| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717686
Identifier: 119717686
GI number: 119717686
Start: 3672967
End: 3673875
Strand: Reverse
Name: 119717686
Synonym: Noca_3464
Alternate gene names: NA
Gene position: 3673875-3672967 (Counterclockwise)
Preceding gene: 119717687
Following gene: 119717685
Centisome position: 73.69
GC content: 74.26
Gene sequence:
>909_bases ATGTCCCGCGAGCGCCGCTGGCGCAGCCCGGGCGAGCCCCCGCCCTCGTCGTCGGCGCTGTTGGTCGCCCTGGTGCTGGC CTGCCTGAGCCTGATCACGCTCGACCAGGCGGGCGACGGCTCGCCGCTGGAGCCGGCCCGGCGGGTCGCGGGCGAGGTGT TCGGCCCCGTCGAGGTGGCGGCCGCGACCGCGGTCCGGCCGTTCACGGCCGTGCCCGAGTGGTTCCGCTCGCGCGACTCG ATGCGTGACGACCTGATCGCGCTGCAGGCCGAGAACTCCCGGCTCAGGTCGGACCTCGCGACCCAGGGCTACGACCGCAA CCGCCTCGAGGAGTACGACGGCCTCACCGCGGCTGCTCGCAGCCTCGGCTACTCCCTCGTGCCGGCGCGCGTCGTCGGTC TCGGGTCGTCGCAGTCCTTCTCCAGCACGGTGACCATCGACGCCGGCTCGGACGCCGGCCTGCAGCCGGACCTCACGGTG ATCAACAACGACGGCCTGGTCGGCCGGGTGCTGCGGGTCACCCGCACCACCGCGACCGTGCTGCTCATCGTCGACGCCGC CTCGGTCGTCGGCGGCCGGGTCGGGGAGAGCATGGAGGTCGGCTTCCTGCACGGCCGTGGCGTCCTCGGCGACCACGGCC GGCTCGACCTGGAGCTGGTCGACCAGACGGCCGTCCCGGCCAAGCACGACGCGGTGGTGACCTGGGGCAGCGAGGCCGGC GGCCCCTACGTCTCCGGCGTGCCCGTCGGGCGGGTGACCGCCGTCTACAGCAGCCTGCGGGAGACCTCGCAGCGCGCCGT GATCGACCCGTTCGTCGACTTCGGCGCCCTGGACCTGGTCGGCGTCGTGGTGCCGTCCGGCACGACCAGCGACCGCGCGA TCATCGAGTCCGACGGGAGCCTGCGGTGA
Upstream 100 bases:
>100_bases CCGAGGATCCGCTCTGCTCGGTCGCGCTCGGCGCCGGCAAGTGCGTCGAGGAGTTCGAGGCCCTCCAGCAGGTGCTGGTC AGCGACCAGAGGCGCCACTG
Downstream 100 bases:
>100_bases CCGCCCTACGGGCCGCCGCGGCCGCCGCTGCGGTAGCGGTCGCGCTGGTGCTCCAGGTCTCGGTCTTCCCGCACCTCGCG TGGGACGGCATCGTCCCGAA
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein-Like Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSRERRWRSPGEPPPSSSALLVALVLACLSLITLDQAGDGSPLEPARRVAGEVFGPVEVAAATAVRPFTAVPEWFRSRDS MRDDLIALQAENSRLRSDLATQGYDRNRLEEYDGLTAAARSLGYSLVPARVVGLGSSQSFSSTVTIDAGSDAGLQPDLTV INNDGLVGRVLRVTRTTATVLLIVDAASVVGGRVGESMEVGFLHGRGVLGDHGRLDLELVDQTAVPAKHDAVVTWGSEAG GPYVSGVPVGRVTAVYSSLRETSQRAVIDPFVDFGALDLVGVVVPSGTTSDRAIIESDGSLR
Sequences:
>Translated_302_residues MSRERRWRSPGEPPPSSSALLVALVLACLSLITLDQAGDGSPLEPARRVAGEVFGPVEVAAATAVRPFTAVPEWFRSRDS MRDDLIALQAENSRLRSDLATQGYDRNRLEEYDGLTAAARSLGYSLVPARVVGLGSSQSFSSTVTIDAGSDAGLQPDLTV INNDGLVGRVLRVTRTTATVLLIVDAASVVGGRVGESMEVGFLHGRGVLGDHGRLDLELVDQTAVPAKHDAVVTWGSEAG GPYVSGVPVGRVTAVYSSLRETSQRAVIDPFVDFGALDLVGVVVPSGTTSDRAIIESDGSLR >Mature_301_residues SRERRWRSPGEPPPSSSALLVALVLACLSLITLDQAGDGSPLEPARRVAGEVFGPVEVAAATAVRPFTAVPEWFRSRDSM RDDLIALQAENSRLRSDLATQGYDRNRLEEYDGLTAAARSLGYSLVPARVVGLGSSQSFSSTVTIDAGSDAGLQPDLTVI NNDGLVGRVLRVTRTTATVLLIVDAASVVGGRVGESMEVGFLHGRGVLGDHGRLDLELVDQTAVPAKHDAVVTWGSEAGG PYVSGVPVGRVTAVYSSLRETSQRAVIDPFVDFGALDLVGVVVPSGTTSDRAIIESDGSLR
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31750; Mature: 31619
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRERRWRSPGEPPPSSSALLVALVLACLSLITLDQAGDGSPLEPARRVAGEVFGPVEVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHH AATAVRPFTAVPEWFRSRDSMRDDLIALQAENSRLRSDLATQGYDRNRLEEYDGLTAAAR HHHHCCCHHHHHHHHHHHHCHHHHEEEEECCCHHHHHHHHHCCCCHHHHHHHCCHHHHHH SLGYSLVPARVVGLGSSQSFSSTVTIDAGSDAGLQPDLTVINNDGLVGRVLRVTRTTATV HCCCCCCCHHEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHEEE LLIVDAASVVGGRVGESMEVGFLHGRGVLGDHGRLDLELVDQTAVPAKHDAVVTWGSEAG EEEEEHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCC GPYVSGVPVGRVTAVYSSLRETSQRAVIDPFVDFGALDLVGVVVPSGTTSDRAIIESDGS CCEECCCCHHHHHHHHHHHHHHHHHHEHHHHHCCCHHHEEEEEECCCCCCCCEEECCCCC LR CC >Mature Secondary Structure SRERRWRSPGEPPPSSSALLVALVLACLSLITLDQAGDGSPLEPARRVAGEVFGPVEVA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHH AATAVRPFTAVPEWFRSRDSMRDDLIALQAENSRLRSDLATQGYDRNRLEEYDGLTAAAR HHHHCCCHHHHHHHHHHHHCHHHHEEEEECCCHHHHHHHHHCCCCHHHHHHHCCHHHHHH SLGYSLVPARVVGLGSSQSFSSTVTIDAGSDAGLQPDLTVINNDGLVGRVLRVTRTTATV HCCCCCCCHHEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHEEE LLIVDAASVVGGRVGESMEVGFLHGRGVLGDHGRLDLELVDQTAVPAKHDAVVTWGSEAG EEEEEHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCC GPYVSGVPVGRVTAVYSSLRETSQRAVIDPFVDFGALDLVGVVVPSGTTSDRAIIESDGS CCEECCCCHHHHHHHHHHHHHHHHHHEHHHHHCCCHHHEEEEEECCCCCCCCEEECCCCC LR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA