| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is bglA [H]
Identifier: 119718137
GI number: 119718137
Start: 4123014
End: 4124381
Strand: Reverse
Name: bglA [H]
Synonym: Noca_3917
Alternate gene names: 119718137
Gene position: 4124381-4123014 (Counterclockwise)
Preceding gene: 119718139
Following gene: 119718132
Centisome position: 82.72
GC content: 74.49
Gene sequence:
>1368_bases ATGAGCCTGCACCTGCCGAGCCCCAGCACCCTCGCCTACGGCGCCGCGACCGCGTCGTACCAGATCGAGGGAGCGACCGC CGAGGACGGTCGCGGCGCCTCGATCTGGGACACCTTCACAACCCGTCCCGGCGCCATCCGGGACGGCTCGGACGGCTCGG TCGCCTGCGACTCCTACCACCGCTACGAGGAGGACGCCGACCTGGTCGCCGGCCTCGGCGTCGGGTGGTACCGCTTCTCG ATCGCCTGGCCGCGGGTGCTGCCCGAGGGCACCGGCCGGGTCGAGCCGCGCGGCCTCGACTACTACGACCGCCTGGTCGA CGCGCTGCTGGCGCGCGGCGTCTCCCCGACGGCGACCCTCTACCACTGGGACCTGCCGCAGGCCCTCGAGGACCGGGGCG GGTGGCTGGAGCGGTCGACCGCCGAGGCCTTCGCCGACTACGCGATGGTCGTCCACGAGCGGCTCGGCGACCGGGTGGGC GTCTGGGCGACCCACAACGAGCCGTGGTGTGCGGCCTACCTCGGCTACGCCGCCGGCATCCACGCCCCCGGCCGGCGCGA GGGCGGCGCCGCCCACCGGGCGGCCCACCACCTGCTGCTCGGCCACGGCCTCGCCGCCGCCCGCCTGCACGAGGCCGGGG TCGGCGACGTCGGCATCGCCCTCAACCTGGCGCCGTTCTGGCCCGAGTCGCCCGACGCGGTGGCCGCGGCGGACGGGGTC GACGCCATCCGCAACCGGCTCTGGCTCGGCCCGCTCGTCGACGGCGCGTACGACGACGGGCTGCTCGCCGTCGCGCCCGA GCTGGCCGACCCCGACGTGGTCCACGAGGGCGACCTCGAGCTGGTCCGCGGCTCGGCCGACTGGATCGGGATCAACTACT ACACGCCGTTCCGGCCGACCCTCGCCGACCCCGCGCTCGAGACCCACCCGGAGGTCGACGCCTATCCCGGCGCCACCCCG GTGTCCTTCGTGGTCCGCGAGCCGCGCACCGACATCGGCTGGGAGGTCGAGGCCCGTGGCCTGGAGGAGCTGCTCGTCGA GACGCACCGGCGCACCGGGCTGCCGCTGATCGTGACCGAGAACGGCGCGGCCTACGCCGACGACACCCTCCGGGAGGGTG CCGCCGGCGTCATCGACGACCAGGACCGGATCGCCTACCTGCGCGACCACATCGCCGCGACCGAGCGGGCCCGGTCGGCC GGTGCCGACGTGCGGGCCTACATCGTGTGGACCCTGCTGGACAACTTCGAGTGGGCCGAGGGCTACACCAAGACGTTCGG TGTCGTCCACGTGGACCCGAAGGACCAGACCCGGACCCCCAAGGCGTCCTACCACTGGCTGGCCGAGCACGTCGCCGAGG CCCATTGA
Upstream 100 bases:
>100_bases ACCGTCGCGGTCGACATCTCGACCTCGCGGGCGACGTCCTTGATGCCCGTCACAGCGGGAGCGCTCCCACTCCGGTGGCC CACGCACTACCGTGGAGCGC
Downstream 100 bases:
>100_bases CCTCCTCATGTCGTCCGTCCTGACCGTGGTTCCTGGACCTACCCCTTGACGCTGCCCGCCAGCAGGCCGCGGACAAAGTA CCGCTGCAGCGACAGGAACA
Product: beta-glucosidase
Products: NA
Alternate protein names: Amygdalase; Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSLHLPSPSTLAYGAATASYQIEGATAEDGRGASIWDTFTTRPGAIRDGSDGSVACDSYHRYEEDADLVAGLGVGWYRFS IAWPRVLPEGTGRVEPRGLDYYDRLVDALLARGVSPTATLYHWDLPQALEDRGGWLERSTAEAFADYAMVVHERLGDRVG VWATHNEPWCAAYLGYAAGIHAPGRREGGAAHRAAHHLLLGHGLAAARLHEAGVGDVGIALNLAPFWPESPDAVAAADGV DAIRNRLWLGPLVDGAYDDGLLAVAPELADPDVVHEGDLELVRGSADWIGINYYTPFRPTLADPALETHPEVDAYPGATP VSFVVREPRTDIGWEVEARGLEELLVETHRRTGLPLIVTENGAAYADDTLREGAAGVIDDQDRIAYLRDHIAATERARSA GADVRAYIVWTLLDNFEWAEGYTKTFGVVHVDPKDQTRTPKASYHWLAEHVAEAH
Sequences:
>Translated_455_residues MSLHLPSPSTLAYGAATASYQIEGATAEDGRGASIWDTFTTRPGAIRDGSDGSVACDSYHRYEEDADLVAGLGVGWYRFS IAWPRVLPEGTGRVEPRGLDYYDRLVDALLARGVSPTATLYHWDLPQALEDRGGWLERSTAEAFADYAMVVHERLGDRVG VWATHNEPWCAAYLGYAAGIHAPGRREGGAAHRAAHHLLLGHGLAAARLHEAGVGDVGIALNLAPFWPESPDAVAAADGV DAIRNRLWLGPLVDGAYDDGLLAVAPELADPDVVHEGDLELVRGSADWIGINYYTPFRPTLADPALETHPEVDAYPGATP VSFVVREPRTDIGWEVEARGLEELLVETHRRTGLPLIVTENGAAYADDTLREGAAGVIDDQDRIAYLRDHIAATERARSA GADVRAYIVWTLLDNFEWAEGYTKTFGVVHVDPKDQTRTPKASYHWLAEHVAEAH >Mature_454_residues SLHLPSPSTLAYGAATASYQIEGATAEDGRGASIWDTFTTRPGAIRDGSDGSVACDSYHRYEEDADLVAGLGVGWYRFSI AWPRVLPEGTGRVEPRGLDYYDRLVDALLARGVSPTATLYHWDLPQALEDRGGWLERSTAEAFADYAMVVHERLGDRVGV WATHNEPWCAAYLGYAAGIHAPGRREGGAAHRAAHHLLLGHGLAAARLHEAGVGDVGIALNLAPFWPESPDAVAAADGVD AIRNRLWLGPLVDGAYDDGLLAVAPELADPDVVHEGDLELVRGSADWIGINYYTPFRPTLADPALETHPEVDAYPGATPV SFVVREPRTDIGWEVEARGLEELLVETHRRTGLPLIVTENGAAYADDTLREGAAGVIDDQDRIAYLRDHIAATERARSAG ADVRAYIVWTLLDNFEWAEGYTKTFGVVHVDPKDQTRTPKASYHWLAEHVAEAH
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=470, Percent_Identity=35.531914893617, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI13273313, Length=474, Percent_Identity=32.4894514767932, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI110681710, Length=470, Percent_Identity=31.9148936170213, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI28376633, Length=468, Percent_Identity=29.4871794871795, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI24497614, Length=470, Percent_Identity=32.3404255319149, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI190360571, Length=88, Percent_Identity=44.3181818181818, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI2367174, Length=483, Percent_Identity=29.1925465838509, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI2367270, Length=474, Percent_Identity=30.5907172995781, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1789070, Length=476, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17552856, Length=480, Percent_Identity=33.125, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17539390, Length=491, Percent_Identity=29.5315682281059, Blast_Score=204, Evalue=6e-53, Organism=Drosophila melanogaster, GI21356577, Length=472, Percent_Identity=33.8983050847458, Blast_Score=236, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 49419; Mature: 49288
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHLPSPSTLAYGAATASYQIEGATAEDGRGASIWDTFTTRPGAIRDGSDGSVACDSYH CEECCCCCCCEEEECEEEEEEEECCCCCCCCCCEEEHHCCCCCCCCCCCCCCCEEECHHH RYEEDADLVAGLGVGWYRFSIAWPRVLPEGTGRVEPRGLDYYDRLVDALLARGVSPTATL HCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE YHWDLPQALEDRGGWLERSTAEAFADYAMVVHERLGDRVGVWATHNEPWCAAYLGYAAGI EECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCC HAPGRREGGAAHRAAHHLLLGHGLAAARLHEAGVGDVGIALNLAPFWPESPDAVAAADGV CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEHHCCH DAIRNRLWLGPLVDGAYDDGLLAVAPELADPDVVHEGDLELVRGSADWIGINYYTPFRPT HHHHHCEEECCCCCCCCCCCEEEECCCCCCCCCEECCCCEEEECCCCEEEEEEECCCCCC LADPALETHPEVDAYPGATPVSFVVREPRTDIGWEVEARGLEELLVETHRRTGLPLIVTE CCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEC NGAAYADDTLREGAAGVIDDQDRIAYLRDHIAATERARSAGADVRAYIVWTLLDNFEWAE CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC GYTKTFGVVHVDPKDQTRTPKASYHWLAEHVAEAH CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLHLPSPSTLAYGAATASYQIEGATAEDGRGASIWDTFTTRPGAIRDGSDGSVACDSYH EECCCCCCCEEEECEEEEEEEECCCCCCCCCCEEEHHCCCCCCCCCCCCCCCEEECHHH RYEEDADLVAGLGVGWYRFSIAWPRVLPEGTGRVEPRGLDYYDRLVDALLARGVSPTATL HCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE YHWDLPQALEDRGGWLERSTAEAFADYAMVVHERLGDRVGVWATHNEPWCAAYLGYAAGI EECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCC HAPGRREGGAAHRAAHHLLLGHGLAAARLHEAGVGDVGIALNLAPFWPESPDAVAAADGV CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEHHCCH DAIRNRLWLGPLVDGAYDDGLLAVAPELADPDVVHEGDLELVRGSADWIGINYYTPFRPT HHHHHCEEECCCCCCCCCCCEEEECCCCCCCCCEECCCCEEEECCCCEEEEEEECCCCCC LADPALETHPEVDAYPGATPVSFVVREPRTDIGWEVEARGLEELLVETHRRTGLPLIVTE CCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEC NGAAYADDTLREGAAGVIDDQDRIAYLRDHIAATERARSAGADVRAYIVWTLLDNFEWAE CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC GYTKTFGVVHVDPKDQTRTPKASYHWLAEHVAEAH CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8481013 [H]