| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119717689
Identifier: 119717689
GI number: 119717689
Start: 3675684
End: 3676370
Strand: Reverse
Name: 119717689
Synonym: Noca_3467
Alternate gene names: NA
Gene position: 3676370-3675684 (Counterclockwise)
Preceding gene: 119717691
Following gene: 119717688
Centisome position: 73.74
GC content: 77.44
Gene sequence:
>687_bases GTGACCAGCTCCACGCCCCGATCCCCGCTCTCGCCCACCGCCCGCACCACCGTCGGCCGCGGCCGCAACCGCGCCGTCGA CGACCGGGCCGAGCTGCACCGGTTGCTCGAGGACGCGCTGGTCGCCCACCTCGGCGTGGTCGTCGGTGACCACCCGCTGG TCCTCCCCGTCGCGTTCGGGGTCGACCTCGACGGTCCGGACCGCGACGGCACCCTCTACCTGCACGGCTCCGTCGCGGCC GGGTGGGCCCGGGCGGCGGCGGGGGCGACGGTCTGCGTCACGCTGACCGAGCTCGACGGGCTGGTGCTCGGCCGCTCGGC CTTCCACCACTCGATGAACTACCGCAGCGCGGTCGTGGTCGGCCCGGCCCGGCTGGTCGACGACCCGGCCGAGCGGGACC GGGCGCTGGCCCTGGTCGTCGACCACATGGTCCCGGGACGTACGGCGACCCTGCGACCCTCGACCCGCAAGGAGCTCGCC GCCACCGCGGTGCTCGCCGTACCCCTCCACGAGGCGTCGATGAAGGCCCGCGCCGGTGGCCCGGGCGACGAGCCCGAGGA CGTGGCGGCGGGCGGCTGGGGCGGCCACGTCCCGATCCGCCGGGTAGCGGGCCTGCCGGTGCCCGACCCCGACGCCGTCG GCCCGGTCCCCGCGGAGATCCAGCGGGCGGCCGAGTCCCGCGGATGA
Upstream 100 bases:
>100_bases GCGGTCCAGCCGGAGCGGCAGGGTGGGCATCGGATTGTCCTGTCGGAATCGCCTCGGATTGGCCCGTGTGCGCAGGCCAC TTCTCCACGATCCTAGGGCG
Downstream 100 bases:
>100_bases GCGGCCCAAAGCCCTGCCGCTGAGCGCCGAAGGGCCCTCGTGGCGGCCCCCTCGCCGCTCGCTAGGGTGCGGACCATGAG TCTGCGCACCCTCGTCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTSSTPRSPLSPTARTTVGRGRNRAVDDRAELHRLLEDALVAHLGVVVGDHPLVLPVAFGVDLDGPDRDGTLYLHGSVAA GWARAAAGATVCVTLTELDGLVLGRSAFHHSMNYRSAVVVGPARLVDDPAERDRALALVVDHMVPGRTATLRPSTRKELA ATAVLAVPLHEASMKARAGGPGDEPEDVAAGGWGGHVPIRRVAGLPVPDPDAVGPVPAEIQRAAESRG
Sequences:
>Translated_228_residues MTSSTPRSPLSPTARTTVGRGRNRAVDDRAELHRLLEDALVAHLGVVVGDHPLVLPVAFGVDLDGPDRDGTLYLHGSVAA GWARAAAGATVCVTLTELDGLVLGRSAFHHSMNYRSAVVVGPARLVDDPAERDRALALVVDHMVPGRTATLRPSTRKELA ATAVLAVPLHEASMKARAGGPGDEPEDVAAGGWGGHVPIRRVAGLPVPDPDAVGPVPAEIQRAAESRG >Mature_227_residues TSSTPRSPLSPTARTTVGRGRNRAVDDRAELHRLLEDALVAHLGVVVGDHPLVLPVAFGVDLDGPDRDGTLYLHGSVAAG WARAAAGATVCVTLTELDGLVLGRSAFHHSMNYRSAVVVGPARLVDDPAERDRALALVVDHMVPGRTATLRPSTRKELAA TAVLAVPLHEASMKARAGGPGDEPEDVAAGGWGGHVPIRRVAGLPVPDPDAVGPVPAEIQRAAESRG
Specific function: Unknown
COG id: COG3467
COG function: function code R; Predicted flavin-nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23678; Mature: 23547
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSTPRSPLSPTARTTVGRGRNRAVDDRAELHRLLEDALVAHLGVVVGDHPLVLPVAFG CCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC VDLDGPDRDGTLYLHGSVAAGWARAAAGATVCVTLTELDGLVLGRSAFHHSMNYRSAVVV CCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEEHHCCHHHHHHHHHHCCCCCEEEEE GPARLVDDPAERDRALALVVDHMVPGRTATLRPSTRKELAATAVLAVPLHEASMKARAGG CCHHHHCCHHHHHHEEEEEEHHCCCCCCEEECCCHHHHHHHHHHEEEECHHHHHHHCCCC PGDEPEDVAAGGWGGHVPIRRVAGLPVPDPDAVGPVPAEIQRAAESRG CCCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure TSSTPRSPLSPTARTTVGRGRNRAVDDRAELHRLLEDALVAHLGVVVGDHPLVLPVAFG CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC VDLDGPDRDGTLYLHGSVAAGWARAAAGATVCVTLTELDGLVLGRSAFHHSMNYRSAVVV CCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEEHHCCHHHHHHHHHHCCCCCEEEEE GPARLVDDPAERDRALALVVDHMVPGRTATLRPSTRKELAATAVLAVPLHEASMKARAGG CCHHHHCCHHHHHHEEEEEEHHCCCCCCEEECCCHHHHHHHHHHEEEECHHHHHHHCCCC PGDEPEDVAAGGWGGHVPIRRVAGLPVPDPDAVGPVPAEIQRAAESRG CCCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA