Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718510

Identifier: 119718510

GI number: 119718510

Start: 4533106

End: 4533459

Strand: Reverse

Name: 119718510

Synonym: Noca_4291

Alternate gene names: NA

Gene position: 4533459-4533106 (Counterclockwise)

Preceding gene: 119718511

Following gene: 119718508

Centisome position: 90.93

GC content: 68.93

Gene sequence:

>354_bases
ATGCCGATCGAGATGGCGCCCGAGGAGTTCGACGCGCTGGTCGACCGCGCCCTCGACGAGATCCCCGACGAGATCGCCGC
GCTGGTCCGCAACGTGGTCGTGCTGGTCGAGGCCGAGGCGCCGCCGGACGATCCGGACCTGCTCGGGCTCTACGACGGGA
TCGCGCTGACCGAGCGGTGGGGCAACCCGATGATGGAGCTGCCGGACCGGATCCTGATCTTCCGGGGTCCGCTGCTCGAC
ATGTGCGACACCGAGGAGCAGCTGGTCGACGAGGTGCGGATCACGGTGGTGCACGAGATCGCCCACCACTTCGGGATCGA
CGACGACCGGCTGCACGACCTCGGGTACGCCTGA

Upstream 100 bases:

>100_bases
TGCTGTAACGCCCGGTTACCCTTTCCTCCGACCCTGATGCAGCAGGGTGGGTAGCAGGGGTAACACGGCGTTACAGCGAG
TGGCGGGGGACAATGACCCC

Downstream 100 bases:

>100_bases
GCCACCTGCGGCACGGCTGCGGCCCAGGCTCCGGCGTACTCCTCAGCGACGGTGGGTCGGTGCGGTCGCTCCCGAGCTCG
CCTCGTCGGAGGCCATCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MPIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERWGNPMMELPDRILIFRGPLLD
MCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA

Sequences:

>Translated_117_residues
MPIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERWGNPMMELPDRILIFRGPLLD
MCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA
>Mature_116_residues
PIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERWGNPMMELPDRILIFRGPLLDM
CDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA

Specific function: Unknown

COG id: COG3824

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13187; Mature: 13056

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERW
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHCHHHHHHC
GNPMMELPDRILIFRGPLLDMCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA
CCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure 
PIEMAPEEFDALVDRALDEIPDEIAALVRNVVVLVEAEAPPDDPDLLGLYDGIALTERW
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHCHHHHHHC
GNPMMELPDRILIFRGPLLDMCDTEEQLVDEVRITVVHEIAHHFGIDDDRLHDLGYA
CCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA