| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718658
Identifier: 119718658
GI number: 119718658
Start: 4692917
End: 4693330
Strand: Reverse
Name: 119718658
Synonym: Noca_4439
Alternate gene names: NA
Gene position: 4693330-4692917 (Counterclockwise)
Preceding gene: 119718659
Following gene: 119718656
Centisome position: 94.13
GC content: 73.91
Gene sequence:
>414_bases GTGCGGCAGGCTGGACCCGTGCGCTTCACCGAACACGAGCTGACCGTCGCCCTGACCGGGGCCGCCAAGAGCGTGCTCGC GACCCAGGACCGCTCGGTCCGCAAGGGGCAGCGGACCGAGGACGAGGCGTGGGAGGCGCTGTCCCGCTTCGAGCGGTTCC AGATGCTCGACGGGCTCGGCACCCAGCTGCTGCCCGCCCTGGTCGCGCTGCCGGACGTCGAGGTGACCCCGGGCGAGCGG CCGACGTTCACCGACGCGCAGGTGCGCACGGCCGTCGAGGAGCGGCTCGGTGACGAGCGCGGCGTACGTCGCAAGGCGCT GCTCACCGCACGGGTCGCGCTGGTCAAGCTGGCCCTCGAGTGCCTGCCGCCGCGCCAGGACCCGGACGCGCTGATCGTCC CCGACCACCTCTGA
Upstream 100 bases:
>100_bases GCGCAGATGTACTTCGGCGGCACCGTGTCCGGCGCCCAGGCCGAGGTCACCCCCGACATCCCGATCGCCACCTCCGGCTG AGTCGACCCCGCTGCCACTG
Downstream 100 bases:
>100_bases GGCGCTACCCCAGCGCGGCGTTGACGACCTCGCGCGCCTCCTGCTGCACCTGGGCCAGGTGGCCGGGGCCGCGGAACGAC TCGGCGTAGATCTTGTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRQAGPVRFTEHELTVALTGAAKSVLATQDRSVRKGQRTEDEAWEALSRFERFQMLDGLGTQLLPALVALPDVEVTPGER PTFTDAQVRTAVEERLGDERGVRRKALLTARVALVKLALECLPPRQDPDALIVPDHL
Sequences:
>Translated_137_residues MRQAGPVRFTEHELTVALTGAAKSVLATQDRSVRKGQRTEDEAWEALSRFERFQMLDGLGTQLLPALVALPDVEVTPGER PTFTDAQVRTAVEERLGDERGVRRKALLTARVALVKLALECLPPRQDPDALIVPDHL >Mature_137_residues MRQAGPVRFTEHELTVALTGAAKSVLATQDRSVRKGQRTEDEAWEALSRFERFQMLDGLGTQLLPALVALPDVEVTPGER PTFTDAQVRTAVEERLGDERGVRRKALLTARVALVKLALECLPPRQDPDALIVPDHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15164; Mature: 15164
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQAGPVRFTEHELTVALTGAAKSVLATQDRSVRKGQRTEDEAWEALSRFERFQMLDGLG CCCCCCCEEECCEEEEEECCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC TQLLPALVALPDVEVTPGERPTFTDAQVRTAVEERLGDERGVRRKALLTARVALVKLALE HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH CLPPRQDPDALIVPDHL HCCCCCCCCEEECCCCC >Mature Secondary Structure MRQAGPVRFTEHELTVALTGAAKSVLATQDRSVRKGQRTEDEAWEALSRFERFQMLDGLG CCCCCCCEEECCEEEEEECCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC TQLLPALVALPDVEVTPGERPTFTDAQVRTAVEERLGDERGVRRKALLTARVALVKLALE HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH CLPPRQDPDALIVPDHL HCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA