| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718383
Identifier: 119718383
GI number: 119718383
Start: 4397589
End: 4398023
Strand: Reverse
Name: 119718383
Synonym: Noca_4164
Alternate gene names: NA
Gene position: 4398023-4397589 (Counterclockwise)
Preceding gene: 119718384
Following gene: 119718382
Centisome position: 88.21
GC content: 78.85
Gene sequence:
>435_bases GTGCCGGCCGGGTGGGAGGTCCACGACCGGCCCGCCGAGGGCGCCCTCCTGGTGGTCCGGGAGCCGGCGGGCGCCGACCC GCCGGCGTTCCGCGCCAACCTGGTGGTCACCGCCGTGCCGGTCGGCGGGCTGTCCTTCCGCGACTGGCAGGCCGGCAGCG ACGAGATCCTCGCCCGGGCGCTGGAGGACTACCTGCTCGTCGACCTGGAGCGGCTGTCGGTCGGTGGGCGGCCGGGGGGC CGCCGGCTCGCCCACCACGCCGGCCCGCGCGGCGAGGCGCTCACCCTGGAGCAGTGGGTCACCCTGGTCGACGGCGTCGG CCACACCCTGACCGCGACCGTGGCCACCGGCCGGTACGACGAGCTCGCCGACCTGCTCGCCACCGCCGCGGCCAGCTGGC GGCCGGACCCGCTCGGGGGCACCGGTGCGCGTTGA
Upstream 100 bases:
>100_bases CCGATCCCGGTGCCGGGGTTCCTCGAGCCGGGGTGGTGCCGCGAGAGCCGGGCCCGGGGGCGGGCGCATGCCGGGTGAGG GCGGGGCCGGGCTCCTCGAC
Downstream 100 bases:
>100_bases CCTCGACCCCGGCTCCGGCGTGCTCCGGCTCGACGACGCCGGGTTCGCCGCGCTCGTGGCCGCGACCGCGCCGGGCCGAC CGGCTCCGGCCGCCGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPAGWEVHDRPAEGALLVVREPAGADPPAFRANLVVTAVPVGGLSFRDWQAGSDEILARALEDYLLVDLERLSVGGRPGG RRLAHHAGPRGEALTLEQWVTLVDGVGHTLTATVATGRYDELADLLATAAASWRPDPLGGTGAR
Sequences:
>Translated_144_residues MPAGWEVHDRPAEGALLVVREPAGADPPAFRANLVVTAVPVGGLSFRDWQAGSDEILARALEDYLLVDLERLSVGGRPGG RRLAHHAGPRGEALTLEQWVTLVDGVGHTLTATVATGRYDELADLLATAAASWRPDPLGGTGAR >Mature_143_residues PAGWEVHDRPAEGALLVVREPAGADPPAFRANLVVTAVPVGGLSFRDWQAGSDEILARALEDYLLVDLERLSVGGRPGGR RLAHHAGPRGEALTLEQWVTLVDGVGHTLTATVATGRYDELADLLATAAASWRPDPLGGTGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15149; Mature: 15018
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGWEVHDRPAEGALLVVREPAGADPPAFRANLVVTAVPVGGLSFRDWQAGSDEILARA CCCCCCCCCCCCCCEEEEEECCCCCCCCCEECEEEEEEECCCCCCCCCCCCCHHHHHHHH LEDYLLVDLERLSVGGRPGGRRLAHHAGPRGEALTLEQWVTLVDGVGHTLTATVATGRYD HHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCHH ELADLLATAAASWRPDPLGGTGAR HHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PAGWEVHDRPAEGALLVVREPAGADPPAFRANLVVTAVPVGGLSFRDWQAGSDEILARA CCCCCCCCCCCCCEEEEEECCCCCCCCCEECEEEEEEECCCCCCCCCCCCCHHHHHHHH LEDYLLVDLERLSVGGRPGGRRLAHHAGPRGEALTLEQWVTLVDGVGHTLTATVATGRYD HHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCHH ELADLLATAAASWRPDPLGGTGAR HHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA