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The map label for this gene is 119718336

Identifier: 119718336

GI number: 119718336

Start: 4348035

End: 4349210

Strand: Reverse

Name: 119718336

Synonym: Noca_4117

Alternate gene names: NA

Gene position: 4349210-4348035 (Counterclockwise)

Preceding gene: 119718346

Following gene: 119718335

Centisome position: 87.23

GC content: 68.11

Gene sequence:

>1176_bases
GTGTCTCGATCGCCTTTCTCTCTCGCCGTGGCCGGCGTGTTCGTCCTCGGATCCCTGACCGCCTGCGGCGCCAACGCCGA
CAGTGCCTCCGGCGGCGACTGCGTCGTCAAGATCGGCTCGATCTTCAGCCAGACCGGCGCCGCCGCGGCCTTCGGCGGTG
ACGGCGAGCGTGCGATCGAGCTCGCGATCAAGGACGCCAACAAGGAGGGCTTCCAGGTCGACGGCAAGGACTGCACGATC
GACTACAAGGCCGTGGATCTCGCGAGCGACCCGAACAAGTCGGCCTCGCTCGCCCAGGACCTGATCGCCGGCTTCGGCGC
CAAGTTCGTCTTCGGGCCCGACATGGCCGCCGCAGTCCCGCCGGCCGCGACCGCGGTCGAGCGCGCCGGCAACGTGATGA
TGCTGTCGGTCTCGACCGGCATGGACGCCTACGCCGGCAAGGACGGCCCGTTCTTCCGGCTGTCGCCGAACGACCAGACG
ATGGTCAATGACGGCTACATCCCGGCGGCCGCCGAACAGCTCGGCGACGTGCAGGACATCGCGATGCTGATGACCGACGA
CGACACCGGGAAGGCGCTCGCCGAGGGCTACGCCGCGTCGTTCGCCGACAACGGCATCACCGTCTCGCAGACCGAGTTCT
ACGACCCGACGTCGACCAACTTCGCGCCGATCGTGCAGCGCATCGACGACGACGTCCAGGGCATCTTCATCGGCTACAAC
AACGACAGCACGGCTGCGGCGATCATGGACGCCGCCGCGGAGGCCGGACTCCCACAGGTCTACATCACCCGGGGCATCTC
GGCGCAGCCCGGCGTCGCCCGCGAGGACGGGCTCGACGCCTATACCTGGCTGGTGCTCGGTGCCGACCCGCTGTACCCGG
CCGACGAGGAGCAGGAGCAGTTCATCGCCAAGTTCACCGACGCGTACGACGTCCCGGACGGCCAGATGACCTACTTCCCG
TTCGTCCACTACGACTACGTCGGAATGCTGATCCAGGCGATGGAGAAGGCCGGCACCACCACGGACGTCGAGGCGATCTC
GGCCGCGCTCCGCGGTTCGTCGTACGACGGCGTGGTCCAGCTCTCCTTCGACGATGCCGGGTTGAACACCAGCCCGATGG
GCCTGGGCATCCTCCGGGACGGGCAAGGCGAGGTCGTGTCGTTCGGGGGGCGGTGA

Upstream 100 bases:

>100_bases
ATACTGAATTGAAGTTGACGTCGGAATCATATTGATGGTGTGATCTGGGTCCCAGCCGTGCGTGCCCGGCGCACGACCAA
CGCCTCAGCAGGAGCCCATC

Downstream 100 bases:

>100_bases
CCCAATGGACTACACGCTGGCCGACATGGTCGGCATGGTCGCCCGCAGTCGCCCCGACCAGGTGGCGGCGACGGTGCTCG
GCGAGGAGACGACGACGTAC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSRSPFSLAVAGVFVLGSLTACGANADSASGGDCVVKIGSIFSQTGAAAAFGGDGERAIELAIKDANKEGFQVDGKDCTI
DYKAVDLASDPNKSASLAQDLIAGFGAKFVFGPDMAAAVPPAATAVERAGNVMMLSVSTGMDAYAGKDGPFFRLSPNDQT
MVNDGYIPAAAEQLGDVQDIAMLMTDDDTGKALAEGYAASFADNGITVSQTEFYDPTSTNFAPIVQRIDDDVQGIFIGYN
NDSTAAAIMDAAAEAGLPQVYITRGISAQPGVAREDGLDAYTWLVLGADPLYPADEEQEQFIAKFTDAYDVPDGQMTYFP
FVHYDYVGMLIQAMEKAGTTTDVEAISAALRGSSYDGVVQLSFDDAGLNTSPMGLGILRDGQGEVVSFGGR

Sequences:

>Translated_391_residues
MSRSPFSLAVAGVFVLGSLTACGANADSASGGDCVVKIGSIFSQTGAAAAFGGDGERAIELAIKDANKEGFQVDGKDCTI
DYKAVDLASDPNKSASLAQDLIAGFGAKFVFGPDMAAAVPPAATAVERAGNVMMLSVSTGMDAYAGKDGPFFRLSPNDQT
MVNDGYIPAAAEQLGDVQDIAMLMTDDDTGKALAEGYAASFADNGITVSQTEFYDPTSTNFAPIVQRIDDDVQGIFIGYN
NDSTAAAIMDAAAEAGLPQVYITRGISAQPGVAREDGLDAYTWLVLGADPLYPADEEQEQFIAKFTDAYDVPDGQMTYFP
FVHYDYVGMLIQAMEKAGTTTDVEAISAALRGSSYDGVVQLSFDDAGLNTSPMGLGILRDGQGEVVSFGGR
>Mature_390_residues
SRSPFSLAVAGVFVLGSLTACGANADSASGGDCVVKIGSIFSQTGAAAAFGGDGERAIELAIKDANKEGFQVDGKDCTID
YKAVDLASDPNKSASLAQDLIAGFGAKFVFGPDMAAAVPPAATAVERAGNVMMLSVSTGMDAYAGKDGPFFRLSPNDQTM
VNDGYIPAAAEQLGDVQDIAMLMTDDDTGKALAEGYAASFADNGITVSQTEFYDPTSTNFAPIVQRIDDDVQGIFIGYNN
DSTAAAIMDAAAEAGLPQVYITRGISAQPGVAREDGLDAYTWLVLGADPLYPADEEQEQFIAKFTDAYDVPDGQMTYFPF
VHYDYVGMLIQAMEKAGTTTDVEAISAALRGSSYDGVVQLSFDDAGLNTSPMGLGILRDGQGEVVSFGGR

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40698; Mature: 40567

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSPFSLAVAGVFVLGSLTACGANADSASGGDCVVKIGSIFSQTGAAAAFGGDGERAIE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHCCCCEEECCCCCEEEE
LAIKDANKEGFQVDGKDCTIDYKAVDLASDPNKSASLAQDLIAGFGAKFVFGPDMAAAVP
EEEECCCCCCCEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHCC
PAATAVERAGNVMMLSVSTGMDAYAGKDGPFFRLSPNDQTMVNDGYIPAAAEQLGDVQDI
CHHHHHHHCCCEEEEEECCCCCHHCCCCCCEEEECCCCCEEEECCCCCHHHHHHCCHHHE
AMLMTDDDTGKALAEGYAASFADNGITVSQTEFYDPTSTNFAPIVQRIDDDVQGIFIGYN
EEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEC
NDSTAAAIMDAAAEAGLPQVYITRGISAQPGVAREDGLDAYTWLVLGADPLYPADEEQEQ
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH
FIAKFTDAYDVPDGQMTYFPFVHYDYVGMLIQAMEKAGTTTDVEAISAALRGSSYDGVVQ
HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE
LSFDDAGLNTSPMGLGILRDGQGEVVSFGGR
EEECCCCCCCCCCCEEEEECCCCCEEEECCC
>Mature Secondary Structure 
SRSPFSLAVAGVFVLGSLTACGANADSASGGDCVVKIGSIFSQTGAAAAFGGDGERAIE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHCCCCEEECCCCCEEEE
LAIKDANKEGFQVDGKDCTIDYKAVDLASDPNKSASLAQDLIAGFGAKFVFGPDMAAAVP
EEEECCCCCCCEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHCC
PAATAVERAGNVMMLSVSTGMDAYAGKDGPFFRLSPNDQTMVNDGYIPAAAEQLGDVQDI
CHHHHHHHCCCEEEEEECCCCCHHCCCCCCEEEECCCCCEEEECCCCCHHHHHHCCHHHE
AMLMTDDDTGKALAEGYAASFADNGITVSQTEFYDPTSTNFAPIVQRIDDDVQGIFIGYN
EEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEC
NDSTAAAIMDAAAEAGLPQVYITRGISAQPGVAREDGLDAYTWLVLGADPLYPADEEQEQ
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH
FIAKFTDAYDVPDGQMTYFPFVHYDYVGMLIQAMEKAGTTTDVEAISAALRGSSYDGVVQ
HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE
LSFDDAGLNTSPMGLGILRDGQGEVVSFGGR
EEECCCCCCCCCCCEEEEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA