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The map label for this gene is ycjP [C]

Identifier: 119717903

GI number: 119717903

Start: 3903878

End: 3904795

Strand: Reverse

Name: ycjP [C]

Synonym: Noca_3681

Alternate gene names: 119717903

Gene position: 3904795-3903878 (Counterclockwise)

Preceding gene: 119717904

Following gene: 119717902

Centisome position: 78.32

GC content: 66.67

Gene sequence:

>918_bases
ATGAGCGACTCGACGTCGTCCCGCCGCTTCGCGACCCGGTTCGCGCCCAGTGCCGATCGCAACGCCTCGCGCGGCCCACG
GCGGTCGCAGGACGGCTCCCTCCGCCCCGTCAGCGGGGCGTGGGCCACGGGCGGACGGCTTCTCCTCGGAGGTGCCTTCC
TCCTGGTCGCGTTGCCGTTGTTCTGGGTGGTGCTCGGCAGCTTCAAGAGCCCCACAGCGCTCAACGATCCGACCGCCGTG
GTGTTCAGCCCGACGACATCGAACTGGTCAGCGATCGCCTCATCTGGGGTTCTCGGCTCCGCTGGTCGCAGCGCACTTGT
CGGCCTCGCGACGGTGATCATCTCGCTCGTGCTCGGCTCGATGGCCGCGTACTCGATCTCGCGCTTCAAGACGGGCGGCG
ACGTGACGCGATTCGGGATCCTTGCCGCGCAAGTCCTCCCGCCCGCGGTGCTCGTCTTCCCGTTCCTGGTCGTCTCCTAC
AACTTGCGCCTCAACGACACGCTCGTGGCTGTGACGTCGGCCCATCTCAGCTTCGTCCTGCCGGTCGTGTGCTGGTTCCT
GATCGGGTTCTTCGACGCGGTTCCCATCTCGATCGAGGAGCAGGCCATGGTGGACGGGCTGACTCGCTTCGCCGCCTTCC
GGAAGGTGGTACTCCCTCAGGTCGCTCCCGGCATGGGTGCGGCTGCCATCTTCGGATTCGTCCTGTCGTGGAACGACCTC
TTCTACGCTTTGATCCTCGCGCCCGGCAACTCGGCGACTCTGCCCGTCACGATTGCCAGCTTCAACACCTTCCGTGGTGT
CGAGTTGGGCGCTATGTGCGCCGCCATCGTCGTCTCGATCGTGCCGGTCCTCATCGTCAGCTACGTCGTCCAGCGCCGCC
TCGTCCAGGGCCTCGCTGGCGGCGCGGTCAAGTTCTAG

Upstream 100 bases:

>100_bases
TCCGTCTCGCCTCAGCCTCTGCGATGGCCTACCTGTTGCTGGCCGCCGTGGTGGTGCTCGCGGTTCTCCTGTTCGCCCGG
ATTCGACGAGGAGGAGTCCT

Downstream 100 bases:

>100_bases
GAAGGAAAGCAGGATGGCAGCTGTCGAGTTGCGTCACGTCTCCAAGATCTTCGGTTCCAAGACGACTGTCGATGACATCA
GTCTCACCCTGCCCGACGGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSDSTSSRRFATRFAPSADRNASRGPRRSQDGSLRPVSGAWATGGRLLLGGAFLLVALPLFWVVLGSFKSPTALNDPTAV
VFSPTTSNWSAIASSGVLGSAGRSALVGLATVIISLVLGSMAAYSISRFKTGGDVTRFGILAAQVLPPAVLVFPFLVVSY
NLRLNDTLVAVTSAHLSFVLPVVCWFLIGFFDAVPISIEEQAMVDGLTRFAAFRKVVLPQVAPGMGAAAIFGFVLSWNDL
FYALILAPGNSATLPVTIASFNTFRGVELGAMCAAIVVSIVPVLIVSYVVQRRLVQGLAGGAVKF

Sequences:

>Translated_305_residues
MSDSTSSRRFATRFAPSADRNASRGPRRSQDGSLRPVSGAWATGGRLLLGGAFLLVALPLFWVVLGSFKSPTALNDPTAV
VFSPTTSNWSAIASSGVLGSAGRSALVGLATVIISLVLGSMAAYSISRFKTGGDVTRFGILAAQVLPPAVLVFPFLVVSY
NLRLNDTLVAVTSAHLSFVLPVVCWFLIGFFDAVPISIEEQAMVDGLTRFAAFRKVVLPQVAPGMGAAAIFGFVLSWNDL
FYALILAPGNSATLPVTIASFNTFRGVELGAMCAAIVVSIVPVLIVSYVVQRRLVQGLAGGAVKF
>Mature_304_residues
SDSTSSRRFATRFAPSADRNASRGPRRSQDGSLRPVSGAWATGGRLLLGGAFLLVALPLFWVVLGSFKSPTALNDPTAVV
FSPTTSNWSAIASSGVLGSAGRSALVGLATVIISLVLGSMAAYSISRFKTGGDVTRFGILAAQVLPPAVLVFPFLVVSYN
LRLNDTLVAVTSAHLSFVLPVVCWFLIGFFDAVPISIEEQAMVDGLTRFAAFRKVVLPQVAPGMGAAAIFGFVLSWNDLF
YALILAPGNSATLPVTIASFNTFRGVELGAMCAAIVVSIVPVLIVSYVVQRRLVQGLAGGAVKF

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=189, Percent_Identity=30.1587301587302, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790464, Length=199, Percent_Identity=33.6683417085427, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31974; Mature: 31843

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSTSSRRFATRFAPSADRNASRGPRRSQDGSLRPVSGAWATGGRLLLGGAFLLVALPL
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FWVVLGSFKSPTALNDPTAVVFSPTTSNWSAIASSGVLGSAGRSALVGLATVIISLVLGS
HHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MAAYSISRFKTGGDVTRFGILAAQVLPPAVLVFPFLVVSYNLRLNDTLVAVTSAHLSFVL
HHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEECCCEEEHHHHHHHHHH
PVVCWFLIGFFDAVPISIEEQAMVDGLTRFAAFRKVVLPQVAPGMGAAAIFGFVLSWNDL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FYALILAPGNSATLPVTIASFNTFRGVELGAMCAAIVVSIVPVLIVSYVVQRRLVQGLAG
EEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAVKF
CCCCC
>Mature Secondary Structure 
SDSTSSRRFATRFAPSADRNASRGPRRSQDGSLRPVSGAWATGGRLLLGGAFLLVALPL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FWVVLGSFKSPTALNDPTAVVFSPTTSNWSAIASSGVLGSAGRSALVGLATVIISLVLGS
HHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MAAYSISRFKTGGDVTRFGILAAQVLPPAVLVFPFLVVSYNLRLNDTLVAVTSAHLSFVL
HHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEECCCEEEHHHHHHHHHH
PVVCWFLIGFFDAVPISIEEQAMVDGLTRFAAFRKVVLPQVAPGMGAAAIFGFVLSWNDL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FYALILAPGNSATLPVTIASFNTFRGVELGAMCAAIVVSIVPVLIVSYVVQRRLVQGLAG
EEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAVKF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]