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The map label for this gene is tcsA [H]

Identifier: 119718367

GI number: 119718367

Start: 4382242

End: 4383315

Strand: Reverse

Name: tcsA [H]

Synonym: Noca_4148

Alternate gene names: 119718367

Gene position: 4383315-4382242 (Counterclockwise)

Preceding gene: 119718370

Following gene: 119718366

Centisome position: 87.91

GC content: 68.9

Gene sequence:

>1074_bases
ATGCTCGCGCACCCCGTTCGAGACCGTCGCCCGTCGCAGCTCCGCACTGGAGCCGGCCTGCTGGTCACCGTGGCCGTCCT
CGCCCTCACTGCCGCCTGCGGAGGGACCACGGGCGACGAAGGCTCCGACAGCGCCGGTGGCGACCTGCCCCTGGTGTACG
GCGTGTTCGCCACCCCGCTCGAGGAGCCCTGGGACGGCGCCATCCACGCGGCGCTTGAGTCCGCGGCCGCGGACGGGCTG
ATCGAGTACAAGCACGTCGACGACCTCAGCACCTCCGACGCCATGGAGCGGTCGCTGCGCGACATCGCCACCAACGAGAA
GCCGGACGCGATCATCGGGGACGCGTTCGCCGCCGAGGAGGCGGTCCGCAAGGTAGCTGCCGAGTTCCCGGACATCCCGT
TCGCCTTCGGATCCGGTGGCGAGCCGGTGGAGCCGAACATGAGCGTCTTCGACAACTGGCTCCAAGACCCCGCCTACCTG
GCGGGCATGCTGGCCGGCGGTCTGACCGAGAGTGGAACGATCGGGGTGGTCGGCGCCATGCCGATTCCGGAGGTGAACCG
GATCGTCAACGCCTTCGTCCTCGGTGTGAAGGAGACCAACCCCGACGCGACGGTCAAGGTGTCGTTCATCAACAGCTTCT
TCGACCCGGCCGCGGCCAAGCAGGCCGCGCAGGCCCACATCTCGGCCGGAGCCGACGTCCTCTTCGCCGAGCGCGACGGA
GTTATCGCCGCCGCGGAGGAGGCCGACATCCCGGTCATCGGAATGATGGTCGACCAGAAGGCCGAGTCGCCCGAGCACGT
CGTGACGTCCCTGATCTGGGACGTCCGGCCGACGGTCGACGCGGTGGTCGACCAGATCGAGAACGGTCCCGAAGGAGTCG
ACCTCGGCAAGTACTCCTTCATGGCGGCCGGTGGCTCGTCCATCGCCGACATCAACACCGACATCGTCGGCGGGGTCCCC
GACGACCTGGCCGCTCGCGTCGAGGACATGCGCGCCGCCATGGAGGACGGCACCTTCGAGACACCTGTGGACGAGAGCGC
GCCGGCGAAGTCGATCGACGTCTCCGCGAAGTGA

Upstream 100 bases:

>100_bases
ACCAGTACGGGGGGACACGAAATGACGAAATGCCCCTTGTGACGGCCGCGGGTGGGCCGTTTGACTGCCCTGCATCACCC
GCACCACGCCGGAGGTCCTC

Downstream 100 bases:

>100_bases
GCGGACCAGGGGCGAGCAGTGGGCCGTTGAGGGGCCCGCTGCTCGAGCTCGACGGCCTGACCAAGCGATTCGGGGAGCTG
GTCGCGAACAACGCCATCTC

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MLAHPVRDRRPSQLRTGAGLLVTVAVLALTAACGGTTGDEGSDSAGGDLPLVYGVFATPLEEPWDGAIHAALESAAADGL
IEYKHVDDLSTSDAMERSLRDIATNEKPDAIIGDAFAAEEAVRKVAAEFPDIPFAFGSGGEPVEPNMSVFDNWLQDPAYL
AGMLAGGLTESGTIGVVGAMPIPEVNRIVNAFVLGVKETNPDATVKVSFINSFFDPAAAKQAAQAHISAGADVLFAERDG
VIAAAEEADIPVIGMMVDQKAESPEHVVTSLIWDVRPTVDAVVDQIENGPEGVDLGKYSFMAAGGSSIADINTDIVGGVP
DDLAARVEDMRAAMEDGTFETPVDESAPAKSIDVSAK

Sequences:

>Translated_357_residues
MLAHPVRDRRPSQLRTGAGLLVTVAVLALTAACGGTTGDEGSDSAGGDLPLVYGVFATPLEEPWDGAIHAALESAAADGL
IEYKHVDDLSTSDAMERSLRDIATNEKPDAIIGDAFAAEEAVRKVAAEFPDIPFAFGSGGEPVEPNMSVFDNWLQDPAYL
AGMLAGGLTESGTIGVVGAMPIPEVNRIVNAFVLGVKETNPDATVKVSFINSFFDPAAAKQAAQAHISAGADVLFAERDG
VIAAAEEADIPVIGMMVDQKAESPEHVVTSLIWDVRPTVDAVVDQIENGPEGVDLGKYSFMAAGGSSIADINTDIVGGVP
DDLAARVEDMRAAMEDGTFETPVDESAPAKSIDVSAK
>Mature_357_residues
MLAHPVRDRRPSQLRTGAGLLVTVAVLALTAACGGTTGDEGSDSAGGDLPLVYGVFATPLEEPWDGAIHAALESAAADGL
IEYKHVDDLSTSDAMERSLRDIATNEKPDAIIGDAFAAEEAVRKVAAEFPDIPFAFGSGGEPVEPNMSVFDNWLQDPAYL
AGMLAGGLTESGTIGVVGAMPIPEVNRIVNAFVLGVKETNPDATVKVSFINSFFDPAAAKQAAQAHISAGADVLFAERDG
VIAAAEEADIPVIGMMVDQKAESPEHVVTSLIWDVRPTVDAVVDQIENGPEGVDLGKYSFMAAGGSSIADINTDIVGGVP
DDLAARVEDMRAAMEDGTFETPVDESAPAKSIDVSAK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 37049; Mature: 37049

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAHPVRDRRPSQLRTGAGLLVTVAVLALTAACGGTTGDEGSDSAGGDLPLVYGVFATPL
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHCCC
EEPWDGAIHAALESAAADGLIEYKHVDDLSTSDAMERSLRDIATNEKPDAIIGDAFAAEE
CCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AVRKVAAEFPDIPFAFGSGGEPVEPNMSVFDNWLQDPAYLAGMLAGGLTESGTIGVVGAM
HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECC
PIPEVNRIVNAFVLGVKETNPDATVKVSFINSFFDPAAAKQAAQAHISAGADVLFAERDG
CCHHHHHHHHHHHEECCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCC
VIAAAEEADIPVIGMMVDQKAESPEHVVTSLIWDVRPTVDAVVDQIENGPEGVDLGKYSF
EEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEE
MAAGGSSIADINTDIVGGVPDDLAARVEDMRAAMEDGTFETPVDESAPAKSIDVSAK
EECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAHPVRDRRPSQLRTGAGLLVTVAVLALTAACGGTTGDEGSDSAGGDLPLVYGVFATPL
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHCCC
EEPWDGAIHAALESAAADGLIEYKHVDDLSTSDAMERSLRDIATNEKPDAIIGDAFAAEE
CCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AVRKVAAEFPDIPFAFGSGGEPVEPNMSVFDNWLQDPAYLAGMLAGGLTESGTIGVVGAM
HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECC
PIPEVNRIVNAFVLGVKETNPDATVKVSFINSFFDPAAAKQAAQAHISAGADVLFAERDG
CCHHHHHHHHHHHEECCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCC
VIAAAEEADIPVIGMMVDQKAESPEHVVTSLIWDVRPTVDAVVDQIENGPEGVDLGKYSF
EEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEE
MAAGGSSIADINTDIVGGVPDDLAARVEDMRAAMEDGTFETPVDESAPAKSIDVSAK
EECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]