| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718510
Identifier: 119718510
GI number: 119718510
Start: 4533106
End: 4533459
Strand: Reverse
Name: 119718510
Synonym: Noca_4291
Alternate gene names: NA
Gene position: 4533459-4533106 (Counterclockwise)
Preceding gene: 119718511
Following gene: 119718508
Centisome position: 90.93
GC content: 68.93
Gene sequence:
>354_bases ATGCCGATCGAGATGGCGCCCGAGGAGTTCGACGCGCTGGTCGACCGCGCCCTCGACGAGATCCCCGACGAGATCGCCGC GCTGGTCCGCAACGTGGTCGTGCTGGTCGAGGCCGAGGCGCCGCCGGACGATCCGGACCTGCTCGGGCTCTACGACGGGA TCGCGCTGACCGAGCGGTGGGGCAACCCGATGATGGAGCTGCCGGACCGGATCCTGATCTTCCGGGGTCCGCTGCTCGAC ATGTGCGACACCGAGGAGCAGCTGGTCGACGAGGTGCGGATCACGGTGGTGCACGAGATCGCCCACCACTTCGGGATCGA CGACGACCGGCTGCACGACCTCGGGTACGCCTGA
Upstream 100 bases:
>100_bases TGCTGTAACGCCCGGTTACCCTTTCCTCCGACCCTGATGCAGCAGGGTGGGTAGCAGGGGTAACACGGCGTTACAGCGAG TGGCGGGGGACAATGACCCC
Downstream 100 bases:
>100_bases GCCACCTGCGGCACGGCTGCGGCCCAGGCTCCGGCGTACTCCTCAGCGACGGTGGGTCGGTGCGGTCGCTCCCGAGCTCG CCTCGTCGGAGGCCATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERWGNPMMELPDRILIFRGPLLD MCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA
Sequences:
>Translated_117_residues MPIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERWGNPMMELPDRILIFRGPLLD MCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA >Mature_116_residues PIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERWGNPMMELPDRILIFRGPLLDM CDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA
Specific function: Unknown
COG id: COG3824
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13187; Mature: 13056
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERW CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHCHHHHHHC GNPMMELPDRILIFRGPLLDMCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA CCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC >Mature Secondary Structure PIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERW CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHCHHHHHHC GNPMMELPDRILIFRGPLLDMCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA CCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA