Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718567

Identifier: 119718567

GI number: 119718567

Start: 4597924

End: 4598406

Strand: Reverse

Name: 119718567

Synonym: Noca_4348

Alternate gene names: NA

Gene position: 4598406-4597924 (Counterclockwise)

Preceding gene: 119718569

Following gene: 119718566

Centisome position: 92.23

GC content: 73.91

Gene sequence:

>483_bases
ATGAACTCGTTGACGCCCGGTGCAGACCTGATGGCGGGCCCGCCGCCGATCCACCTTCCCGAGGACCCGGCGGCGGCCGA
GCTCGTCGAGGGTGCCGACGTGATGGAGGTGGTCCGCCGGCACCCGGAGTCGCCGATCGCCTGGGCGACCCTCGGCCTGC
TCCTCGCCGACCAGACCGAGGACCTCGACGACCTGGTCACCGTCTACGCCTACGCCCGGGTCGGCTACCACCGCAGCCTG
GACCAGCTGCGCCGCAACGGCTGGAAGGGCCACGGGCCGGTGCCGTGGGAGCACGAGCCCAACCGCGGCTTCCTCCAGTC
GCTGGGGCTGCTGGCGCTGGCCGCTCGCCAGATCGGCGAGACCGCGGAGTGGGAGCGGTGCGCGCAGTTCCTGCGGGACT
CCAGCCGGACGGCGTACGACGAGCTCCTCGGCGACCCGGACGGCGACCCCGACGGCGACCCCGACGGCGACCTGGACGGC
TGA

Upstream 100 bases:

>100_bases
CGGCCAGGGCTCCTTCTGCTCCGACGTCGCGGTCAGGTCCGGCGAGGGCGCGGGTCGGGTCACGAGCACACTCAACACCC
CACCGTGGACAATCGCACCC

Downstream 100 bases:

>100_bases
CCGGCGCGGGGCCGTCGGTAGCCTTGCCCGGTGACCGAGCACCCCAGCGAGCACCCGTCCGAGCACCCGTCCGAGCACCC
AGCGCCCGCCGACGACCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNSLTPGADLMAGPPPIHLPEDPAAAELVEGADVMEVVRRHPESPIAWATLGLLLADQTEDLDDLVTVYAYARVGYHRSL
DQLRRNGWKGHGPVPWEHEPNRGFLQSLGLLALAARQIGETAEWERCAQFLRDSSRTAYDELLGDPDGDPDGDPDGDLDG

Sequences:

>Translated_160_residues
MNSLTPGADLMAGPPPIHLPEDPAAAELVEGADVMEVVRRHPESPIAWATLGLLLADQTEDLDDLVTVYAYARVGYHRSL
DQLRRNGWKGHGPVPWEHEPNRGFLQSLGLLALAARQIGETAEWERCAQFLRDSSRTAYDELLGDPDGDPDGDPDGDLDG
>Mature_160_residues
MNSLTPGADLMAGPPPIHLPEDPAAAELVEGADVMEVVRRHPESPIAWATLGLLLADQTEDLDDLVTVYAYARVGYHRSL
DQLRRNGWKGHGPVPWEHEPNRGFLQSLGLLALAARQIGETAEWERCAQFLRDSSRTAYDELLGDPDGDPDGDPDGDLDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17461; Mature: 17461

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLTPGADLMAGPPPIHLPEDPAAAELVEGADVMEVVRRHPESPIAWATLGLLLADQTE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
DLDDLVTVYAYARVGYHRSLDQLRRNGWKGHGPVPWEHEPNRGFLQSLGLLALAARQIGE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
TAEWERCAQFLRDSSRTAYDELLGDPDGDPDGDPDGDLDG
CCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSLTPGADLMAGPPPIHLPEDPAAAELVEGADVMEVVRRHPESPIAWATLGLLLADQTE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
DLDDLVTVYAYARVGYHRSLDQLRRNGWKGHGPVPWEHEPNRGFLQSLGLLALAARQIGE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
TAEWERCAQFLRDSSRTAYDELLGDPDGDPDGDPDGDLDG
CCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA