| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cenA [H]
Identifier: 119717723
GI number: 119717723
Start: 3709635
End: 3710675
Strand: Reverse
Name: cenA [H]
Synonym: Noca_3501
Alternate gene names: 119717723
Gene position: 3710675-3709635 (Counterclockwise)
Preceding gene: 119717724
Following gene: 119717722
Centisome position: 74.42
GC content: 75.7
Gene sequence:
>1041_bases GTGCGCCGCCGCCCCTCGCCGACCGCCTCGTCGATCCGGCCCCCGGTCCTGATGCTGGTCGCCCTGGTGGCCGCCGTGCT CGCGCTCGGCGGGTGCTCGGGCGGCGGCGAGCCGGACGACGCGCCGAGCAGCGCGGACCCGGTCGCGGACAACCCCTACG CGGGCCGGACCGGCTTCGCCGACCCGGCCTCGCGGACCGCCCAGGCCGCAGCGCAGGCGAAGGCGGATGGTGACGTCGAG GCGGAGCGGGTCCTCTCCCGGCTCGCCAGCACGCCGCAAGGCATCTGGCTGACGCCCGAGGAGTACCCGCCCGGCTCGGT CGCGCCGTTGGTCGCGCGGGTCGTCCGGGCCGCCGACGCAGCCGGCCAGGTGCCGACGTTCGTCGTGTACGGCATCCCCG ACCGCGACTGCACCGGCGGCTTCTCCGGCGGTGGCCTGACCGCGGACCAGTACGGGCCCTGGGTGCAGGAGATCGCGGAC GCCGTCTCGGGCGCCGACCCCTCGGTCCCGGTCGTGGCGGTCGTCGAGCCGGACGCGCTCGCCTCGGCGATCGCGTGCGA CCGCCGCTCGGAGCGGGTGCGGCTGATCGCCGACGCCGTGACCCGGCTCGCCGACGCCGAGGTGACGACCTACGTCGACG GCGGCCACTCGCACTGGATCGAGCCGGATCAGCTGGCGAGGCTGCTCGAGCAGGCCGGGATCGACCAGGCCCGGGGCTTC GCCACCAACGTCTCGAACTACCAGACCGACGCCGACGAGCGTGCGTACGGCGAGCAGCTCAGCGCCCTGCTCGACGGAGC CCACTACATCGTCGACACCGGACGGAACGGCAACGGCTCGACCGAGGATTGGTGCAACCCGACCGGTCGGGCCTACGGCA CCGACCCGGCGCCGGCGCCGGAGGGCGACGCGGAGCACCTCGACGCCTACGTCTGGGTCAAGCCGCCGGGGGAGAGCGAC GGCGAGTGCGGAGGCGGGCCGCCCGCCGGGCGCTTCTGGCGTGAGCGGGCGCTGGAGATGGCCGTCTCGTCCGGGTGGTG A
Upstream 100 bases:
>100_bases CCGGGGCCGTGGCGGTTGCGACACTCGCCGCGCTGCTCGCTCCCGGCAGGGGGAGGCGGGCCACCCCTCGGGCCTGACGG CCCTCGGGCATGATGGCGCG
Downstream 100 bases:
>100_bases GAATCACCCGACCCGGGCAGAACACCGGCGCGCGGGCGCCGGGCCTTTCGGTGCGGACAGGCGCGCGTTGTTAGCATTCG CCACATGCAGGCGGGCAGCG
Product: cellulase
Products: NA
Alternate protein names: Cellulase A; Endo-1,4-beta-glucanase A [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRRRPSPTASSIRPPVLMLVALVAAVLALGGCSGGGEPDDAPSSADPVADNPYAGRTGFADPASRTAQAAAQAKADGDVE AERVLSRLASTPQGIWLTPEEYPPGSVAPLVARVVRAADAAGQVPTFVVYGIPDRDCTGGFSGGGLTADQYGPWVQEIAD AVSGADPSVPVVAVVEPDALASAIACDRRSERVRLIADAVTRLADAEVTTYVDGGHSHWIEPDQLARLLEQAGIDQARGF ATNVSNYQTDADERAYGEQLSALLDGAHYIVDTGRNGNGSTEDWCNPTGRAYGTDPAPAPEGDAEHLDAYVWVKPPGESD GECGGGPPAGRFWRERALEMAVSSGW
Sequences:
>Translated_346_residues MRRRPSPTASSIRPPVLMLVALVAAVLALGGCSGGGEPDDAPSSADPVADNPYAGRTGFADPASRTAQAAAQAKADGDVE AERVLSRLASTPQGIWLTPEEYPPGSVAPLVARVVRAADAAGQVPTFVVYGIPDRDCTGGFSGGGLTADQYGPWVQEIAD AVSGADPSVPVVAVVEPDALASAIACDRRSERVRLIADAVTRLADAEVTTYVDGGHSHWIEPDQLARLLEQAGIDQARGF ATNVSNYQTDADERAYGEQLSALLDGAHYIVDTGRNGNGSTEDWCNPTGRAYGTDPAPAPEGDAEHLDAYVWVKPPGESD GECGGGPPAGRFWRERALEMAVSSGW >Mature_346_residues MRRRPSPTASSIRPPVLMLVALVAAVLALGGCSGGGEPDDAPSSADPVADNPYAGRTGFADPASRTAQAAAQAKADGDVE AERVLSRLASTPQGIWLTPEEYPPGSVAPLVARVVRAADAAGQVPTFVVYGIPDRDCTGGFSGGGLTADQYGPWVQEIAD AVSGADPSVPVVAVVEPDALASAIACDRRSERVRLIADAVTRLADAEVTTYVDGGHSHWIEPDQLARLLEQAGIDQARGF ATNVSNYQTDADERAYGEQLSALLDGAHYIVDTGRNGNGSTEDWCNPTGRAYGTDPAPAPEGDAEHLDAYVWVKPPGESD GECGGGPPAGRFWRERALEMAVSSGW
Specific function: The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes:(1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing e
COG id: COG5297
COG function: function code G; Cellobiohydrolase A (1,4-beta-cellobiosidase A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016288 - InterPro: IPR008965 - InterPro: IPR012291 - InterPro: IPR018366 - InterPro: IPR001919 - InterPro: IPR001524 - InterPro: IPR006311 [H]
Pfam domain/function: PF00553 CBM_2; PF01341 Glyco_hydro_6 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 35992; Mature: 35992
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00656 GLYCOSYL_HYDROL_F6_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRPSPTASSIRPPVLMLVALVAAVLALGGCSGGGEPDDAPSSADPVADNPYAGRTGFA CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPASRTAQAAAQAKADGDVEAERVLSRLASTPQGIWLTPEEYPPGSVAPLVARVVRAADA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHC AGQVPTFVVYGIPDRDCTGGFSGGGLTADQYGPWVQEIADAVSGADPSVPVVAVVEPDAL CCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEECCHHH ASAIACDRRSERVRLIADAVTRLADAEVTTYVDGGHSHWIEPDQLARLLEQAGIDQARGF HHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHCCC ATNVSNYQTDADERAYGEQLSALLDGAHYIVDTGRNGNGSTEDWCNPTGRAYGTDPAPAP HHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCC EGDAEHLDAYVWVKPPGESDGECGGGPPAGRFWRERALEMAVSSGW CCCHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRRPSPTASSIRPPVLMLVALVAAVLALGGCSGGGEPDDAPSSADPVADNPYAGRTGFA CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPASRTAQAAAQAKADGDVEAERVLSRLASTPQGIWLTPEEYPPGSVAPLVARVVRAADA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHC AGQVPTFVVYGIPDRDCTGGFSGGGLTADQYGPWVQEIADAVSGADPSVPVVAVVEPDAL CCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEECCHHH ASAIACDRRSERVRLIADAVTRLADAEVTTYVDGGHSHWIEPDQLARLLEQAGIDQARGF HHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHCCC ATNVSNYQTDADERAYGEQLSALLDGAHYIVDTGRNGNGSTEDWCNPTGRAYGTDPAPAP HHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCC EGDAEHLDAYVWVKPPGESDGECGGGPPAGRFWRERALEMAVSSGW CCCHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3023193; 2681184; 1761039 [H]