| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718023
Identifier: 119718023
GI number: 119718023
Start: 4016660
End: 4017124
Strand: Reverse
Name: 119718023
Synonym: Noca_3801
Alternate gene names: NA
Gene position: 4017124-4016660 (Counterclockwise)
Preceding gene: 119718024
Following gene: 119718021
Centisome position: 80.57
GC content: 76.34
Gene sequence:
>465_bases GTGGGCCTGGTCGTCGACGTACGACGCTTCCCCGGCAGCCGTCGCCACCCGCACGTGGCGACCGACCGGCTCGAGCGGTG GCTCCCGGCAGCCGCCGTCGCCTACCGCTGGGAGCCGCGGCTGGGCGGACGCCGCCGGGTCCCGCCGGACGAGCGCGACG CCGACCCGTGGTGGCGGGTCGAGGCGTTCCGGGCGTACGCCGCGTACACCCGCACCGAGGAGTTCCGTGAGGCGATGGAC GGCCTCCTCACGGAGGTCTCCGCGCGCGCCGACGCGAGCACCGCGGTGATGTGCAGCGAGAGCCTGTGGTGGCGCTGCCA CCGCCGGCTGATCGCCGACGTCGCGGTGCTCCTGCACGGTGTTCCGGTGCTGCACCTCTGGCACGACGGCAGGCGCACCG AGCACGTGCCGGCCGCGGGCGCGCGGGTCACCCCCGACGGGCTGCGCTACGACGGGGACCGCTGA
Upstream 100 bases:
>100_bases GGGGCAGGAACCCGAGGAGGCCCCCATCGTCACGCTGCTCACCGTCGGCCACGGCACCGCGAGCCAGGATGAGCTCACCG AGCTCCTCACGGGTGGCGGG
Downstream 100 bases:
>100_bases CCCGCGCCGTCGGGCGCGGGCGGCGTCCGGCGCTCAGCCCGCGAGCCGCTCCAGCCCGTAGTAGACGAGGAACGCCGGCC AGACGATCCCCTCGAGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MGLVVDVRRFPGSRRHPHVATDRLERWLPAAAVAYRWEPRLGGRRRVPPDERDADPWWRVEAFRAYAAYTRTEEFREAMD GLLTEVSARADASTAVMCSESLWWRCHRRLIADVAVLLHGVPVLHLWHDGRRTEHVPAAGARVTPDGLRYDGDR
Sequences:
>Translated_154_residues MGLVVDVRRFPGSRRHPHVATDRLERWLPAAAVAYRWEPRLGGRRRVPPDERDADPWWRVEAFRAYAAYTRTEEFREAMD GLLTEVSARADASTAVMCSESLWWRCHRRLIADVAVLLHGVPVLHLWHDGRRTEHVPAAGARVTPDGLRYDGDR >Mature_153_residues GLVVDVRRFPGSRRHPHVATDRLERWLPAAAVAYRWEPRLGGRRRVPPDERDADPWWRVEAFRAYAAYTRTEEFREAMDG LLTEVSARADASTAVMCSESLWWRCHRRLIADVAVLLHGVPVLHLWHDGRRTEHVPAAGARVTPDGLRYDGDR
Specific function: Unknown
COG id: COG5483
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17730; Mature: 17599
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLVVDVRRFPGSRRHPHVATDRLERWLPAAAVAYRWEPRLGGRRRVPPDERDADPWWRV CCEEEEHHHCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHH EAFRAYAAYTRTEEFREAMDGLLTEVSARADASTAVMCSESLWWRCHRRLIADVAVLLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VPVLHLWHDGRRTEHVPAAGARVTPDGLRYDGDR CCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure GLVVDVRRFPGSRRHPHVATDRLERWLPAAAVAYRWEPRLGGRRRVPPDERDADPWWRV CEEEEHHHCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHH EAFRAYAAYTRTEEFREAMDGLLTEVSARADASTAVMCSESLWWRCHRRLIADVAVLLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC VPVLHLWHDGRRTEHVPAAGARVTPDGLRYDGDR CCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA