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The map label for this gene is braC [H]

Identifier: 119718324

GI number: 119718324

Start: 4336855

End: 4338078

Strand: Reverse

Name: braC [H]

Synonym: Noca_4105

Alternate gene names: 119718324

Gene position: 4338078-4336855 (Counterclockwise)

Preceding gene: 119718325

Following gene: 119718323

Centisome position: 87.01

GC content: 65.36

Gene sequence:

>1224_bases
ATGAAACGAATGTCAGGACTTGTATGCCTTCTCGTGCTGGGGCTCGCGCTGGCCGCCTGCGGCTCGGGCGGCTCCGACGG
AAACGACGGTTCGGACTCGGGCCCCGTCAAGATCGCCATCGTCGAGCCGTTCAGCGGCGACTTCGGGTACTTCGGTGACT
TCCTCAAGAACTCCCTGCAATACCAGGTGGACAAGATCAACGCGGACGGGGGACTCCTCGGCCGGCAGCTCGAGGTCATC
ACGCGTGACGACCAGATCCAGGCGCAGCCGACCGTGACGGCGGTCCGTGAGTTGAGCGACGACCCGTCGGTCGGGCTCAT
CGTCGGCCCCTCTTTCAGCTTCCTCTACAACGCCGCTCGCCCGATCTACGACGCGAAGCAGCAGCTCAACTGCCCGCTCT
CGGTCGACTCGTCAGACTCGGTAGCCGGCGCGAAGTACACGTTCCGCGCGGGCCCGTTCAACAACCTGTTCATCACGGCC
CTGCTGAAGTACTTCCAGGACTCAGGCACCGTCAAGTCGGTCGGGGTCGTGTACGCCAACGACGACACCGGCCAGGCCAC
CGACAAGGAGTTCGCTGAGCTCGCTCCGGAGTACGGGATCGACTACCTCGGTGCCGAGCTCTACAACGCCGACGCCTCGA
ACCAGCTCGCGCAGTTCAACAAGCTCAAGGATGCAGACGCCATCTACATCAGCGCTGACGCAGCCGCCGCGGCCCAATCC
GCCATCTCGGCCGGCGACGTGGGCTACGACGGCATCCTCGTGGGCGGCGATGGCCTGCAGAGCTATGCGTTCGTCGACGG
CGCGGGTGATGCTGCGGAGGGCACGGTGTTCTCGTCCGAGCCGCTGCTGAACATGACGAAGATCCCTGACAGCGAGTGGC
CGACCGCCTACGCCGCGTTCATCAAGAAGGCCACTTCGGACTACGGCGTCCAGACCGGCCCGAAGAGCGGGGTCACCCAG
CTCAAGGCGACCCCACTGGCGACGGCGTGTGTCGTGGCCTGGGCCAAGGCCGTCGAGGAGGCCGGCACGTTCGACGACAC
GAAGGTCGCCGAGGCGTGGGAGGGACTGTCCGTCCCCGCGTCGGAGAACCCGGCAGGCATCCCGCTCCAGTTCAGTGCGG
ACAACCACGACTTCTTCCACGATCCGGAGCAGCTCGCCGTCTACCAGTGGGTGCACGATGGAGACTCCTGGTACCTGGAG
ACGTTGGCGGACGCAAGCGAGTAA

Upstream 100 bases:

>100_bases
CGGTCGGAGTGTGTTGACACGTCGGCCCGGCGGTGCGAAAGTTCTCTCACTGAAACAAGGTTCCGTTACACGGAACAATC
GACTTCGAGGTGGGGCGGAC

Downstream 100 bases:

>100_bases
GTCGAGTCGGCATGCCGGGTCCAGGTCCCTCCGGAACCTGGACCCGGCAGCCGGTCACGTCCTGATTGGCAAAGAGAGGT
GGTGATCCACTCGTGGGAAC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKRMSGLVCLLVLGLALAACGSGGSDGNDGSDSGPVKIAIVEPFSGDFGYFGDFLKNSLQYQVDKINADGGLLGRQLEVI
TRDDQIQAQPTVTAVRELSDDPSVGLIVGPSFSFLYNAARPIYDAKQQLNCPLSVDSSDSVAGAKYTFRAGPFNNLFITA
LLKYFQDSGTVKSVGVVYANDDTGQATDKEFAELAPEYGIDYLGAELYNADASNQLAQFNKLKDADAIYISADAAAAAQS
AISAGDVGYDGILVGGDGLQSYAFVDGAGDAAEGTVFSSEPLLNMTKIPDSEWPTAYAAFIKKATSDYGVQTGPKSGVTQ
LKATPLATACVVAWAKAVEEAGTFDDTKVAEAWEGLSVPASENPAGIPLQFSADNHDFFHDPEQLAVYQWVHDGDSWYLE
TLADASE

