Click here to switch to the map view.

The map label for this gene is 119717771

Identifier: 119717771

GI number: 119717771

Start: 3763276

End: 3764109

Strand: Reverse

Name: 119717771

Synonym: Noca_3549

Alternate gene names: NA

Gene position: 3764109-3763276 (Counterclockwise)

Preceding gene: 119717776

Following gene: 119717770

Centisome position: 75.5

GC content: 68.11

Gene sequence:

>834_bases
GTGGCGATGGCGTCGACGGACGCACCCAGCACGACCCCAGGATCGACAGGTGTGGACGGGCCCACGCGAGCCCGGATCGG
CGCGAGGACGTTGCGCGAGGACCGGTGGTGGCTCGTGCCGCTCGCCACGTTCGTCGTGTTCAGCGGCTTCGTCCTGTTCG
CCACCTACCGGGCGTTCGCGGGCGACAACTTCTACTCCGAGCCGTACCTCTCGCCGTTCTTCTCGCCCTGCCTCACGGCG
GACTGCGTGGCCGGGTCCTCGGACTTCGGCCGACCGCTGTCGTGGTGGAACCTGTCGCCGGCGCTGGTGATCCTGATCTT
CCCGCTGGGCTTCCGGATGACGTGCTACTACTACCGCAAGGCGTACTACCGCGCGTTCTGGCTCTCCCCGCCCGCGTGCG
CGGTCGCCGAGCCGCACGGCGCCTACTCCGGCGAGACCCGCTTCCCGCTGATCCTGCAGAACCTGCACCGCTGGTTCTGG
TACGCCGCCGTGGTGATCGCGCTGATCCTGACCTGGGACACGGTGCTGGCCTTCGGCCCGGCACCGGGTGAGCCCGACGG
GATCCACATGGGCCTGGGCACCCTGCTGATGATCGCCAACGTGGTGCTGATCTGGCTGTACACGCTCGGCTGCCACTCCT
GCCGTCACATCACGGGCGGCCGGCTCCGGCACTTCTCCAAGCACCCGGTCCGCTACCGGATGTGGACGCTGGTCTCGAGG
CTGAACGCCCGGCACGGCACCTACGCGTGGTACTCGCTGTTCTCGGTCGCGATCGTGGACTTCTACATCTACCTGCTCGC
CACCGGGGCCTTCGACGACCCGAGGTTCTTTTGA

Upstream 100 bases:

>100_bases
GTCGGGTGAACCTCGCCCGTGTGGCCTCTTTCACATCCGGCCGCGAGTGTGCAGACTCACCTAGGCAACACCCAAGGCAC
GAGCACCGGAGCCGGCGGAG

Downstream 100 bases:

>100_bases
ACCACCCCACGAAGTTCCCAGCTCCCCCGCTTCGCTCCTCCGCTGACAACTCCGCGGGGACCCCGGAAGGCCACAGATGA
CTGAACCCCAGACCAGACAC

Product: integral membrane protein

Products: NA

Alternate protein names: Succinate Dehydrogenase; Succinate Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MAMASTDAPSTTPGSTGVDGPTRARIGARTLREDRWWLVPLATFVVFSGFVLFATYRAFAGDNFYSEPYLSPFFSPCLTA
DCVAGSSDFGRPLSWWNLSPALVILIFPLGFRMTCYYYRKAYYRAFWLSPPACAVAEPHGAYSGETRFPLILQNLHRWFW
YAAVVIALILTWDTVLAFGPAPGEPDGIHMGLGTLLMIANVVLIWLYTLGCHSCRHITGGRLRHFSKHPVRYRMWTLVSR
LNARHGTYAWYSLFSVAIVDFYIYLLATGAFDDPRFF

Sequences:

>Translated_277_residues
MAMASTDAPSTTPGSTGVDGPTRARIGARTLREDRWWLVPLATFVVFSGFVLFATYRAFAGDNFYSEPYLSPFFSPCLTA
DCVAGSSDFGRPLSWWNLSPALVILIFPLGFRMTCYYYRKAYYRAFWLSPPACAVAEPHGAYSGETRFPLILQNLHRWFW
YAAVVIALILTWDTVLAFGPAPGEPDGIHMGLGTLLMIANVVLIWLYTLGCHSCRHITGGRLRHFSKHPVRYRMWTLVSR
LNARHGTYAWYSLFSVAIVDFYIYLLATGAFDDPRFF
>Mature_276_residues
AMASTDAPSTTPGSTGVDGPTRARIGARTLREDRWWLVPLATFVVFSGFVLFATYRAFAGDNFYSEPYLSPFFSPCLTAD
CVAGSSDFGRPLSWWNLSPALVILIFPLGFRMTCYYYRKAYYRAFWLSPPACAVAEPHGAYSGETRFPLILQNLHRWFWY
AAVVIALILTWDTVLAFGPAPGEPDGIHMGLGTLLMIANVVLIWLYTLGCHSCRHITGGRLRHFSKHPVRYRMWTLVSRL
NARHGTYAWYSLFSVAIVDFYIYLLATGAFDDPRFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31292; Mature: 31161

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AMASTDAPSTTPGSTGVDGPTRARIGARTLREDRWWLVPLATFVVFSGFVLFATYRAFA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH
GDNFYSEPYLSPFFSPCLTADCVAGSSDFGRPLSWWNLSPALVILIFPLGFRMTCYYYRK
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYYRAFWLSPPACAVAEPHGAYSGETRFPLILQNLHRWFWYAAVVIALILTWDTVLAFGP
HHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APGEPDGIHMGLGTLLMIANVVLIWLYTLGCHSCRHITGGRLRHFSKHPVRYRMWTLVSR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHH
LNARHGTYAWYSLFSVAIVDFYIYLLATGAFDDPRFF
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA