Click here to switch to the map view.

The map label for this gene is 119718565

Identifier: 119718565

GI number: 119718565

Start: 4595163

End: 4596155

Strand: Reverse

Name: 119718565

Synonym: Noca_4346

Alternate gene names: NA

Gene position: 4596155-4595163 (Counterclockwise)

Preceding gene: 119718566

Following gene: 119718563

Centisome position: 92.18

GC content: 74.72

Gene sequence:

>993_bases
ATGGCTCGTTCCGAACCGACCACCGTGCTCACGGCCCTCGGGTTCAGTCCGGCCGTCGAGCGCACCTACGAACGCGTCGT
GCGCCACTCCGGACAGCGGCTGCCCTTCGTGGCCGCGGCGGTGCTGCGCACGCCCGAGCAGCTGCTCGCCGACCTGGAGC
CCCTGATCGACCGGGGCATCGTGCAGGTCGAGGACGAGCGGGTGCACGTCGAGGCGCCGGCGCGGGCGCTGGCCCGGCTG
ATCGTCGAGCTGAGCGCGACCGCGTCGCAGGCGCACGCCGACGTGGCGCAGCTGGCCCGCGCCGTACCCCTCCTCGTCGC
CGGCGCCGCCCGTCCGGCCGAGGGCGAGGTGCACGACGTCCGGCCGATCGACGGCGAGATCAGCTCCGGCGGCCACCCGG
GCCCGCTGATCACCGCCCTCATCCAGCACAGCAAGGGCGACCTCGCTTGGCTGCGTCCGGACCAGTGGCGGGTGCACCGG
GAGGGGCGGATGCTCGAGGTCGTGCGCGACCTGGTCGCCTCCGGACGACGGTCCCGGGCGATCTACCCGGTCCGGGTGCT
CCGCGAGGCGCCGGAGGTCGTGCGGGCGCGAGCCGCGGTCGGCGAGGAGATCCGGGTGCTCCCGGACGTCCCGACCCGGA
TGTTCGTCATCGGCACCACGCACGCCGTGGTGCCCGAGCCGCTCGGGTTCGTCGACGAGCCGCGCACCCTGGTGCGCCAG
CAAGGGCTCGTGGAGGCGCTCGCGCTGCTCTTCGAGATGCTCTGGGAGCGGGCGTCCACCGTCCCCGAGCTCGAGCAGGG
GGAGCCGCGCTCGGACCTGCGACGCTTCCTCCTGCAGCAGCTCGCCACCGGAGCCCAGGACGAGCTGATCGCCCGCAAGC
TCGGCCTGAGCCTGCGCACCGTGCGCCGCCGGGTCGCGGGGCTGATGAGCGAGCTCGGCGCCGACTCCCGCTTCCAGGCC
GGTGTCGAGGCGGTACGCCGCGGCTGGCTCTGA

Upstream 100 bases:

>100_bases
GCCCCGAGATCGGTGCGCGGCCGTGGCGCGTGCCGGGATCATGGCACTGACCGTTCCGTGCCAGCCGGAGAGAAGTTGCC
GCTGGCACTAAGATGCCACG

Downstream 100 bases:

>100_bases
TGAACCCGCCGACCCCGGTAGCAGGCGTGAGCAAAGTGCGGTGGCTGGGATGAGCCTGGTTGATCCCAGCCACCGCACTC
TCGAGAAGGGGCGGCCAGCA

Product: helix-turn-helix, type 11 domain-containing protein

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein LuxR; Transcriptional Regulator LuxR Family; Regulatory Protein; Regulatory Protein A; Response Regulator Receiver Protein; Helix-Turn-Helix Type

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MARSEPTTVLTALGFSPAVERTYERVVRHSGQRLPFVAAAVLRTPEQLLADLEPLIDRGIVQVEDERVHVEAPARALARL
IVELSATASQAHADVAQLARAVPLLVAGAARPAEGEVHDVRPIDGEISSGGHPGPLITALIQHSKGDLAWLRPDQWRVHR
EGRMLEVVRDLVASGRRSRAIYPVRVLREAPEVVRARAAVGEEIRVLPDVPTRMFVIGTTHAVVPEPLGFVDEPRTLVRQ
QGLVEALALLFEMLWERASTVPELEQGEPRSDLRRFLLQQLATGAQDELIARKLGLSLRTVRRRVAGLMSELGADSRFQA
GVEAVRRGWL

Sequences:

>Translated_330_residues
MARSEPTTVLTALGFSPAVERTYERVVRHSGQRLPFVAAAVLRTPEQLLADLEPLIDRGIVQVEDERVHVEAPARALARL
IVELSATASQAHADVAQLARAVPLLVAGAARPAEGEVHDVRPIDGEISSGGHPGPLITALIQHSKGDLAWLRPDQWRVHR
EGRMLEVVRDLVASGRRSRAIYPVRVLREAPEVVRARAAVGEEIRVLPDVPTRMFVIGTTHAVVPEPLGFVDEPRTLVRQ
QGLVEALALLFEMLWERASTVPELEQGEPRSDLRRFLLQQLATGAQDELIARKLGLSLRTVRRRVAGLMSELGADSRFQA
GVEAVRRGWL
>Mature_329_residues
ARSEPTTVLTALGFSPAVERTYERVVRHSGQRLPFVAAAVLRTPEQLLADLEPLIDRGIVQVEDERVHVEAPARALARLI
VELSATASQAHADVAQLARAVPLLVAGAARPAEGEVHDVRPIDGEISSGGHPGPLITALIQHSKGDLAWLRPDQWRVHRE
GRMLEVVRDLVASGRRSRAIYPVRVLREAPEVVRARAAVGEEIRVLPDVPTRMFVIGTTHAVVPEPLGFVDEPRTLVRQQ
GLVEALALLFEMLWERASTVPELEQGEPRSDLRRFLLQQLATGAQDELIARKLGLSLRTVRRRVAGLMSELGADSRFQAG
VEAVRRGWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36321; Mature: 36190

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSEPTTVLTALGFSPAVERTYERVVRHSGQRLPFVAAAVLRTPEQLLADLEPLIDRGI
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCC
VQVEDERVHVEAPARALARLIVELSATASQAHADVAQLARAVPLLVAGAARPAEGEVHDV
EEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RPIDGEISSGGHPGPLITALIQHSKGDLAWLRPDQWRVHREGRMLEVVRDLVASGRRSRA
CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCC
IYPVRVLREAPEVVRARAAVGEEIRVLPDVPTRMFVIGTTHAVVPEPLGFVDEPRTLVRQ
CHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCHHHCCCCCCCCCCHHHHHHH
QGLVEALALLFEMLWERASTVPELEQGEPRSDLRRFLLQQLATGAQDELIARKLGLSLRT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHH
VRRRVAGLMSELGADSRFQAGVEAVRRGWL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARSEPTTVLTALGFSPAVERTYERVVRHSGQRLPFVAAAVLRTPEQLLADLEPLIDRGI
CCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCC
VQVEDERVHVEAPARALARLIVELSATASQAHADVAQLARAVPLLVAGAARPAEGEVHDV
EEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RPIDGEISSGGHPGPLITALIQHSKGDLAWLRPDQWRVHREGRMLEVVRDLVASGRRSRA
CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCC
IYPVRVLREAPEVVRARAAVGEEIRVLPDVPTRMFVIGTTHAVVPEPLGFVDEPRTLVRQ
CHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCHHHCCCCCCCCCCHHHHHHH
QGLVEALALLFEMLWERASTVPELEQGEPRSDLRRFLLQQLATGAQDELIARKLGLSLRT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHH
VRRRVAGLMSELGADSRFQAGVEAVRRGWL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA