length=468, Percent_Identity=38.034188034188, Blast_Score=320, Evalue=1e-88,
Organism=Escherichia coli, GI87081896, Length=490, Percent_Identity=36.530612244898, Blast_Score=307, Evalue=8e-85,
Organism=Escherichia coli, GI1787715, Length=466, Percent_Identity=37.1244635193133, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1786504, Length=477, Percent_Identity=36.6876310272537, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1787558, Length=479, Percent_Identity=34.6555323590814, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI87081926, Length=451, Percent_Identity=34.1463414634146, Blast_Score=254, Evalue=9e-69,
Organism=Escherichia coli, GI87082295, Length=486, Percent_Identity=34.156378600823, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1787250, Length=467, Percent_Identity=32.5481798715203, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1788042, Length=467, Percent_Identity=29.3361884368308, Blast_Score=151, Evalue=1e-37,
Organism=Escherichia coli, GI1787653, Length=283, Percent_Identity=25.7950530035336, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17534119, Length=465, Percent_Identity=43.8709677419355, Blast_Score=373, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI133930964, Length=485, Percent_Identity=38.7628865979381, Blast_Score=311, Evalue=4e-85,
Organism=Caenorhabditis elegans, GI17562198, Length=478, Percent_Identity=36.6108786610879, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI25143874, Length=474, Percent_Identity=34.1772151898734, Blast_Score=288, Evalue=6e-78,
Organism=Caenorhabditis elegans, GI25143876, Length=474, Percent_Identity=34.1772151898734, Blast_Score=288, Evalue=6e-78,
Organism=Caenorhabditis elegans, GI25144435, Length=482, Percent_Identity=35.6846473029046, Blast_Score=274, Evalue=9e-74,
Organism=Caenorhabditis elegans, GI71995606, Length=488, Percent_Identity=33.4016393442623, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI32564736, Length=421, Percent_Identity=36.3420427553444, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17551164, Length=463, Percent_Identity=31.317494600432, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71995613, Length=427, Percent_Identity=32.7868852459016, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI115534176, Length=472, Percent_Identity=29.6610169491525, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI71986308, Length=480, Percent_Identity=27.2916666666667, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI25146391, Length=368, Percent_Identity=26.9021739130435, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI32566756, Length=368, Percent_Identity=26.9021739130435, Blast_Score=139, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI25146394, Length=368, Percent_Identity=26.9021739130435, Blast_Score=139, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17564084, Length=356, Percent_Identity=28.0898876404494, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17534447, Length=493, Percent_Identity=24.9492900608519, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI32564151, Length=462, Percent_Identity=24.2424242424242, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI115532534, Length=351, Percent_Identity=24.7863247863248, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71990744, Length=340, Percent_Identity=23.8235294117647, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319478, Length=469, Percent_Identity=42.6439232409382, Blast_Score=405, Evalue=1e-114,
Organism=Saccharomyces cerevisiae, GI6320917, Length=485, Percent_Identity=38.1443298969072, Blast_Score=326, Evalue=5e-90,
Organism=Saccharomyces cerevisiae, GI6325196, Length=479, Percent_Identity=35.9081419624217, Blast_Score=295, Evalue=1e-80,
Organism=Saccharomyces cerevisiae, GI6324950, Length=473, Percent_Identity=34.6723044397463, Blast_Score=292, Evalue=8e-80,
Organism=Saccharomyces cerevisiae, GI6323822, Length=504, Percent_Identity=34.9206349206349, Blast_Score=282, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6323821, Length=504, Percent_Identity=35.7142857142857, Blast_Score=282, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6321828, Length=475, Percent_Identity=27.3684210526316, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321826, Length=506, Percent_Identity=26.0869565217391, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323757, Length=336, Percent_Identity=25.5952380952381, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI281362580, Length=457, Percent_Identity=45.9518599562363, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI62472918, Length=457, Percent_Identity=45.9518599562363, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI62472926, Length=457, Percent_Identity=45.9518599562363, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI62472936, Length=457, Percent_Identity=45.9518599562363, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI21356737, Length=457, Percent_Identity=45.9518599562363, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI24585660, Length=484, Percent_Identity=35.9504132231405, Blast_Score=306, Evalue=2e-83,
Organism=Drosophila melanogaster, GI24650465, Length=476, Percent_Identity=36.5546218487395, Blast_Score=303, Evalue=1e-82,
Organism=Drosophila melanogaster, GI20129399, Length=483, Percent_Identity=37.0600414078675, Blast_Score=286, Evalue=2e-77,
Organism=Drosophila melanogaster, GI24666674, Length=464, Percent_Identity=28.448275862069, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24638876, Length=478, Percent_Identity=29.7071129707113, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24638878, Length=478, Percent_Identity=29.7071129707113, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI45552499, Length=341, Percent_Identity=28.4457478005865, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI281360303, Length=341, Percent_Identity=28.4457478005865, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI281360299, Length=341, Percent_Identity=28.4457478005865, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281360297, Length=341, Percent_Identity=28.4457478005865, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281360295, Length=341, Percent_Identity=28.4457478005865, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24586250, Length=341, Percent_Identity=28.4457478005865, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281360301, Length=341, Percent_Identity=28.4457478005865, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24668425, Length=486, Percent_Identity=23.0452674897119, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24668417, Length=486, Percent_Identity=23.0452674897119, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24668413, Length=486, Percent_Identity=23.0452674897119, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI28571798, Length=437, Percent_Identity=25.858123569794, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571796, Length=437, Percent_Identity=25.858123569794, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571794, Length=437, Percent_Identity=25.858123569794, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571802, Length=437, Percent_Identity=25.858123569794, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571800, Length=437, Percent_Identity=25.858123569794, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571806, Length=437, Percent_Identity=25.858123569794, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281360293, Length=165, Percent_Identity=27.8787878787879, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51150; Mature: 51018

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFTLAQIPDLPLDLCVGGKEVPASDGGRFDVLDPATGAVLTSVANGTVEDALACVDAA
CCCCCCHHCCCCCHHEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHH
DAAAAAWAATAPRERSEILRKAFELMRERADELAHLISLENGKALADARGEVAYAAEFFR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHH
WYAEEAVRAAGSVMTAPSGANRIVVLQQPVGICVLVTPWNFPAAMATRKIGPALAAGCTV
HHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCHHHHCCCEE
VLKPASDTPLTALLMAKILADAGVPAGVVNVLPARRSGAVVSAMLHDPRVRKLSFTGSTE
EEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEHHHCCCCEEEEEECCCHH
VGRVLLREAADQVVNCSMELGGNAPFIVLDDADLDAAVDGAMIAKMRNAGEACTAANRFY
HHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCEEE
VHADVADEFSRRLAERMAALRVGPGTADDTEVGPLVNDESAAKVDELVRGAVSAGARVVV
EEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
GGRRPEREGYYYEPTVLLDVPVDAEILGEEIFGPVAPVVTFTDEDDAIRMANETEYGLVS
CCCCCCCCCEEECCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCHHHH
YVYTRDLARGMRVSERLDSGMVGLNRGLVSDPAAPFGGTKQSGVGREGGHEGMLDYLESK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
YVAVSW
EEEEEC
>Mature Secondary Structure 
ADFTLAQIPDLPLDLCVGGKEVPASDGGRFDVLDPATGAVLTSVANGTVEDALACVDAA
CCCCCHHCCCCCHHEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHH
DAAAAAWAATAPRERSEILRKAFELMRERADELAHLISLENGKALADARGEVAYAAEFFR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHH
WYAEEAVRAAGSVMTAPSGANRIVVLQQPVGICVLVTPWNFPAAMATRKIGPALAAGCTV
HHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCHHHHCCCEE
VLKPASDTPLTALLMAKILADAGVPAGVVNVLPARRSGAVVSAMLHDPRVRKLSFTGSTE
EEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEHHHCCCCEEEEEECCCHH
VGRVLLREAADQVVNCSMELGGNAPFIVLDDADLDAAVDGAMIAKMRNAGEACTAANRFY
HHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCEEE
VHADVADEFSRRLAERMAALRVGPGTADDTEVGPLVNDESAAKVDELVRGAVSAGARVVV
EEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
GGRRPEREGYYYEPTVLLDVPVDAEILGEEIFGPVAPVVTFTDEDDAIRMANETEYGLVS
CCCCCCCCCEEECCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCHHHH
YVYTRDLARGMRVSERLDSGMVGLNRGLVSDPAAPFGGTKQSGVGREGGHEGMLDYLESK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
YVAVSW
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]