| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717715
Identifier: 119717715
GI number: 119717715
Start: 3702111
End: 3702611
Strand: Reverse
Name: 119717715
Synonym: Noca_3493
Alternate gene names: NA
Gene position: 3702611-3702111 (Counterclockwise)
Preceding gene: 119717716
Following gene: 119717714
Centisome position: 74.26
GC content: 67.27
Gene sequence:
>501_bases GTGGCCATCTCGCACAAGCTGCTGAACGAGGGTGAGACCGTCGTCGTCGACACCCGTACGCACGTCAAGGCGCTGATCGT CCCGCTCCTCGTCCTGGTCGTCCTGCTGGCGATCGGCACCTTCGTCCAGGTCCAGTGGGACCAGACGCTCGCGTACGTGG TGTGGGCGGTCGTGGCGGTCGGGATCATCTGGTACGTGCTGCGCCCGGCGATCATCTGGGCGACCGCGTCGTACACGTTC ACGAACCGGCGGCTGATCACCCGCAGCGGCGTGCTCGTGCGGCGGGGCCACGACATGCCGCTGGCGCGGATCAGCGACAT CGCCTACGAGTTCGGGTTGATCGACCGGATGCTCGGCTGCGGGACGCTGATCATCTCCGACGCCAGCGAGCACGGGCAGA TCCGGCTGCACGACATCCCGCGGGTCGAGGAGACCCAGCGCAAGGTCAACGCCATGCTGCAGAGCCTCAACCACCCCTCG GCAGGACATGACGGGACCTGA
Upstream 100 bases:
>100_bases GGCCGGGCGCCTGGTGGTGCTGGGCGCGGACGGCGAGACCGTCGTCGGCGCGGGTGACGTAGTGCACGTGCGCGCCGCCG ATCAGTGACATGATCGGCGC
Downstream 100 bases:
>100_bases CGACGACCCGAGCGGGTCGGAGCCCGCACCGACCTCGGAGGACCTCGAGCGAGCGATCCTCGGCGAGACGCCTACCTTCA ACGCCCAGGAGGTCGCGGCC
Product: membrane-flanked domain-containing protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein; Membrane Flanked Domain-Containing Protein; Membrane-Flanked Domain; Integral Membrane Protein
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MAISHKLLNEGETVVVDTRTHVKALIVPLLVLVVLLAIGTFVQVQWDQTLAYVVWAVVAVGIIWYVLRPAIIWATASYTF TNRRLITRSGVLVRRGHDMPLARISDIAYEFGLIDRMLGCGTLIISDASEHGQIRLHDIPRVEETQRKVNAMLQSLNHPS AGHDGT
Sequences:
>Translated_166_residues MAISHKLLNEGETVVVDTRTHVKALIVPLLVLVVLLAIGTFVQVQWDQTLAYVVWAVVAVGIIWYVLRPAIIWATASYTF TNRRLITRSGVLVRRGHDMPLARISDIAYEFGLIDRMLGCGTLIISDASEHGQIRLHDIPRVEETQRKVNAMLQSLNHPS AGHDGT >Mature_165_residues AISHKLLNEGETVVVDTRTHVKALIVPLLVLVVLLAIGTFVQVQWDQTLAYVVWAVVAVGIIWYVLRPAIIWATASYTFT NRRLITRSGVLVRRGHDMPLARISDIAYEFGLIDRMLGCGTLIISDASEHGQIRLHDIPRVEETQRKVNAMLQSLNHPSA GHDGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18473; Mature: 18342
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISHKLLNEGETVVVDTRTHVKALIVPLLVLVVLLAIGTFVQVQWDQTLAYVVWAVVAV CCCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH GIIWYVLRPAIIWATASYTFTNRRLITRSGVLVRRGHDMPLARISDIAYEFGLIDRMLGC HHHHHHHHHHHHHHCCCEEECCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC GTLIISDASEHGQIRLHDIPRVEETQRKVNAMLQSLNHPSAGHDGT CEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AISHKLLNEGETVVVDTRTHVKALIVPLLVLVVLLAIGTFVQVQWDQTLAYVVWAVVAV CCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH GIIWYVLRPAIIWATASYTFTNRRLITRSGVLVRRGHDMPLARISDIAYEFGLIDRMLGC HHHHHHHHHHHHHHCCCEEECCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC GTLIISDASEHGQIRLHDIPRVEETQRKVNAMLQSLNHPSAGHDGT CEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA