| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717653
Identifier: 119717653
GI number: 119717653
Start: 3635258
End: 3636382
Strand: Reverse
Name: 119717653
Synonym: Noca_3431
Alternate gene names: NA
Gene position: 3636382-3635258 (Counterclockwise)
Preceding gene: 119717654
Following gene: 119717652
Centisome position: 72.93
GC content: 76.27
Gene sequence:
>1125_bases GTGAGCCCGAACGTGCGCCGGCACCGCGACCTGCACCCCGTGGCCTGGTGGCTGTGGGCGATCGGGCTCGCGGTGTCGGC GTCGTTCACGACCAACCCGCTGGTCCTGCTGCTGCTCGTGGGCGTCGCGGCGACGGCGGTGTCGCTGCGACGCTCCGACC AGCCGTGGGCGCGCTCGTTCGTCCTCTACGTCTGGCTGGGCGTCGCGATCGTGGTGATCCGGGTGGCCTTCCGGGTGGTC TTCGGCGGCTGGGCCGGCGGTCCGGTGCTGCTCGACCTGCCCGAGATCCCGCTGCCCGACTGGGTCGCCGGCATCACCTT GCTGGGGCCGGTGCACGCCCAGGCGCTGCTCGCCGCGGCGTACGACGGGCTGCGGCTGGCCACCATTGTGATCTGCGTCG GCGCCGCGAACTCCCTGGCCAACCCCAAGCGGCTGCTCCGCTCGGTGCCACCGGCTCTCTACGAGATCGGCACCGCGCTC GTGGTCGCGGTCAGCGTGCTGCCCCAGTTTGCCGACAGCGTCCGCCGGGTGCGCGCCGCGCAGCGCCTGCGCGAGGGCGA GACCGCGCGGATCGGCCGGCTCCGACGGTTCCTGGTGCCCGTGCTCGAGGACGCCCTCGAGCGCTCGCTCGCCCTCGCCG CGGGCATGGACACCCGTGGCTACGGCCGGGCCACCAGCCTCACCCGCGCCCAACGACGTACGACGGGAGCGCTCATGCTG ACCGGCCTCGGCGGCATCTGCGTGGGCACCTACGCGGTGCTCGACACCACCGCCCCCCGCTACCTGGCGCTGCCGATGCT GGCGCTCGGGACGCTCACGGCGGGCGCGGGGCTGCTCAGCGCCGGCCGACGGGTGGAGCGCACCCGCTACCGCCCGGACC ACTGGCGCTGGCCCGAGCTGGCGGTCGCGGCGTCGGGCGTGGTCGTCGGTGCCGCCGGGTGGTGGTTCGACCACCACCAG CCCGCGGTCGCCTACCCCGCCCTGGACGCGGTCCCGCCGGTGAGCGCGACGGCGCTGCTGGCTGCGGTCCTCGCGCTCGG GGGCGCGCTCTGCTCGCCACCGCCCGCCCGGCCGGTCGCCGGCACGCCGGCGCGCCGGGACGAGCCGCAGGGGGTGGCCG CGTGA
Upstream 100 bases:
>100_bases GCGGGCTGCCCGCCTGGGTCGCCCCGGCGGTGATCGCGCTGCTCTTCGGTGCGGCTGGGGGCACGACGCTGGTCCGCCGA CGCAGGGGAGCCCGGCGGCC
Downstream 100 bases:
>100_bases TCGAGCTACGCGACATCGGCTTCGCCTACGGCGACGGCCCGCCGGTGCTCGCGGACGTGGACCTGGTCATCGACGAGGGG GAGCTGGTCCTCGTCTCCGG
Product: cobalt transport protein
Products: NA
Alternate protein names: ABC Transporter-Associated Permease; Cobalt Transporter; Cobalt ABC Transporter Permease CbiQ; Permease Component Of ABC-Type Cobalt Transport System
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSPNVRRHRDLHPVAWWLWAIGLAVSASFTTNPLVLLLLVGVAATAVSLRRSDQPWARSFVLYVWLGVAIVVIRVAFRVV FGGWAGGPVLLDLPEIPLPDWVAGITLLGPVHAQALLAAAYDGLRLATIVICVGAANSLANPKRLLRSVPPALYEIGTAL VVAVSVLPQFADSVRRVRAAQRLREGETARIGRLRRFLVPVLEDALERSLALAAGMDTRGYGRATSLTRAQRRTTGALML TGLGGICVGTYAVLDTTAPRYLALPMLALGTLTAGAGLLSAGRRVERTRYRPDHWRWPELAVAASGVVVGAAGWWFDHHQ PAVAYPALDAVPPVSATALLAAVLALGGALCSPPPARPVAGTPARRDEPQGVAA
Sequences:
>Translated_374_residues MSPNVRRHRDLHPVAWWLWAIGLAVSASFTTNPLVLLLLVGVAATAVSLRRSDQPWARSFVLYVWLGVAIVVIRVAFRVV FGGWAGGPVLLDLPEIPLPDWVAGITLLGPVHAQALLAAAYDGLRLATIVICVGAANSLANPKRLLRSVPPALYEIGTAL VVAVSVLPQFADSVRRVRAAQRLREGETARIGRLRRFLVPVLEDALERSLALAAGMDTRGYGRATSLTRAQRRTTGALML TGLGGICVGTYAVLDTTAPRYLALPMLALGTLTAGAGLLSAGRRVERTRYRPDHWRWPELAVAASGVVVGAAGWWFDHHQ PAVAYPALDAVPPVSATALLAAVLALGGALCSPPPARPVAGTPARRDEPQGVAA >Mature_373_residues SPNVRRHRDLHPVAWWLWAIGLAVSASFTTNPLVLLLLVGVAATAVSLRRSDQPWARSFVLYVWLGVAIVVIRVAFRVVF GGWAGGPVLLDLPEIPLPDWVAGITLLGPVHAQALLAAAYDGLRLATIVICVGAANSLANPKRLLRSVPPALYEIGTALV VAVSVLPQFADSVRRVRAAQRLREGETARIGRLRRFLVPVLEDALERSLALAAGMDTRGYGRATSLTRAQRRTTGALMLT GLGGICVGTYAVLDTTAPRYLALPMLALGTLTAGAGLLSAGRRVERTRYRPDHWRWPELAVAASGVVVGAAGWWFDHHQP AVAYPALDAVPPVSATALLAAVLALGGALCSPPPARPVAGTPARRDEPQGVAA
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39640; Mature: 39509
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNVRRHRDLHPVAWWLWAIGLAVSASFTTNPLVLLLLVGVAATAVSLRRSDQPWARSF CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH VLYVWLGVAIVVIRVAFRVVFGGWAGGPVLLDLPEIPLPDWVAGITLLGPVHAQALLAAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH YDGLRLATIVICVGAANSLANPKRLLRSVPPALYEIGTALVVAVSVLPQFADSVRRVRAA HCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLREGETARIGRLRRFLVPVLEDALERSLALAAGMDTRGYGRATSLTRAQRRTTGALML HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHEE TGLGGICVGTYAVLDTTAPRYLALPMLALGTLTAGAGLLSAGRRVERTRYRPDHWRWPEL CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHH AVAASGVVVGAAGWWFDHHQPAVAYPALDAVPPVSATALLAAVLALGGALCSPPPARPVA HHHHCCEEEECCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC GTPARRDEPQGVAA CCCCCCCCCCCCCC >Mature Secondary Structure SPNVRRHRDLHPVAWWLWAIGLAVSASFTTNPLVLLLLVGVAATAVSLRRSDQPWARSF CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH VLYVWLGVAIVVIRVAFRVVFGGWAGGPVLLDLPEIPLPDWVAGITLLGPVHAQALLAAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH YDGLRLATIVICVGAANSLANPKRLLRSVPPALYEIGTALVVAVSVLPQFADSVRRVRAA HCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLREGETARIGRLRRFLVPVLEDALERSLALAAGMDTRGYGRATSLTRAQRRTTGALML HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHEE TGLGGICVGTYAVLDTTAPRYLALPMLALGTLTAGAGLLSAGRRVERTRYRPDHWRWPEL CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHH AVAASGVVVGAAGWWFDHHQPAVAYPALDAVPPVSATALLAAVLALGGALCSPPPARPVA HHHHCCEEEECCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC GTPARRDEPQGVAA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA