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The map label for this gene is desA3 [H]

Identifier: 119717989

GI number: 119717989

Start: 3988361

End: 3989515

Strand: Reverse

Name: desA3 [H]

Synonym: Noca_3767

Alternate gene names: 119717989

Gene position: 3989515-3988361 (Counterclockwise)

Preceding gene: 119717997

Following gene: 119717985

Centisome position: 80.02

GC content: 69.09

Gene sequence:

>1155_bases
ATGACCACGATGCAGGTGCGCCCGCGGACGGCGCCGGGCGGGCTCACGACCGACGAGGTCGAGCTGCTCGGCAAGGAGCT
CGACGCGATCCGGCAGGGCGTGCTCGACAGCCGTGGCGCACGGGACGCGGCGTACATCCGCCGGGTCGTCCAGGTGCAGC
GGATGCTCGAACTCGGCAGCCGGGCGGTGCTGCTGCGCAGCCGGCGCCCCGCCGCGTGGGTGGTCGGCACCGCCGGGCTC
GCGATCGCCAAGATCCTCGACAACATGGAGATCGGGCACAACGTCCTGCACGGTCAGTGGGACTGGATGCGCGACCCCAA
GATCCACTCCAGCACCTGGGAGTGGGACCACGTCACCCCCGCGGCTCAGTGGAAGCGCGCCCACAACGAGACCCACCACA
CCTACACGAACATTCGCGGCTTGGACAACGACCTCGGGTACGGCATCATGCGCGTCGACGAGGCGCAGGAGTGGCAGCCG
CGCTACCTCGTGCAGCCCGCGTGGAACTTCGTGACCGCCTGCATCTTCGAGTACGGCATCGCGATGTTCGACCTCGACCT
CGGCGACCACCTCCGCGACAAGCGCCAGATGACGCCGGAGAAGAAGGCGGAGGTCAAGGTGGCGCTCGCCAAGGCCGGCC
GCCAGCTGACCAAGGACTTCGTGCTGTACCCGGCGCTGTCGGGTCGCGGCTGGCGCTCGACGCTCGCGGCGGATGCGACC
GCGAACCTGGTGCGCAACCTGTGGAGCCACTCGGTGATCATGTGCGGGCACTTCCCCGAGGGCGTGCAGACCTTCGAGCA
GGCCGAGCTCGACGAGAACGAGACCCGCGGGAGCTGGTACCTGCGCCAGATGCTCGGCTCGGCGAACATCTCCGGCTCGC
GGCTGCTGCACCTGATGACCGGCAACCTGTCCCACCAGATCGAGCACCACATCTTCCCCGACCTGCCGAGCAACCGGTAC
GCCGAGATCGCGCCCCGGGTGCGGGAGGTGTTCGCGAGGTTCGACCTGGCCTACAACGCCCGGCCGATGGTCAAGCAGGT
CGCCAGCGCCTGGCACAAGGTGATCCGGCTCTCGCTGCCCAACGGCTGGCTGGCCGAGACCAACCGGCGCAACCTGGTCC
CTCAGCTCAGGAGGTTGGCGGTCCGTCCCGCCTGA

Upstream 100 bases:

>100_bases
GTTCCCGGGAGGGGCCCCCACCTGCCGGCCGTACGTCGTCACGCACGGCGGCCGAACCCCGTACGGCGTGTCGTGCCCGC
CGGTGGGGCACAGTGTGAGC

Downstream 100 bases:

>100_bases
TCGGGGCTCGCGTCCGGCTGGTCCGGCTCGTCGGACTCCGAGGGCCCGTCGGGTGCGTCCTGTGCCGGTTCGCTCGGGTC
GGTGGACTCGCTGGGCTCGG

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTTMQVRPRTAPGGLTTDEVELLGKELDAIRQGVLDSRGARDAAYIRRVVQVQRMLELGSRAVLLRSRRPAAWVVGTAGL
AIAKILDNMEIGHNVLHGQWDWMRDPKIHSSTWEWDHVTPAAQWKRAHNETHHTYTNIRGLDNDLGYGIMRVDEAQEWQP
RYLVQPAWNFVTACIFEYGIAMFDLDLGDHLRDKRQMTPEKKAEVKVALAKAGRQLTKDFVLYPALSGRGWRSTLAADAT
ANLVRNLWSHSVIMCGHFPEGVQTFEQAELDENETRGSWYLRQMLGSANISGSRLLHLMTGNLSHQIEHHIFPDLPSNRY
AEIAPRVREVFARFDLAYNARPMVKQVASAWHKVIRLSLPNGWLAETNRRNLVPQLRRLAVRPA

Sequences:

>Translated_384_residues
MTTMQVRPRTAPGGLTTDEVELLGKELDAIRQGVLDSRGARDAAYIRRVVQVQRMLELGSRAVLLRSRRPAAWVVGTAGL
AIAKILDNMEIGHNVLHGQWDWMRDPKIHSSTWEWDHVTPAAQWKRAHNETHHTYTNIRGLDNDLGYGIMRVDEAQEWQP
RYLVQPAWNFVTACIFEYGIAMFDLDLGDHLRDKRQMTPEKKAEVKVALAKAGRQLTKDFVLYPALSGRGWRSTLAADAT
ANLVRNLWSHSVIMCGHFPEGVQTFEQAELDENETRGSWYLRQMLGSANISGSRLLHLMTGNLSHQIEHHIFPDLPSNRY
AEIAPRVREVFARFDLAYNARPMVKQVASAWHKVIRLSLPNGWLAETNRRNLVPQLRRLAVRPA
>Mature_383_residues
TTMQVRPRTAPGGLTTDEVELLGKELDAIRQGVLDSRGARDAAYIRRVVQVQRMLELGSRAVLLRSRRPAAWVVGTAGLA
IAKILDNMEIGHNVLHGQWDWMRDPKIHSSTWEWDHVTPAAQWKRAHNETHHTYTNIRGLDNDLGYGIMRVDEAQEWQPR
YLVQPAWNFVTACIFEYGIAMFDLDLGDHLRDKRQMTPEKKAEVKVALAKAGRQLTKDFVLYPALSGRGWRSTLAADATA
NLVRNLWSHSVIMCGHFPEGVQTFEQAELDENETRGSWYLRQMLGSANISGSRLLHLMTGNLSHQIEHHIFPDLPSNRYA
EIAPRVREVFARFDLAYNARPMVKQVASAWHKVIRLSLPNGWLAETNRRNLVPQLRRLAVRPA

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 43770; Mature: 43638

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMQVRPRTAPGGLTTDEVELLGKELDAIRQGVLDSRGARDAAYIRRVVQVQRMLELGS
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
RAVLLRSRRPAAWVVGTAGLAIAKILDNMEIGHNVLHGQWDWMRDPKIHSSTWEWDHVTP
CEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCH
AAQWKRAHNETHHTYTNIRGLDNDLGYGIMRVDEAQEWQPRYLVQPAWNFVTACIFEYGI
HHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCH
AMFDLDLGDHLRDKRQMTPEKKAEVKVALAKAGRQLTKDFVLYPALSGRGWRSTLAADAT
HEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH
ANLVRNLWSHSVIMCGHFPEGVQTFEQAELDENETRGSWYLRQMLGSANISGSRLLHLMT
HHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHEEEEHH
GNLSHQIEHHIFPDLPSNRYAEIAPRVREVFARFDLAYNARPMVKQVASAWHKVIRLSLP
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECC
NGWLAETNRRNLVPQLRRLAVRPA
CCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTMQVRPRTAPGGLTTDEVELLGKELDAIRQGVLDSRGARDAAYIRRVVQVQRMLELGS
CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
RAVLLRSRRPAAWVVGTAGLAIAKILDNMEIGHNVLHGQWDWMRDPKIHSSTWEWDHVTP
CEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCH
AAQWKRAHNETHHTYTNIRGLDNDLGYGIMRVDEAQEWQPRYLVQPAWNFVTACIFEYGI
HHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCH
AMFDLDLGDHLRDKRQMTPEKKAEVKVALAKAGRQLTKDFVLYPALSGRGWRSTLAADAT
HEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH
ANLVRNLWSHSVIMCGHFPEGVQTFEQAELDENETRGSWYLRQMLGSANISGSRLLHLMT
HHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHEEEEHH
GNLSHQIEHHIFPDLPSNRYAEIAPRVREVFARFDLAYNARPMVKQVASAWHKVIRLSLP
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECC
NGWLAETNRRNLVPQLRRLAVRPA
CCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]