| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718238
Identifier: 119718238
GI number: 119718238
Start: 4243634
End: 4245076
Strand: Reverse
Name: 119718238
Synonym: Noca_4019
Alternate gene names: NA
Gene position: 4245076-4243634 (Counterclockwise)
Preceding gene: 119718239
Following gene: 119718237
Centisome position: 85.14
GC content: 73.39
Gene sequence:
>1443_bases GTGCTGGCCAGCCACGACGCCGTGCTGCGTCCCACGTTCTCGGGCCACGTGGTGCTGCGCACCGGCCCGGTGATCCCCGA CGTCCGGGTCGACGCCCCCGGCGTCCTCGGCGTCGACATCCGGCTCGGCAAGACCGACGCCACCTCCACCGACGAGCTCC TCCAGCGCTACGCCGCGATCGCCGGCCAGCCCGAGGGCCAGGTCGCGAAGGTCACCCACGCGGTGCGGGACATGGCGCTG AGTGCGGCCCTCCGCGGCGCGGTCCTCGGGCTGCCGCCGGTGCTCGGGTGGGCGTTGGTTGGTGCCGCGCGCCGCCGCGA GCTCGCCGCCCGCGTGCATCCGCCGCACCTGGTGCTGCTGAGCGTGGGCGTCGTGCTGGTCGGCCTGGCGCTGTGGCAGC CGTGGCTCGGCGACGACGACATCGAGGACGTGCACCGGGACTGGATCCCGCTGGGGGAGTTCCTCGGGTCCGGCGTACCC CTGCCCGACGAGGCGGACGGCGTCGAGGTGAGCGGCGACGTCACCACCAAGCAGACCCGCCGGCTGATCGAGAGCGCCGT CGACACCTACAACACCAGCAAGGACTTCTACGCGCAGGCCGCGGAGGACGCCGCGCGGCTCGGGCTGCGCCATCCGGTCG AGGGGGACACCGTGGTGGCCTTCGTCTCCGACCGGCACGACAACATCGGCATGGACAAGGTCGCCCGGGCGATCGCCGAC CGGGCGGGCGCGACCGCGGTCTTCGACGGCGGTGACGACACCTCCTCCGGCAACAGCTGGGAGGCGTTCTCCCTCGACTC GGTGAGCGAGGCCTTCGACGGGCTGGACCGGTGGGGCGTGGCCGGCAACCACGACCACGGCGACTTCGTGCACTCCTACC TCGCCGACCACGGCTGGACGATGCTCGACGGCGAGGTCGTCGAGGGCCCGGGCGGTACGACGATCCTCGGCGTGGACGAC CCGCGCTCCAGCGGGCTCGGGAACTGGCGCGACGAGACCGGCCTGACCTTCGACGAGGTCGAGCAGCGGCTCACCGACGC CGCGTGTGAAGCCGAGGAGCGGGTCGACACGATCCTGGTCCACGACGCCAACCTCGGCGACGAGGCGCTGGCCCGCGGCT GCGCCGACCTGGTGATCGGCGGCCACCTGCACGTGCGCCAGGGGCCCGACCGGATCATCGGCAGCAACGGCGAGGTCGGC TACAGCTACACGACCGGGACGGCCGGGGGCGCGGCGTACGCCTTCGCGCTCGGGAGCAAGCCCCGGCGTGCGGCCGACAT CAGCCTGATCACCTACCACGGTGGCCGCCCGGTCGGCATCCAGTGGGTGACGCTGCAGACCGACGGCAGCTACGAGACCG GCAACTACGTGCCGCTGCACCTGCCCGAGGACCCGCCGGAGGTCGTCGAGGAGACCGAGCAGCCCGGTCGCGCCGCCCGC TGA
Upstream 100 bases:
>100_bases CATCAGGCGGATCCCACGGGCCCTGGCGTACGTCGGGGTCTGGTTCGCCTGCTCGGCCGCGATCGCGCTGCTGCTCTTCC TCACCAGCAGCCGCTCCATC
Downstream 100 bases:
>100_bases GCCCGGCCCGGTCCGGACCGCCACGAGAACCTCGCGTGGCCTGCGTCACCTCCGGGGACCTGTGTCGTTGACGAACTGAT ACGTGTTCTAGAAATGGTGG
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MLASHDAVLRPTFSGHVVLRTGPVIPDVRVDAPGVLGVDIRLGKTDATSTDELLQRYAAIAGQPEGQVAKVTHAVRDMAL SAALRGAVLGLPPVLGWALVGAARRRELAARVHPPHLVLLSVGVVLVGLALWQPWLGDDDIEDVHRDWIPLGEFLGSGVP LPDEADGVEVSGDVTTKQTRRLIESAVDTYNTSKDFYAQAAEDAARLGLRHPVEGDTVVAFVSDRHDNIGMDKVARAIAD RAGATAVFDGGDDTSSGNSWEAFSLDSVSEAFDGLDRWGVAGNHDHGDFVHSYLADHGWTMLDGEVVEGPGGTTILGVDD PRSSGLGNWRDETGLTFDEVEQRLTDAACEAEERVDTILVHDANLGDEALARGCADLVIGGHLHVRQGPDRIIGSNGEVG YSYTTGTAGGAAYAFALGSKPRRAADISLITYHGGRPVGIQWVTLQTDGSYETGNYVPLHLPEDPPEVVEETEQPGRAAR
Sequences:
>Translated_480_residues MLASHDAVLRPTFSGHVVLRTGPVIPDVRVDAPGVLGVDIRLGKTDATSTDELLQRYAAIAGQPEGQVAKVTHAVRDMAL SAALRGAVLGLPPVLGWALVGAARRRELAARVHPPHLVLLSVGVVLVGLALWQPWLGDDDIEDVHRDWIPLGEFLGSGVP LPDEADGVEVSGDVTTKQTRRLIESAVDTYNTSKDFYAQAAEDAARLGLRHPVEGDTVVAFVSDRHDNIGMDKVARAIAD RAGATAVFDGGDDTSSGNSWEAFSLDSVSEAFDGLDRWGVAGNHDHGDFVHSYLADHGWTMLDGEVVEGPGGTTILGVDD PRSSGLGNWRDETGLTFDEVEQRLTDAACEAEERVDTILVHDANLGDEALARGCADLVIGGHLHVRQGPDRIIGSNGEVG YSYTTGTAGGAAYAFALGSKPRRAADISLITYHGGRPVGIQWVTLQTDGSYETGNYVPLHLPEDPPEVVEETEQPGRAAR >Mature_480_residues MLASHDAVLRPTFSGHVVLRTGPVIPDVRVDAPGVLGVDIRLGKTDATSTDELLQRYAAIAGQPEGQVAKVTHAVRDMAL SAALRGAVLGLPPVLGWALVGAARRRELAARVHPPHLVLLSVGVVLVGLALWQPWLGDDDIEDVHRDWIPLGEFLGSGVP LPDEADGVEVSGDVTTKQTRRLIESAVDTYNTSKDFYAQAAEDAARLGLRHPVEGDTVVAFVSDRHDNIGMDKVARAIAD RAGATAVFDGGDDTSSGNSWEAFSLDSVSEAFDGLDRWGVAGNHDHGDFVHSYLADHGWTMLDGEVVEGPGGTTILGVDD PRSSGLGNWRDETGLTFDEVEQRLTDAACEAEERVDTILVHDANLGDEALARGCADLVIGGHLHVRQGPDRIIGSNGEVG YSYTTGTAGGAAYAFALGSKPRRAADISLITYHGGRPVGIQWVTLQTDGSYETGNYVPLHLPEDPPEVVEETEQPGRAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50991; Mature: 50991
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASHDAVLRPTFSGHVVLRTGPVIPDVRVDAPGVLGVDIRLGKTDATSTDELLQRYAAI CCCCCCCEECCCCCCEEEEEECCCCCCCEECCCCEEEEEEEECCCCCCCHHHHHHHHHHH AGQPEGQVAKVTHAVRDMALSAALRGAVLGLPPVLGWALVGAARRRELAARVHPPHLVLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH SVGVVLVGLALWQPWLGDDDIEDVHRDWIPLGEFLGSGVPLPDEADGVEVSGDVTTKQTR HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEEECCCCCHHHHH RLIESAVDTYNTSKDFYAQAAEDAARLGLRHPVEGDTVVAFVSDRHDNIGMDKVARAIAD HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH RAGATAVFDGGDDTSSGNSWEAFSLDSVSEAFDGLDRWGVAGNHDHGDFVHSYLADHGWT HCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCE MLDGEVVEGPGGTTILGVDDPRSSGLGNWRDETGLTFDEVEQRLTDAACEAEERVDTILV EECCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE HDANLGDEALARGCADLVIGGHLHVRQGPDRIIGSNGEVGYSYTTGTAGGAAYAFALGSK ECCCCCHHHHHHHHHHHEECCEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEECCCC PRRAADISLITYHGGRPVGIQWVTLQTDGSYETGNYVPLHLPEDPPEVVEETEQPGRAAR CCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MLASHDAVLRPTFSGHVVLRTGPVIPDVRVDAPGVLGVDIRLGKTDATSTDELLQRYAAI CCCCCCCEECCCCCCEEEEEECCCCCCCEECCCCEEEEEEEECCCCCCCHHHHHHHHHHH AGQPEGQVAKVTHAVRDMALSAALRGAVLGLPPVLGWALVGAARRRELAARVHPPHLVLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH SVGVVLVGLALWQPWLGDDDIEDVHRDWIPLGEFLGSGVPLPDEADGVEVSGDVTTKQTR HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEEECCCCCHHHHH RLIESAVDTYNTSKDFYAQAAEDAARLGLRHPVEGDTVVAFVSDRHDNIGMDKVARAIAD HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH RAGATAVFDGGDDTSSGNSWEAFSLDSVSEAFDGLDRWGVAGNHDHGDFVHSYLADHGWT HCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCE MLDGEVVEGPGGTTILGVDDPRSSGLGNWRDETGLTFDEVEQRLTDAACEAEERVDTILV EECCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE HDANLGDEALARGCADLVIGGHLHVRQGPDRIIGSNGEVGYSYTTGTAGGAAYAFALGSK ECCCCCHHHHHHHHHHHEECCEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEECCCC PRRAADISLITYHGGRPVGIQWVTLQTDGSYETGNYVPLHLPEDPPEVVEETEQPGRAAR CCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA