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The map label for this gene is gcdC [H]

Identifier: 119718327

GI number: 119718327

Start: 4340894

End: 4341112

Strand: Reverse

Name: gcdC [H]

Synonym: Noca_4108

Alternate gene names: 119718327

Gene position: 4341112-4340894 (Counterclockwise)

Preceding gene: 119718328

Following gene: 119718326

Centisome position: 87.07

GC content: 71.23

Gene sequence:

>219_bases
GTGAGGCACGAGGTCGTGGCCGAGCTGCCCGGCAACATCTGGAAGATCGAGGTGGAGCCGGGCGCCAGGGTCGAGCCGGG
GCACTGCCTGCTGGTCATGGAGACCATGAAGATGGAGATCCCCGTCCACGCCGAGACCGCCGCGCTGGTCGCGGAGGTCC
GGGTGGCGCCAGGCGACCAGGTCGCGGCGGGGGACGTGCTGGTGGTGCTGGCACCGTGA

Upstream 100 bases:

>100_bases
GCTGCTGGTCAGCCGCCACTAATGAACTTGACGTCAGTGTCAATTCAGCCTACGCTCGGGCCATGACCGAGACAGTCCGG
CGAGTCAGGACCGCGCAGCC

Downstream 100 bases:

>100_bases
CGATGAAGAGGGATGGACGATGAGCGAGCCGATGGTGCTCAATGACGTCGTTGGTGCCGTGCAGGTGATCTCGCTGAACC
GGCCCGACCGGCTCAACGCG

Product: biotin/lipoyl attachment domain-containing protein

Products: NA

Alternate protein names: Biotin carrier [H]

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MRHEVVAELPGNIWKIEVEPGARVEPGHCLLVMETMKMEIPVHAETAALVAEVRVAPGDQVAAGDVLVVLAP

Sequences:

>Translated_72_residues
MRHEVVAELPGNIWKIEVEPGARVEPGHCLLVMETMKMEIPVHAETAALVAEVRVAPGDQVAAGDVLVVLAP
>Mature_72_residues
MRHEVVAELPGNIWKIEVEPGARVEPGHCLLVMETMKMEIPVHAETAALVAEVRVAPGDQVAAGDVLVVLAP

Specific function: Biotin carrier subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD) [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: =4.1.1.70 [H]

Molecular weight: Translated: 7691; Mature: 7691

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHEVVAELPGNIWKIEVEPGARVEPGHCLLVMETMKMEIPVHAETAALVAEVRVAPGDQ
CCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCC
VAAGDVLVVLAP
CCCCCEEEEEEC
>Mature Secondary Structure
MRHEVVAELPGNIWKIEVEPGARVEPGHCLLVMETMKMEIPVHAETAALVAEVRVAPGDQ
CCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCC
VAAGDVLVVLAP
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10027965 [H]