Sequences:

>Translated_407_residues
MKRMSGLVCLLVLGLALAACGSGGSDGNDGSDSGPVKIAIVEPFSGDFGYFGDFLKNSLQYQVDKINADGGLLGRQLEVI
TRDDQIQAQPTVTAVRELSDDPSVGLIVGPSFSFLYNAARPIYDAKQQLNCPLSVDSSDSVAGAKYTFRAGPFNNLFITA
LLKYFQDSGTVKSVGVVYANDDTGQATDKEFAELAPEYGIDYLGAELYNADASNQLAQFNKLKDADAIYISADAAAAAQS
AISAGDVGYDGILVGGDGLQSYAFVDGAGDAAEGTVFSSEPLLNMTKIPDSEWPTAYAAFIKKATSDYGVQTGPKSGVTQ
LKATPLATACVVAWAKAVEEAGTFDDTKVAEAWEGLSVPASENPAGIPLQFSADNHDFFHDPEQLAVYQWVHDGDSWYLE
TLADASE
>Mature_407_residues
MKRMSGLVCLLVLGLALAACGSGGSDGNDGSDSGPVKIAIVEPFSGDFGYFGDFLKNSLQYQVDKINADGGLLGRQLEVI
TRDDQIQAQPTVTAVRELSDDPSVGLIVGPSFSFLYNAARPIYDAKQQLNCPLSVDSSDSVAGAKYTFRAGPFNNLFITA
LLKYFQDSGTVKSVGVVYANDDTGQATDKEFAELAPEYGIDYLGAELYNADASNQLAQFNKLKDADAIYISADAAAAAQS
AISAGDVGYDGILVGGDGLQSYAFVDGAGDAAEGTVFSSEPLLNMTKIPDSEWPTAYAAFIKKATSDYGVQTGPKSGVTQ
LKATPLATACVVAWAKAVEEAGTFDDTKVAEAWEGLSVPASENPAGIPLQFSADNHDFFHDPEQLAVYQWVHDGDSWYLE
TLADASE

Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 42947; Mature: 42947

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMSGLVCLLVLGLALAACGSGGSDGNDGSDSGPVKIAIVEPFSGDFGYFGDFLKNSLQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCE
YQVDKINADGGLLGRQLEVITRDDQIQAQPTVTAVRELSDDPSVGLIVGPSFSFLYNAAR
EEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHCC
PIYDAKQQLNCPLSVDSSDSVAGAKYTFRAGPFNNLFITALLKYFQDSGTVKSVGVVYAN
CHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEC
DDTGQATDKEFAELAPEYGIDYLGAELYNADASNQLAQFNKLKDADAIYISADAAAAAQS
CCCCCCCHHHHHHHCHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHH
AISAGDVGYDGILVGGDGLQSYAFVDGAGDAAEGTVFSSEPLLNMTKIPDSEWPTAYAAF
HHHCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCEECCCCCCEEECCCCCCCCHHHHHH
IKKATSDYGVQTGPKSGVTQLKATPLATACVVAWAKAVEEAGTFDDTKVAEAWEGLSVPA
HHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
SENPAGIPLQFSADNHDFFHDPEQLAVYQWVHDGDSWYLETLADASE
CCCCCCCEEEECCCCCCCCCCHHHEEEEEEEECCCCHHHHHHHCCCC
>Mature Secondary Structure
MKRMSGLVCLLVLGLALAACGSGGSDGNDGSDSGPVKIAIVEPFSGDFGYFGDFLKNSLQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCE
YQVDKINADGGLLGRQLEVITRDDQIQAQPTVTAVRELSDDPSVGLIVGPSFSFLYNAAR
EEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHCC
PIYDAKQQLNCPLSVDSSDSVAGAKYTFRAGPFNNLFITALLKYFQDSGTVKSVGVVYAN
CHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEC
DDTGQATDKEFAELAPEYGIDYLGAELYNADASNQLAQFNKLKDADAIYISADAAAAAQS
CCCCCCCHHHHHHHCHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHH
AISAGDVGYDGILVGGDGLQSYAFVDGAGDAAEGTVFSSEPLLNMTKIPDSEWPTAYAAF
HHHCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCEECCCCCCEEECCCCCCCCHHHHHH
IKKATSDYGVQTGPKSGVTQLKATPLATACVVAWAKAVEEAGTFDDTKVAEAWEGLSVPA
HHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
SENPAGIPLQFSADNHDFFHDPEQLAVYQWVHDGDSWYLETLADASE
CCCCCCCEEEECCCCCCCCCCHHHEEEEEEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2509433; 2120183; 10984043 [H]