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The map label for this gene is dinG [H]

Identifier: 119718046

GI number: 119718046

Start: 4045353

End: 4047383

Strand: Reverse

Name: dinG [H]

Synonym: Noca_3824

Alternate gene names: 119718046

Gene position: 4047383-4045353 (Counterclockwise)

Preceding gene: 119718047

Following gene: 119718038

Centisome position: 81.18

GC content: 74.99

Gene sequence:

>2031_bases
GTGCCCGAAGCCCCACCCGCCACGTCCCCCGCGACGGCCGTGACCCCAGTCGTCACGGAGCTGCTCGGCACCGCGGTGGC
GGCGCTGGGCGGCCAGGAGCGCGCCGGGCAGGTGCGGATGGCCGAGGCCGTCGCCGAGGCGATGGACAAGGGCCGGCACC
TGCTGGTCCAGGCCGGCACCGGCACCGGCAAGTCCCTGGCCTACCTGGTGCCGAGCCTGCTGCACGGTGACCGCGTGGTG
GTGGCGACCGCGACGCTCGCGCTGCAGCACCAGCTCGTCGAGCGCGACCTGCCGCGGCTGGTCGAGGCGGTCGAGGGCGC
TCCCGCGGCCGACGGTTCCGGCAGCCTCGACACCAGCTACGCCGTGCTCAAGGGCCGCTCCAACTACGCCTGCCTGCACC
GCATCCGCGAGGGCGTCCCCGACGACCAGGGTGCCCTGGTCGAGCTGCCCGAGGGTTCGCTGGGCAAGAAGGTGCTCGAG
CTGCGGGCCTGGGCCGAGGAGGAGGCCGAGCAGGGTGGCAGCGGCGAGCGCGACAACGCGCCCCGGCACACCGACCGGGA
GTGGCGCCAGGTCAGCGTCAACCACCGTGAGTGCCTGGGCGCGGCCAAGTGCCCGTTCGGCCAGGAGTGCTTCGCCGAGC
TGGCCAAGGAGAAGGCACACCGCTCCCACCTGGTGGTCACCAACCACTCGCTGCTCGCGATCGACGCGATCGAGGGCGTG
CCGATGATCCCCGAGTACGACGTCGTGGTGATCGACGAGGCGCACGAGCTCACCACCCGGGTGACCCAGGCGGCGACCGA
CGAGCTCTGGGCCGCCGAGGTCGAGCGCGCCGCGCGCCGCAGCCAGCGGCACGTGGACGGGAGCGCGGCCGACGACCTCG
CCGACGCGGCCGACGCGCTGCGCGACGCGATCGCCGAGGCCCGGCCGGGCCGCTTCGAGCGGGTCCCCGAGGAGCTCTCG
GACGCCCTGGTGCTGGTCCGCGACGCGGCGCGGGCCTGCCTCTCGGCGTACCCCAAGGCGGACTCCTCGGAGGAGCCCGA
CGCGGGCCGTCAGCAGGCCAAGGGCGCCGTGCAGGAGGTGTTCGCGACCGCCGAGCGGATGGCCGCGGCCTCCGAGAGCG
ACGTGCTGTGGCTCAGCGAGGGCACCGAGCGGATGCCGCCGCGGCTGTGTGTGGCGCCGCTGCAGGTGTGGGGCCCGATG
CGCGACAAGCTGCTGGCCGACAAGACGGTGGTGTTCACCTCGGCCACCCTGATGCTCGGCGGCGACTTCTCCTCGGTCGC
CACCAGCGTCGGGCTGAAGCCCGCCGAGCGGATCGTCGACGGCTCCCCGGTCGCCGAGACGCCGGTGTCCGAGCAGGCCC
AGCCGTGGCGCGGCCTCGACGTCGGCAGCCCGTTCGACTACGGCCGGCAGGCGATCCTGTACGTCGCCCGGCACCTGCCG
CCCCCGGGCCGCGACGGGCTCGGGAAGGCCCAGCTCGACGAGATCGTCGAGCTGGTCGACGCGGCGCACGGCCGCACGCT
CGGGCTGTTCTCGAGCCGCCGCGCGGCCGAGGCAGCGGCGGAGACCGTCCGCGGGCGGCTGCCGCACCTCACCACCCTGG
CCCAGGGCGACGCGCAGCTGCCCGAGCTCGCCGCGCAGTTCGTCGGCGACCCGCACACCTGCCTGTTCGGCACGCTCAGC
CTGTGGCAGGGCCTCGACGTCCCCGGCGACACCTGCCAGCTGGTGCTCATCGACCGGATCCCGTTCCCGCGACCGGACGA
CCCGCTGCTCAGTGCCCGCCAGAAGGCCGCCGACCAGGCCGGCGGCAACGGCTTCATGCAGGTGGCGGCCACCCATGCCG
CACTGCTGCTCGCCCAGGGCGCGGGCCGGCTGATCCGCACCCACACCGACCGCGGCGTCGTCGCCGTCCTCGACCCACGG
CTCGCGACCGCCCGGTACGGCGGGTTCCTCAAGGCGAGCCTGCCGCCGATGTGGACGACCACCGATCCGGCGGTCGCCCG
CCAGGCGCTGACCCGGCTCGCGGCTACCTGA

Upstream 100 bases:

>100_bases
ACCATGTTGCAGCACCGTGGGAACAAGGGGTAACCCGGCGTTACAGCTGGGCGGGGACGGTGCGGCGCGGGGTGTCTGGG
GGCGCGGCTAGGGTGCTCGG

Downstream 100 bases:

>100_bases
CCGCCTGCGCCCGCATCAGCACCTTGCGGCCGTCGTCGAGCGAGCTGCCCTGGCACGAGTAGGCGCCGCCCGTCCAGCAG
TCGTAGCGGCTGCCGGCGTT

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 676; Mature: 675

Protein sequence:

>676_residues
MPEAPPATSPATAVTPVVTELLGTAVAALGGQERAGQVRMAEAVAEAMDKGRHLLVQAGTGTGKSLAYLVPSLLHGDRVV
VATATLALQHQLVERDLPRLVEAVEGAPAADGSGSLDTSYAVLKGRSNYACLHRIREGVPDDQGALVELPEGSLGKKVLE
LRAWAEEEAEQGGSGERDNAPRHTDREWRQVSVNHRECLGAAKCPFGQECFAELAKEKAHRSHLVVTNHSLLAIDAIEGV
PMIPEYDVVVIDEAHELTTRVTQAATDELWAAEVERAARRSQRHVDGSAADDLADAADALRDAIAEARPGRFERVPEELS
DALVLVRDAARACLSAYPKADSSEEPDAGRQQAKGAVQEVFATAERMAAASESDVLWLSEGTERMPPRLCVAPLQVWGPM
RDKLLADKTVVFTSATLMLGGDFSSVATSVGLKPAERIVDGSPVAETPVSEQAQPWRGLDVGSPFDYGRQAILYVARHLP
PPGRDGLGKAQLDEIVELVDAAHGRTLGLFSSRRAAEAAAETVRGRLPHLTTLAQGDAQLPELAAQFVGDPHTCLFGTLS
LWQGLDVPGDTCQLVLIDRIPFPRPDDPLLSARQKAADQAGGNGFMQVAATHAALLLAQGAGRLIRTHTDRGVVAVLDPR
LATARYGGFLKASLPPMWTTTDPAVARQALTRLAAT

Sequences:

>Translated_676_residues
MPEAPPATSPATAVTPVVTELLGTAVAALGGQERAGQVRMAEAVAEAMDKGRHLLVQAGTGTGKSLAYLVPSLLHGDRVV
VATATLALQHQLVERDLPRLVEAVEGAPAADGSGSLDTSYAVLKGRSNYACLHRIREGVPDDQGALVELPEGSLGKKVLE
LRAWAEEEAEQGGSGERDNAPRHTDREWRQVSVNHRECLGAAKCPFGQECFAELAKEKAHRSHLVVTNHSLLAIDAIEGV
PMIPEYDVVVIDEAHELTTRVTQAATDELWAAEVERAARRSQRHVDGSAADDLADAADALRDAIAEARPGRFERVPEELS
DALVLVRDAARACLSAYPKADSSEEPDAGRQQAKGAVQEVFATAERMAAASESDVLWLSEGTERMPPRLCVAPLQVWGPM
RDKLLADKTVVFTSATLMLGGDFSSVATSVGLKPAERIVDGSPVAETPVSEQAQPWRGLDVGSPFDYGRQAILYVARHLP
PPGRDGLGKAQLDEIVELVDAAHGRTLGLFSSRRAAEAAAETVRGRLPHLTTLAQGDAQLPELAAQFVGDPHTCLFGTLS
LWQGLDVPGDTCQLVLIDRIPFPRPDDPLLSARQKAADQAGGNGFMQVAATHAALLLAQGAGRLIRTHTDRGVVAVLDPR
LATARYGGFLKASLPPMWTTTDPAVARQALTRLAAT
>Mature_675_residues
PEAPPATSPATAVTPVVTELLGTAVAALGGQERAGQVRMAEAVAEAMDKGRHLLVQAGTGTGKSLAYLVPSLLHGDRVVV
ATATLALQHQLVERDLPRLVEAVEGAPAADGSGSLDTSYAVLKGRSNYACLHRIREGVPDDQGALVELPEGSLGKKVLEL
RAWAEEEAEQGGSGERDNAPRHTDREWRQVSVNHRECLGAAKCPFGQECFAELAKEKAHRSHLVVTNHSLLAIDAIEGVP
MIPEYDVVVIDEAHELTTRVTQAATDELWAAEVERAARRSQRHVDGSAADDLADAADALRDAIAEARPGRFERVPEELSD
ALVLVRDAARACLSAYPKADSSEEPDAGRQQAKGAVQEVFATAERMAAASESDVLWLSEGTERMPPRLCVAPLQVWGPMR
DKLLADKTVVFTSATLMLGGDFSSVATSVGLKPAERIVDGSPVAETPVSEQAQPWRGLDVGSPFDYGRQAILYVARHLPP
PGRDGLGKAQLDEIVELVDAAHGRTLGLFSSRRAAEAAAETVRGRLPHLTTLAQGDAQLPELAAQFVGDPHTCLFGTLSL
WQGLDVPGDTCQLVLIDRIPFPRPDDPLLSARQKAADQAGGNGFMQVAATHAALLLAQGAGRLIRTHTDRGVVAVLDPRL
ATARYGGFLKASLPPMWTTTDPAVARQALTRLAAT

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=665, Percent_Identity=33.2330827067669, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1787018, Length=238, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: PF00270 DEAD [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 71908; Mature: 71777

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEAPPATSPATAVTPVVTELLGTAVAALGGQERAGQVRMAEAVAEAMDKGRHLLVQAGT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCEEEEEECC
GTGKSLAYLVPSLLHGDRVVVATATLALQHQLVERDLPRLVEAVEGAPAADGSGSLDTSY
CCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AVLKGRSNYACLHRIREGVPDDQGALVELPEGSLGKKVLELRAWAEEEAEQGGSGERDNA
CEEECCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PRHTDREWRQVSVNHRECLGAAKCPFGQECFAELAKEKAHRSHLVVTNHSLLAIDAIEGV
CCCCCHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCC
PMIPEYDVVVIDEAHELTTRVTQAATDELWAAEVERAARRSQRHVDGSAADDLADAADAL
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RDAIAEARPGRFERVPEELSDALVLVRDAARACLSAYPKADSSEEPDAGRQQAKGAVQEV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
FATAERMAAASESDVLWLSEGTERMPPRLCVAPLQVWGPMRDKLLADKTVVFTSATLMLG
HHHHHHHHHCCCCCEEEECCCCCCCCCHHEECHHHHHCCHHHHHHHCCEEEEEEEEEEEC
GDFSSVATSVGLKPAERIVDGSPVAETPVSEQAQPWRGLDVGSPFDYGRQAILYVARHLP
CCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PPGRDGLGKAQLDEIVELVDAAHGRTLGLFSSRRAAEAAAETVRGRLPHLTTLAQGDAQL
CCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH
PELAAQFVGDPHTCLFGTLSLWQGLDVPGDTCQLVLIDRIPFPRPDDPLLSARQKAADQA
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC
GGNGFMQVAATHAALLLAQGAGRLIRTHTDRGVVAVLDPRLATARYGGFLKASLPPMWTT
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHCCEEECCCCCCCCC
TDPAVARQALTRLAAT
CCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEAPPATSPATAVTPVVTELLGTAVAALGGQERAGQVRMAEAVAEAMDKGRHLLVQAGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCEEEEEECC
GTGKSLAYLVPSLLHGDRVVVATATLALQHQLVERDLPRLVEAVEGAPAADGSGSLDTSY
CCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AVLKGRSNYACLHRIREGVPDDQGALVELPEGSLGKKVLELRAWAEEEAEQGGSGERDNA
CEEECCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PRHTDREWRQVSVNHRECLGAAKCPFGQECFAELAKEKAHRSHLVVTNHSLLAIDAIEGV
CCCCCHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCC
PMIPEYDVVVIDEAHELTTRVTQAATDELWAAEVERAARRSQRHVDGSAADDLADAADAL
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RDAIAEARPGRFERVPEELSDALVLVRDAARACLSAYPKADSSEEPDAGRQQAKGAVQEV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
FATAERMAAASESDVLWLSEGTERMPPRLCVAPLQVWGPMRDKLLADKTVVFTSATLMLG
HHHHHHHHHCCCCCEEEECCCCCCCCCHHEECHHHHHCCHHHHHHHCCEEEEEEEEEEEC
GDFSSVATSVGLKPAERIVDGSPVAETPVSEQAQPWRGLDVGSPFDYGRQAILYVARHLP
CCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PPGRDGLGKAQLDEIVELVDAAHGRTLGLFSSRRAAEAAAETVRGRLPHLTTLAQGDAQL
CCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH
PELAAQFVGDPHTCLFGTLSLWQGLDVPGDTCQLVLIDRIPFPRPDDPLLSARQKAADQA
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC
GGNGFMQVAATHAALLLAQGAGRLIRTHTDRGVVAVLDPRLATARYGGFLKASLPPMWTT
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHCCEEECCCCCCCCC
TDPAVARQALTRLAAT
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]