| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717955
Identifier: 119717955
GI number: 119717955
Start: 3957163
End: 3957483
Strand: Reverse
Name: 119717955
Synonym: Noca_3733
Alternate gene names: NA
Gene position: 3957483-3957163 (Counterclockwise)
Preceding gene: 119717960
Following gene: 119717947
Centisome position: 79.37
GC content: 70.4
Gene sequence:
>321_bases GTGCCCGCGTCCCAGGGTCGTGGGTCCGTGGGCGGCACGGACCTTGTTCCTCGCCGGTTCCTCGCCGGTTCCTCGCCGGT TCCCTCAAGTCGGCTCCCAGCCGTCTCCAAGCGCCGCCGCCGACGATGGGCGTGCCCACCACGGAGGTGGATCCCGAGAC CGGAGAAGGAACCCGTCATGAAGTCGATGCTGGCCGAGCGCCGCGAGGTGTGGCGCTCGCTGACCCACCAGGACAAGCAG CAGCGCCTGGAGGACCTGCGCCGACGCCATCAGAGCCAGGTCGAGCTGGAGATGCTGCGCCTGCGGCACCAGACCCGCTG A
Upstream 100 bases:
>100_bases CGGTGCCGACGTACCCCGAGCGGCGGGCGGCCGCCGTGGGCGACCGCTTGTGGCTGGCGACCCGGGTGGGCGTGCTCATG GCACCAGGCTGGGGCGCCGG
Downstream 100 bases:
>100_bases CCTTCGCGGCGGGTCGACCGGTGGCGTGCACGGGCCCCCGGGGTTGGTGGGCGCCGGACGGTCGTTGTGACCGCCACACC CCGACCCCGGGCGCTCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MPASQGRGSVGGTDLVPRRFLAGSSPVPSSRLPAVSKRRRRRWACPPRRWIPRPEKEPVMKSMLAERREVWRSLTHQDKQ QRLEDLRRRHQSQVELEMLRLRHQTR
Sequences:
>Translated_106_residues MPASQGRGSVGGTDLVPRRFLAGSSPVPSSRLPAVSKRRRRRWACPPRRWIPRPEKEPVMKSMLAERREVWRSLTHQDKQ QRLEDLRRRHQSQVELEMLRLRHQTR >Mature_105_residues PASQGRGSVGGTDLVPRRFLAGSSPVPSSRLPAVSKRRRRRWACPPRRWIPRPEKEPVMKSMLAERREVWRSLTHQDKQQ RLEDLRRRHQSQVELEMLRLRHQTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12583; Mature: 12452
Theoretical pI: Translated: 12.43; Mature: 12.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASQGRGSVGGTDLVPRRFLAGSSPVPSSRLPAVSKRRRRRWACPPRRWIPRPEKEPVM CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHH KSMLAERREVWRSLTHQDKQQRLEDLRRRHQSQVELEMLRLRHQTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PASQGRGSVGGTDLVPRRFLAGSSPVPSSRLPAVSKRRRRRWACPPRRWIPRPEKEPVM CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHH KSMLAERREVWRSLTHQDKQQRLEDLRRRHQSQVELEMLRLRHQTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA