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The map label for this gene is glpD2 [H]

Identifier: 119717859

GI number: 119717859

Start: 3858439

End: 3860193

Strand: Reverse

Name: glpD2 [H]

Synonym: Noca_3637

Alternate gene names: 119717859

Gene position: 3860193-3858439 (Counterclockwise)

Preceding gene: 119717861

Following gene: 119717858

Centisome position: 77.42

GC content: 73.73

Gene sequence:

>1755_bases
ATGAGCCAGCCCAGCGCCCTCAGCCCGCAGGCCCGCGACCGAGCGCTCGCCGCCATGCGGTCGACCGGCGGCCAGCCCGC
CGGGGTCCGGCCCGAGCTGGACGTCCTGGTCGTCGGCGGCGGCGTGACCGGTGCCGGCACCGCGCTGGACGCGGTGACCC
GCGGCCTGAGCACCGGGCTGCTCGAGCAGCGCGACCTGGCCAGCGGCACCAGCAGCCGCAGCAGCAAGCTGATCCACGGT
GGCCTGCGCTACCTGGAGATGCTCGACTTCGGCCTGGTCCGCGAGGCGCTCCAGGAGCGTGGCCTGCTGCTCACCCGACT
GGCGCCGCACCTGGTCCGGCCGGTCCCGTTCCTCTACCCGCTGACCCATCGCGGCTGGGAGCGCCCCTACGTCGCCGCGG
GGCTCACGCTGTACGACGGGATGGCGGCCCTCGGCGCGCTGCGGAGCCAGGGTGACATGGGGCTGCCGCGGCACAAGCAC
CTGCTGCGCCGCCACGTGGCGCGGATCGCCCCGGACTTCCGGGCGGAGACGATCACCGGTGCGATCCAGTACTGGGACTG
CCAGGTCGACGACGCCCGGCTGGTGGTCACGCTCGCCCGCACCGCCGCCGCCCACGGCGCGCACGTGGCCACTCGGGTCA
AGGTGACCGGGTTCCTCCGCGAGGGCGAGCGGGTGGTCGGCGTACGCGCCCTCGACCTGGAGACCCAGGAGGAGCTCGAG
GTGCGGGCGCGGGTGGTGGTGAACGCCGCCGGCGTGTGGACCGACGAGATCCAGGAGATGGTCGGCGGCCGCGGCGCGCT
GCACGTCCAGGCCAGCAAGGGCATCCACCTCGTCGTGCCGCGCGACCGGATCCGCTCCGAGGCGGGGTTCATCGTGCGCA
CCGCGATCTCCGTGCTGTTCGTGATCCCGTGGGGCCGGCACTGGATCATCGGCACCACCGACACGCCGTGGGACCTGGAC
AAGGCGCACCCCGCGGCGTCGCGGGCCGACATCGACTACGTCCTCGAGCACGTCAACGCGATCCTGCGCGAGCCGCTGGA
CCACGACGACGTCCAGGGCGTGTACGCCGGGCTCCGGCCGCTGCTGTCCGGGGAGTCGGAGCCGACCTCGCGGATCTCCC
GCGAGCACACCGTGGTCACCCCGGTCCCTGGGCTGGTGATGATCGCGGGCGGCAAGCTCACGACCTACCGGGTGATGGGC
AAGGATGCGGTCGACGCGGCCGCACACTCGCTGCGCACCACCGCGAACCTCACCGTCCGCGACTCGATCACCGACAGGGT
GCCGCTGGTCGGCGCCGCCGACTGGGAGACCCGCGCCAACCAGCGGGTGCTCCTCTCGCGTCGTTCGGGGCTGCACGTCG
CCCGGATCGACCACCTCCTCGGCCGCTACGGCGGCCTGGTCGACGACCTGCTCGACCTGGTGGCCACCCGGCCCGAGCTG
GCCGCGCCGCTGGACGGTGCGGACGACTACCTCGCCGCCGAGGTCGTCTACGCCGTCACCCACGAGGGTGCCCGGCACCT
CGACGACCTGCTGACCCGCCGTACCCGCATCTCGATCGAGACCTTCGACCGCGGTGTCCGGGTGGCCTCCGAGGTCGCGC
GGCTGATGGCCGGTGAGCTCGGCTGGGACGACGCCCGCACCGCCGACGAGATCGACCACTACCGGCGCCGGGTCGAGGCC
GAGCGGCAGAGCCAGCTGCAGCTCACCGACCAGGAGGCCGACGAGGCCCGGGTGTCGGCCCCCGACATCGTGTGA

Upstream 100 bases:

>100_bases
CGACGCGGCGCACCGGTCGACCGGCCATGCCTCCATTCAACCGGGTCGGGGCGGCCCGCGGGGCGACATCGCCGATCCCG
ATCTTTGCGAGACTGGGCAT

Downstream 100 bases:

>100_bases
GGGGCGTTGGCCGCGGTCGGTTTCCCCGGTTCACCGGGGAAACCGGAACTGTTGGGCCGAAACTTCGGGCCAACAGTTCC
AACTTCCCCGGTGAACCGGG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSQPSALSPQARDRALAAMRSTGGQPAGVRPELDVLVVGGGVTGAGTALDAVTRGLSTGLLEQRDLASGTSSRSSKLIHG
GLRYLEMLDFGLVREALQERGLLLTRLAPHLVRPVPFLYPLTHRGWERPYVAAGLTLYDGMAALGALRSQGDMGLPRHKH
LLRRHVARIAPDFRAETITGAIQYWDCQVDDARLVVTLARTAAAHGAHVATRVKVTGFLREGERVVGVRALDLETQEELE
VRARVVVNAAGVWTDEIQEMVGGRGALHVQASKGIHLVVPRDRIRSEAGFIVRTAISVLFVIPWGRHWIIGTTDTPWDLD
KAHPAASRADIDYVLEHVNAILREPLDHDDVQGVYAGLRPLLSGESEPTSRISREHTVVTPVPGLVMIAGGKLTTYRVMG
KDAVDAAAHSLRTTANLTVRDSITDRVPLVGAADWETRANQRVLLSRRSGLHVARIDHLLGRYGGLVDDLLDLVATRPEL
AAPLDGADDYLAAEVVYAVTHEGARHLDDLLTRRTRISIETFDRGVRVASEVARLMAGELGWDDARTADEIDHYRRRVEA
ERQSQLQLTDQEADEARVSAPDIV

Sequences:

>Translated_584_residues
MSQPSALSPQARDRALAAMRSTGGQPAGVRPELDVLVVGGGVTGAGTALDAVTRGLSTGLLEQRDLASGTSSRSSKLIHG
GLRYLEMLDFGLVREALQERGLLLTRLAPHLVRPVPFLYPLTHRGWERPYVAAGLTLYDGMAALGALRSQGDMGLPRHKH
LLRRHVARIAPDFRAETITGAIQYWDCQVDDARLVVTLARTAAAHGAHVATRVKVTGFLREGERVVGVRALDLETQEELE
VRARVVVNAAGVWTDEIQEMVGGRGALHVQASKGIHLVVPRDRIRSEAGFIVRTAISVLFVIPWGRHWIIGTTDTPWDLD
KAHPAASRADIDYVLEHVNAILREPLDHDDVQGVYAGLRPLLSGESEPTSRISREHTVVTPVPGLVMIAGGKLTTYRVMG
KDAVDAAAHSLRTTANLTVRDSITDRVPLVGAADWETRANQRVLLSRRSGLHVARIDHLLGRYGGLVDDLLDLVATRPEL
AAPLDGADDYLAAEVVYAVTHEGARHLDDLLTRRTRISIETFDRGVRVASEVARLMAGELGWDDARTADEIDHYRRRVEA
ERQSQLQLTDQEADEARVSAPDIV
>Mature_583_residues
SQPSALSPQARDRALAAMRSTGGQPAGVRPELDVLVVGGGVTGAGTALDAVTRGLSTGLLEQRDLASGTSSRSSKLIHGG
LRYLEMLDFGLVREALQERGLLLTRLAPHLVRPVPFLYPLTHRGWERPYVAAGLTLYDGMAALGALRSQGDMGLPRHKHL
LRRHVARIAPDFRAETITGAIQYWDCQVDDARLVVTLARTAAAHGAHVATRVKVTGFLREGERVVGVRALDLETQEELEV
RARVVVNAAGVWTDEIQEMVGGRGALHVQASKGIHLVVPRDRIRSEAGFIVRTAISVLFVIPWGRHWIIGTTDTPWDLDK
AHPAASRADIDYVLEHVNAILREPLDHDDVQGVYAGLRPLLSGESEPTSRISREHTVVTPVPGLVMIAGGKLTTYRVMGK
DAVDAAAHSLRTTANLTVRDSITDRVPLVGAADWETRANQRVLLSRRSGLHVARIDHLLGRYGGLVDDLLDLVATRPELA
APLDGADDYLAAEVVYAVTHEGARHLDDLLTRRTRISIETFDRGVRVASEVARLMAGELGWDDARTADEIDHYRRRVEAE
RQSQLQLTDQEADEARVSAPDIV

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=598, Percent_Identity=35.1170568561873, Blast_Score=305, Evalue=1e-82,
Organism=Homo sapiens, GI285002231, Length=598, Percent_Identity=35.1170568561873, Blast_Score=305, Evalue=1e-82,
Organism=Escherichia coli, GI2367226, Length=476, Percent_Identity=33.4033613445378, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1788574, Length=393, Percent_Identity=29.7709923664122, Blast_Score=118, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17509253, Length=576, Percent_Identity=34.375, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI115534726, Length=550, Percent_Identity=33.2727272727273, Blast_Score=235, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6322036, Length=620, Percent_Identity=30.1612903225806, Blast_Score=228, Evalue=2e-60,
Organism=Drosophila melanogaster, GI161077125, Length=575, Percent_Identity=32.8695652173913, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI24653942, Length=575, Percent_Identity=32.8695652173913, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI24653944, Length=575, Percent_Identity=32.8695652173913, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI20130025, Length=575, Percent_Identity=32.8695652173913, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI24586295, Length=570, Percent_Identity=30.8771929824561, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI19921278, Length=546, Percent_Identity=29.1208791208791, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI45550977, Length=399, Percent_Identity=27.0676691729323, Blast_Score=119, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 63742; Mature: 63611

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00977 FAD_G3PDH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPSALSPQARDRALAAMRSTGGQPAGVRPELDVLVVGGGVTGAGTALDAVTRGLSTGL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC
LEQRDLASGTSSRSSKLIHGGLRYLEMLDFGLVREALQERGLLLTRLAPHLVRPVPFLYP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEC
LTHRGWERPYVAAGLTLYDGMAALGALRSQGDMGLPRHKHLLRRHVARIAPDFRAETITG
CCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEE
AIQYWDCQVDDARLVVTLARTAAAHGAHVATRVKVTGFLREGERVVGVRALDLETQEELE
EEEEEECCCCCCEEEEEEHHHHHHCCCHHEEEEEEEHHHHCCCEEEEEEEECCCCHHHHH
VRARVVVNAAGVWTDEIQEMVGGRGALHVQASKGIHLVVPRDRIRSEAGFIVRTAISVLF
HHHHHEEEECCCCHHHHHHHHCCCCEEEEEECCCEEEEECHHHHHHHCCHHHHHHHHHHE
VIPWGRHWIIGTTDTPWDLDKAHPAASRADIDYVLEHVNAILREPLDHDDVQGVYAGLRP
EEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLSGESEPTSRISREHTVVTPVPGLVMIAGGKLTTYRVMGKDAVDAAAHSLRTTANLTVR
HHCCCCCCHHHHCCCCEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCEEEE
DSITDRVPLVGAADWETRANQRVLLSRRSGLHVARIDHLLGRYGGLVDDLLDLVATRPEL
CCCCCCCCEEECCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AAPLDGADDYLAAEVVYAVTHEGARHLDDLLTRRTRISIETFDRGVRVASEVARLMAGEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCC
GWDDARTADEIDHYRRRVEAERQSQLQLTDQEADEARVSAPDIV
CCCCCCCHHHHHHHHHHHHHHHHHHCEECCCCHHHHCCCCCCCC
>Mature Secondary Structure 
SQPSALSPQARDRALAAMRSTGGQPAGVRPELDVLVVGGGVTGAGTALDAVTRGLSTGL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC
LEQRDLASGTSSRSSKLIHGGLRYLEMLDFGLVREALQERGLLLTRLAPHLVRPVPFLYP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEC
LTHRGWERPYVAAGLTLYDGMAALGALRSQGDMGLPRHKHLLRRHVARIAPDFRAETITG
CCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEE
AIQYWDCQVDDARLVVTLARTAAAHGAHVATRVKVTGFLREGERVVGVRALDLETQEELE
EEEEEECCCCCCEEEEEEHHHHHHCCCHHEEEEEEEHHHHCCCEEEEEEEECCCCHHHHH
VRARVVVNAAGVWTDEIQEMVGGRGALHVQASKGIHLVVPRDRIRSEAGFIVRTAISVLF
HHHHHEEEECCCCHHHHHHHHCCCCEEEEEECCCEEEEECHHHHHHHCCHHHHHHHHHHE
VIPWGRHWIIGTTDTPWDLDKAHPAASRADIDYVLEHVNAILREPLDHDDVQGVYAGLRP
EEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLSGESEPTSRISREHTVVTPVPGLVMIAGGKLTTYRVMGKDAVDAAAHSLRTTANLTVR
HHCCCCCCHHHHCCCCEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCEEEE
DSITDRVPLVGAADWETRANQRVLLSRRSGLHVARIDHLLGRYGGLVDDLLDLVATRPEL
CCCCCCCCEEECCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AAPLDGADDYLAAEVVYAVTHEGARHLDDLLTRRTRISIETFDRGVRVASEVARLMAGEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCC
GWDDARTADEIDHYRRRVEAERQSQLQLTDQEADEARVSAPDIV
CCCCCCCHHHHHHHHHHHHHHHHHHCEECCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]