| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is eutB [H]
Identifier: 119718253
GI number: 119718253
Start: 4257727
End: 4259094
Strand: Reverse
Name: eutB [H]
Synonym: Noca_4034
Alternate gene names: 119718253
Gene position: 4259094-4257727 (Counterclockwise)
Preceding gene: 119718254
Following gene: 119718252
Centisome position: 85.42
GC content: 66.3
Gene sequence:
>1368_bases ATGCAGCTAGCCGCAACGCTGTTCGGCACCCGCTACCAGTTCCGCGACATCAAGGACCTGCTGGCCAAGGCCAACGAGGA GAAGTCGGGTGACCGGCTCGCCGGCGTCGCCGCCGACAGTGCGGCGGAGCGGATGGCGGCCAGGTTCGTCCTCAGCGAGG TCACCCTGGAGACCCTGCGCGCCAACCCGGCCGTCCCGTACGAGGAGGACGAGGTCACGCGGGTGATCGACGACGGCGTG AACGAAGCGGTCTACGCGGAGATCAAGGGCATGCAGGTCGGTGAGCTGCGCGAGTGGCTGCTGGCCGATACGACCACCGG CGAGATGATCCGCCGGCTCAGCAACGGACTGACCGCCGAGATGGTCGCCGCGGTCACCAAGCTGATGTCGAACCTGGACC TGATGCTGGCGGCCAGCAAGATCAAGATCGTCAAGCACGCCAACAACACCATCGGTCTGCGCGGCACGCTCGCGTCGCGC TGCCAGCCCAACAACCAGACCGACTCCGTCGAGGGCATCCGAGCCGCCGTCTACGAGGGTCTCAGCTTCGGTTCGGGCGA CAGCGTGATCGGCATCAACCCCTCCGACGACTCGCTCGGGAGCGTCTCCCGGCTGTTGGAGATGACCCACGAGGTCATCA CCCGATGGGAGATCCCCACGCAGAACTGCGTGCTCGCCCATGTGTCCACCCAGATGGAGGCGATGCGTCACGGCGCACCG GTCGGCCTGGTCTTCCAGAGCCTCGCGGGCTCGCAGAAGGGCAACGAGTCGTTCGGCATCGACGTGGGGATGCTCGACGA GGCCTACGCCCTGGCCAAGCGGTACTCGGTCGCCACCGGCCCGAACTACATGTACTTCGAGACGGGTCAGGGATCGGAGC TGTCCGCGGACGCTCACCACGGTGCCGACCAGGTTGTCATGGAAGCCCGCTGCTACGGGCTGGCCAAGCGCTACGACCCC TTCCAGCTCAACACGGTGGTCGGCTTCATCGGCCCGGAGTACCTCTACGACTCGACCCAGATCACCCGGGCCGGCCTCGA GGACCACTTCATGGGCAAGCTCACCGGCATCTCCATGGGCGCCGACGTCTGCTACACGAACCACGCTCGGTCCACCCAGA ACGAGCTGGAGAACCTGGCCGTGCTGCTCGGGGCTGCCGGCGTCAACTTCATCATGGGCATCCCGATGGGTGACGACTCC ATGCTGAGCTACCAGAGCTCCAGCTTCCACGACGCGCCCAGCCTCCGGCAGCTGCTGGGACTGCGCCCACTGCCGGAGTT CGAGGCCTGGATGGAAGGCCTCGGGTTGCTGCGCGATGGCCGACTGACCGAGAAGGCAGGCGACGCCTCCTTCTTCTTGA GCAGGTAG
Upstream 100 bases:
>100_bases CATCGGCCTGCCCGTTCTCGACGGCCGCGCCGTCCCGTTGTCCATCAAGACGCTGGTCTTCTATGACTGACCTCGTCGTT CCGCGAAGGAGCGCCCCCCG
Downstream 100 bases:
>100_bases GAGAGATGAGCGCGATGTCGACCGACGAGCTCCGCAGCATCGTCGCGGAGGTCCTCGCCGAGCTTGCGGAGCCCGGTGAC GCCTTCGCCCGCCTCACCAC
Product: ethanolamine ammonia-lyase heavy chain
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MQLAATLFGTRYQFRDIKDLLAKANEEKSGDRLAGVAADSAAERMAARFVLSEVTLETLRANPAVPYEEDEVTRVIDDGV NEAVYAEIKGMQVGELREWLLADTTTGEMIRRLSNGLTAEMVAAVTKLMSNLDLMLAASKIKIVKHANNTIGLRGTLASR CQPNNQTDSVEGIRAAVYEGLSFGSGDSVIGINPSDDSLGSVSRLLEMTHEVITRWEIPTQNCVLAHVSTQMEAMRHGAP VGLVFQSLAGSQKGNESFGIDVGMLDEAYALAKRYSVATGPNYMYFETGQGSELSADAHHGADQVVMEARCYGLAKRYDP FQLNTVVGFIGPEYLYDSTQITRAGLEDHFMGKLTGISMGADVCYTNHARSTQNELENLAVLLGAAGVNFIMGIPMGDDS MLSYQSSSFHDAPSLRQLLGLRPLPEFEAWMEGLGLLRDGRLTEKAGDASFFLSR
Sequences:
>Translated_455_residues MQLAATLFGTRYQFRDIKDLLAKANEEKSGDRLAGVAADSAAERMAARFVLSEVTLETLRANPAVPYEEDEVTRVIDDGV NEAVYAEIKGMQVGELREWLLADTTTGEMIRRLSNGLTAEMVAAVTKLMSNLDLMLAASKIKIVKHANNTIGLRGTLASR CQPNNQTDSVEGIRAAVYEGLSFGSGDSVIGINPSDDSLGSVSRLLEMTHEVITRWEIPTQNCVLAHVSTQMEAMRHGAP VGLVFQSLAGSQKGNESFGIDVGMLDEAYALAKRYSVATGPNYMYFETGQGSELSADAHHGADQVVMEARCYGLAKRYDP FQLNTVVGFIGPEYLYDSTQITRAGLEDHFMGKLTGISMGADVCYTNHARSTQNELENLAVLLGAAGVNFIMGIPMGDDS MLSYQSSSFHDAPSLRQLLGLRPLPEFEAWMEGLGLLRDGRLTEKAGDASFFLSR >Mature_455_residues MQLAATLFGTRYQFRDIKDLLAKANEEKSGDRLAGVAADSAAERMAARFVLSEVTLETLRANPAVPYEEDEVTRVIDDGV NEAVYAEIKGMQVGELREWLLADTTTGEMIRRLSNGLTAEMVAAVTKLMSNLDLMLAASKIKIVKHANNTIGLRGTLASR CQPNNQTDSVEGIRAAVYEGLSFGSGDSVIGINPSDDSLGSVSRLLEMTHEVITRWEIPTQNCVLAHVSTQMEAMRHGAP VGLVFQSLAGSQKGNESFGIDVGMLDEAYALAKRYSVATGPNYMYFETGQGSELSADAHHGADQVVMEARCYGLAKRYDP FQLNTVVGFIGPEYLYDSTQITRAGLEDHFMGKLTGISMGADVCYTNHARSTQNELENLAVLLGAAGVNFIMGIPMGDDS MLSYQSSSFHDAPSLRQLLGLRPLPEFEAWMEGLGLLRDGRLTEKAGDASFFLSR
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=453, Percent_Identity=58.2781456953642, Blast_Score=563, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 49422; Mature: 49422
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLAATLFGTRYQFRDIKDLLAKANEEKSGDRLAGVAADSAAERMAARFVLSEVTLETLR CCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ANPAVPYEEDEVTRVIDDGVNEAVYAEIKGMQVGELREWLLADTTTGEMIRRLSNGLTAE CCCCCCCCCHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHH MVAAVTKLMSNLDLMLAASKIKIVKHANNTIGLRGTLASRCQPNNQTDSVEGIRAAVYEG HHHHHHHHHHCCHHEEEHHHEEEEEECCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHC LSFGSGDSVIGINPSDDSLGSVSRLLEMTHEVITRWEIPTQNCVLAHVSTQMEAMRHGAP CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCC VGLVFQSLAGSQKGNESFGIDVGMLDEAYALAKRYSVATGPNYMYFETGQGSELSADAHH HHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHC GADQVVMEARCYGLAKRYDPFQLNTVVGFIGPEYLYDSTQITRAGLEDHFMGKLTGISMG CHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHCCCHHHHCCCHHHHHHHHCCCCCC ADVCYTNHARSTQNELENLAVLLGAAGVNFIMGIPMGDDSMLSYQSSSFHDAPSLRQLLG CCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCCHHHHHHHC LRPLPEFEAWMEGLGLLRDGRLTEKAGDASFFLSR CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MQLAATLFGTRYQFRDIKDLLAKANEEKSGDRLAGVAADSAAERMAARFVLSEVTLETLR CCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ANPAVPYEEDEVTRVIDDGVNEAVYAEIKGMQVGELREWLLADTTTGEMIRRLSNGLTAE CCCCCCCCCHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHH MVAAVTKLMSNLDLMLAASKIKIVKHANNTIGLRGTLASRCQPNNQTDSVEGIRAAVYEG HHHHHHHHHHCCHHEEEHHHEEEEEECCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHC LSFGSGDSVIGINPSDDSLGSVSRLLEMTHEVITRWEIPTQNCVLAHVSTQMEAMRHGAP CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCC VGLVFQSLAGSQKGNESFGIDVGMLDEAYALAKRYSVATGPNYMYFETGQGSELSADAHH HHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHC GADQVVMEARCYGLAKRYDPFQLNTVVGFIGPEYLYDSTQITRAGLEDHFMGKLTGISMG CHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHCCCHHHHCCCHHHHHHHHCCCCCC ADVCYTNHARSTQNELENLAVLLGAAGVNFIMGIPMGDDSMLSYQSSSFHDAPSLRQLLG CCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCCHHHHHHHC LRPLPEFEAWMEGLGLLRDGRLTEKAGDASFFLSR CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]