| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119717700
Identifier: 119717700
GI number: 119717700
Start: 3687845
End: 3688327
Strand: Reverse
Name: 119717700
Synonym: Noca_3478
Alternate gene names: NA
Gene position: 3688327-3687845 (Counterclockwise)
Preceding gene: 119717701
Following gene: 119717699
Centisome position: 73.98
GC content: 74.12
Gene sequence:
>483_bases GTGACCCAGTCGTCGAGGGCCGAGCGAGAGCTGAGCGCCGCGGCCACCATCCAGGCGCCACCCGAGCGGGTGTGGGCCCT GGTCACCGACTTCGACCGGATGCCCGAGTGGAGTCCGGAGCTGGTCCGGATGATCCCCCTCAAGCCCGGCGGGCTCCGGG TCGGGCAGTGGTACCTCGGCATCAACCGCCGCAAGGCGGCCGTGTGGCCCACGCGCAACGTCGTCTCCGCCCTGGAGCCG GGGCTCCGGATCGCCTGGGACACCGTCTCGAGCGGCGCCCGGTGGATCTGGGAGCTGACCCCGGACGGACCCGACGGGAC CGCCACCCGGGTGGTGCACCGCCGGCCGGTCCCGAAGCGGCTCACCCTGGTGAGCAAGGTCTTCGCACCGCTCGCCCTGG GTGGCAGCGAGGGGCACGCCGACGAGCTCGAGGAGGCCATGGCTCGCACCGTGGCCCGGCTGAAGGCCGCCGCCGAGGCG TGA
Upstream 100 bases:
>100_bases GCCGACGTGCTGCACGTGGGCCGCACCGACCACTTCGGGCTGCTCAACCACCCTGAGGTGCACCGTGCCCTCCGGGACTG GCTCTGCCAGACTGCCTGAC
Downstream 100 bases:
>100_bases CTTATCTGCTGTCGGCGAACAGCGGGGGATTGGCAGTGGTTCTGTCCTCCCTTCCGGCTAGGGTCGCTCTCGTGACCCAG AACTCCAGCCCACAGCTCAA
Product: cyclase/dehydrase
Products: NA
Alternate protein names: Polyketide Cyclase/Dehydrase; Activator Of; Polyketide Cylcase/Dehydrase
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTQSSRAERELSAAATIQAPPERVWALVTDFDRMPEWSPELVRMIPLKPGGLRVGQWYLGINRRKAAVWPTRNVVSALEP GLRIAWDTVSSGARWIWELTPDGPDGTATRVVHRRPVPKRLTLVSKVFAPLALGGSEGHADELEEAMARTVARLKAAAEA
Sequences:
>Translated_160_residues MTQSSRAERELSAAATIQAPPERVWALVTDFDRMPEWSPELVRMIPLKPGGLRVGQWYLGINRRKAAVWPTRNVVSALEP GLRIAWDTVSSGARWIWELTPDGPDGTATRVVHRRPVPKRLTLVSKVFAPLALGGSEGHADELEEAMARTVARLKAAAEA >Mature_159_residues TQSSRAERELSAAATIQAPPERVWALVTDFDRMPEWSPELVRMIPLKPGGLRVGQWYLGINRRKAAVWPTRNVVSALEPG LRIAWDTVSSGARWIWELTPDGPDGTATRVVHRRPVPKRLTLVSKVFAPLALGGSEGHADELEEAMARTVARLKAAAEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17626; Mature: 17495
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSSRAERELSAAATIQAPPERVWALVTDFDRMPEWSPELVRMIPLKPGGLRVGQWYLG CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEEC INRRKAAVWPTRNVVSALEPGLRIAWDTVSSGARWIWELTPDGPDGTATRVVHRRPVPKR CCCCCEECCCCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHCCCCCHH LTLVSKVFAPLALGGSEGHADELEEAMARTVARLKAAAEA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQSSRAERELSAAATIQAPPERVWALVTDFDRMPEWSPELVRMIPLKPGGLRVGQWYLG CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEEC INRRKAAVWPTRNVVSALEPGLRIAWDTVSSGARWIWELTPDGPDGTATRVVHRRPVPKR CCCCCEECCCCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHCCCCCHH LTLVSKVFAPLALGGSEGHADELEEAMARTVARLKAAAEA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA