| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717893
Identifier: 119717893
GI number: 119717893
Start: 3893483
End: 3894205
Strand: Reverse
Name: 119717893
Synonym: Noca_3671
Alternate gene names: NA
Gene position: 3894205-3893483 (Counterclockwise)
Preceding gene: 119717894
Following gene: 119717892
Centisome position: 78.1
GC content: 71.65
Gene sequence:
>723_bases ATGGGCCCCATGAGCGCCAAGGCGAAGAGGGCACGCGAGATCAACGACTCCATCCGCTACACGATGTGGTCGGTGTTCCG GGTCGCCGACCCGCTCGGCCCGCCGGACTCCGGTGCGGACCGGGCCGCGGAGGGCGCCGAGGTCGAGCAGCTCTTCGCCG AGCTCGAGGCGGCGGACGTGGTGGTGCGCGGCGTGTACGACGTCGCCGGCCTGCGCGCCGACGCCGAGCTGATGATCTGG TGGCACGCCGAGACCTCCGAGGCGCTGCAGGACGCCTACCAACGGCTCCGCCACACCGCGCTCGGGCGTCGGCTGGAGCC GGTGTGGTCGCAGCTGGCGCTGCACCGTCCGGCGGAGTTCAACAAGAGCCACGTGCCGGCCTTCCTCGACGACGAGGAGC CGCCCCGGAAGCACGTCTGCGTGTACCCGTTCGTGCGCTCCTACGAGTGGTACCTCCTCGAGGACTCCGAGCGCCGCCAC ATGCTCGCCGAGCACGGCAAGATGGCCCGCGACTACCCCGACGTGCGCGCCAACACCGTCTCCAGCTTCGCGCTCGGCGA CTACGAGTGGATGCTGGCCTTCGAGGCCGACGAGCTGCACCGGATCGTGGACCTGATGCGGCACCTGCGCGCGGCCACCG CCCGCCGCCACGTCCGCGAGGAGGTGCCGTTCTACACCGGCGCCCGGACCCCGATCACCGAGCTGGTCCACCGGCTGCCC TGA
Upstream 100 bases:
>100_bases CGGTGAGCGCGACGTGTAGCGGCTGCACGCCGCCGGCCGGGCAGAGGCGATCATCAACGCGCGGGAGGCCGGCTACGGCC GCGATCGAGCGCGGGGGACA
Downstream 100 bases:
>100_bases GCCGGGCGACGGAGCCGGATCCGGGCCGGACCAGACCAGGGAACCGGCCCGGGTCCGGTCGCGTCGTACCGCCATGAGGA CCCTGCTCGCCGCGGTCGCC
Product: chlorite dismutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGPMSAKAKRAREINDSIRYTMWSVFRVADPLGPPDSGADRAAEGAEVEQLFAELEAADVVVRGVYDVAGLRADAELMIW WHAETSEALQDAYQRLRHTALGRRLEPVWSQLALHRPAEFNKSHVPAFLDDEEPPRKHVCVYPFVRSYEWYLLEDSERRH MLAEHGKMARDYPDVRANTVSSFALGDYEWMLAFEADELHRIVDLMRHLRAATARRHVREEVPFYTGARTPITELVHRLP
Sequences:
>Translated_240_residues MGPMSAKAKRAREINDSIRYTMWSVFRVADPLGPPDSGADRAAEGAEVEQLFAELEAADVVVRGVYDVAGLRADAELMIW WHAETSEALQDAYQRLRHTALGRRLEPVWSQLALHRPAEFNKSHVPAFLDDEEPPRKHVCVYPFVRSYEWYLLEDSERRH MLAEHGKMARDYPDVRANTVSSFALGDYEWMLAFEADELHRIVDLMRHLRAATARRHVREEVPFYTGARTPITELVHRLP >Mature_239_residues GPMSAKAKRAREINDSIRYTMWSVFRVADPLGPPDSGADRAAEGAEVEQLFAELEAADVVVRGVYDVAGLRADAELMIWW HAETSEALQDAYQRLRHTALGRRLEPVWSQLALHRPAEFNKSHVPAFLDDEEPPRKHVCVYPFVRSYEWYLLEDSERRHM LAEHGKMARDYPDVRANTVSSFALGDYEWMLAFEADELHRIVDLMRHLRAATARRHVREEVPFYTGARTPITELVHRLP
Specific function: Unknown
COG id: COG3253
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010644 - InterPro: IPR011008 [H]
Pfam domain/function: PF06778 Chlor_dismutase [H]
EC number: NA
Molecular weight: Translated: 27650; Mature: 27518
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPMSAKAKRAREINDSIRYTMWSVFRVADPLGPPDSGADRAAEGAEVEQLFAELEAADV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH VVRGVYDVAGLRADAELMIWWHAETSEALQDAYQRLRHTALGRRLEPVWSQLALHRPAEF HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC NKSHVPAFLDDEEPPRKHVCVYPFVRSYEWYLLEDSERRHMLAEHGKMARDYPDVRANTV CCCCCCCCCCCCCCCCCCEEEEEHHHCEEEEEECCCHHHHHHHHHCCHHCCCCCCHHHHH SSFALGDYEWMLAFEADELHRIVDLMRHLRAATARRHVREEVPFYTGARTPITELVHRLP HHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure GPMSAKAKRAREINDSIRYTMWSVFRVADPLGPPDSGADRAAEGAEVEQLFAELEAADV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH VVRGVYDVAGLRADAELMIWWHAETSEALQDAYQRLRHTALGRRLEPVWSQLALHRPAEF HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC NKSHVPAFLDDEEPPRKHVCVYPFVRSYEWYLLEDSERRHMLAEHGKMARDYPDVRANTV CCCCCCCCCCCCCCCCCCEEEEEHHHCEEEEEECCCHHHHHHHHHCCHHCCCCCCHHHHH SSFALGDYEWMLAFEADELHRIVDLMRHLRAATARRHVREEVPFYTGARTPITELVHRLP HHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA