Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717838

Identifier: 119717838

GI number: 119717838

Start: 3831968

End: 3832363

Strand: Reverse

Name: 119717838

Synonym: Noca_3616

Alternate gene names: NA

Gene position: 3832363-3831968 (Counterclockwise)

Preceding gene: 119717842

Following gene: 119717836

Centisome position: 76.86

GC content: 69.95

Gene sequence:

>396_bases
GTGGAACAGGGCGTTCTGGGCCTCGGACTGTCGGTGGCCCCTGATCTAGTGGAAGCCATGAAGGCACCCGTGGCGAACAC
CCCGAGGACCGGTTCAGTCGACCGGGTCCTCGGTGCCGCGCGTGCCGTGCGCGCCGACCTGACCGCCGCGGAGGCGCGCC
GCTTCGAGATCGCCGCCGACTGCGCCGCCCTGCACCCGGGTGAGGAGGTCGACCACATCATCCCCTGGCCCCTCGGCCCT
ACCGCGACGTCGAACCTCGCCCCGATCTGCCGGCTGCACCACCGGCTGAAGACCACCGGCGGCTGGACCTACCACCGCCA
CACCCGCAGCACCTTCGAATGGACCAGCCCCCACCACCGCACCTACGTCGTCACGTCCTCACGACATATCCACTGA

Upstream 100 bases:

>100_bases
AGCGTCGTCGAGACCCCGGAAGTAAAGGCAGAGCGGCGACCATGCAAGCCGTTCGAAGGTGGCCGCGCAAGGTCTTTGCT
TTCGAATCTCCCAGGGCCCT

Downstream 100 bases:

>100_bases
CCCCACCCCGCCGACCAGGCCGGCGGGGACAGCGTCATGTCTCAGCTCCGTGGGCGACGACCGCGCCAATTGGTGAGCGT
GCATCGCCGACGACTCGGCT

Product: HNH endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MEQGVLGLGLSVAPDLVEAMKAPVANTPRTGSVDRVLGAARAVRADLTAAEARRFEIAADCAALHPGEEVDHIIPWPLGP
TATSNLAPICRLHHRLKTTGGWTYHRHTRSTFEWTSPHHRTYVVTSSRHIH

Sequences:

>Translated_131_residues
MEQGVLGLGLSVAPDLVEAMKAPVANTPRTGSVDRVLGAARAVRADLTAAEARRFEIAADCAALHPGEEVDHIIPWPLGP
TATSNLAPICRLHHRLKTTGGWTYHRHTRSTFEWTSPHHRTYVVTSSRHIH
>Mature_131_residues
MEQGVLGLGLSVAPDLVEAMKAPVANTPRTGSVDRVLGAARAVRADLTAAEARRFEIAADCAALHPGEEVDHIIPWPLGP
TATSNLAPICRLHHRLKTTGGWTYHRHTRSTFEWTSPHHRTYVVTSSRHIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14325; Mature: 14325

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGVLGLGLSVAPDLVEAMKAPVANTPRTGSVDRVLGAARAVRADLTAAEARRFEIAAD
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAALHPGEEVDHIIPWPLGPTATSNLAPICRLHHRLKTTGGWTYHRHTRSTFEWTSPHHR
HHHCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCE
TYVVTSSRHIH
EEEEECCCCCC
>Mature Secondary Structure
MEQGVLGLGLSVAPDLVEAMKAPVANTPRTGSVDRVLGAARAVRADLTAAEARRFEIAAD
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAALHPGEEVDHIIPWPLGPTATSNLAPICRLHHRLKTTGGWTYHRHTRSTFEWTSPHHR
HHHCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCE
TYVVTSSRHIH
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA