Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is bluB [H]

Identifier: 119717629

GI number: 119717629

Start: 3609492

End: 3610160

Strand: Reverse

Name: bluB [H]

Synonym: Noca_3407

Alternate gene names: 119717629

Gene position: 3610160-3609492 (Counterclockwise)

Preceding gene: 119717630

Following gene: 119717628

Centisome position: 72.41

GC content: 68.76

Gene sequence:

>669_bases
ATGGAGTTCTACGACGTCATCAACCGTCGTCGTGACACTCGCCGAGAGTTCACAGGTGAGCCGTTGGCCGCCGAGGTGCT
GGAGCGGCTGTTGTCGGCGGCTCACTGTGCCCCGAGTGTCGGGATGAGCCAACCGTGGGATTTCGTCCTGGTCCGCTCGC
CGGACACGCTCAGCGCGTTCGCCGACCACGTCGCGCACGAGCGGGACACGTTCGCGGCGACGCTCAGCGGCGAGCGCGCC
GAGACGTTCTCGCGGATCAAGGTCGAAGGGATCCGCGACTCGCGGCTCGGGATCGTGGTCGGCTACGACCCGACTCGCGG
CGGGCCGAGGGTGCTCGGTCGGCATGCCATCGCCGACGCCGGGCTCTACTCGGTGGTCTGCGCCATCCAGAACCTCTGGC
TCGCCGCGACCGCCGAGGGCCTCGGGGTGGGGTGGGTCAGTTTCTACCGCGAGGAGTTCTTGCGCGATCTCGTCGGCATG
CCGGAGCACGTACGGCCGGTAGCCTGGCTCTGCGTCGGCACCGTCTCGGAGCTACCGGACGTTCCTGACCTGGAGCGCTA
CGGCTGGCGGCACCGCTCGCCGTTGGCGAGTGCCCTGCATGAGGAGAGGTACGGCGTCAGCGCGTCAATGCCCACTGTGT
GGCGGTACGTGCCGGAGTCCACCCGGTGA

Upstream 100 bases:

>100_bases
TCCTGGTCGGCTGGGCACTGGCCGGCGAGGGCGGCGAGTCCTATCTCTACGACGCGGCCCGCGACCGGACCTCGAAGCGA
CGCGACGATCGGGGGCTGTG

Downstream 100 bases:

>100_bases
AGGCGCCGACTGGTGCGCTGGTCTCGACCGAGACTCGGGTCAGCTCGCCGCCGTGCTCCCGGTACAGCTGCCCGAGCAGC
ATCTCGGTCTCGAGCGTCAC

Product: cob(II)yrinic acid a,c-diamide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MEFYDVINRRRDTRREFTGEPLAAEVLERLLSAAHCAPSVGMSQPWDFVLVRSPDTLSAFADHVAHERDTFAATLSGERA
ETFSRIKVEGIRDSRLGIVVGYDPTRGGPRVLGRHAIADAGLYSVVCAIQNLWLAATAEGLGVGWVSFYREEFLRDLVGM
PEHVRPVAWLCVGTVSELPDVPDLERYGWRHRSPLASALHEERYGVSASMPTVWRYVPESTR

Sequences:

>Translated_222_residues
MEFYDVINRRRDTRREFTGEPLAAEVLERLLSAAHCAPSVGMSQPWDFVLVRSPDTLSAFADHVAHERDTFAATLSGERA
ETFSRIKVEGIRDSRLGIVVGYDPTRGGPRVLGRHAIADAGLYSVVCAIQNLWLAATAEGLGVGWVSFYREEFLRDLVGM
PEHVRPVAWLCVGTVSELPDVPDLERYGWRHRSPLASALHEERYGVSASMPTVWRYVPESTR
>Mature_222_residues
MEFYDVINRRRDTRREFTGEPLAAEVLERLLSAAHCAPSVGMSQPWDFVLVRSPDTLSAFADHVAHERDTFAATLSGERA
ETFSRIKVEGIRDSRLGIVVGYDPTRGGPRVLGRHAIADAGLYSVVCAIQNLWLAATAEGLGVGWVSFYREEFLRDLVGM
PEHVRPVAWLCVGTVSELPDVPDLERYGWRHRSPLASALHEERYGVSASMPTVWRYVPESTR

Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012825
- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: =1.16.8.1 [H]

Molecular weight: Translated: 24839; Mature: 24839

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00134 TRYPSIN_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFYDVINRRRDTRREFTGEPLAAEVLERLLSAAHCAPSVGMSQPWDFVLVRSPDTLSAF
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHH
ADHVAHERDTFAATLSGERAETFSRIKVEGIRDSRLGIVVGYDPTRGGPRVLGRHAIADA
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
GLYSVVCAIQNLWLAATAEGLGVGWVSFYREEFLRDLVGMPEHVRPVAWLCVGTVSELPD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
VPDLERYGWRHRSPLASALHEERYGVSASMPTVWRYVPESTR
CCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MEFYDVINRRRDTRREFTGEPLAAEVLERLLSAAHCAPSVGMSQPWDFVLVRSPDTLSAF
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHH
ADHVAHERDTFAATLSGERAETFSRIKVEGIRDSRLGIVVGYDPTRGGPRVLGRHAIADA
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
GLYSVVCAIQNLWLAATAEGLGVGWVSFYREEFLRDLVGMPEHVRPVAWLCVGTVSELPD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
VPDLERYGWRHRSPLASALHEERYGVSASMPTVWRYVPESTR
CCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635831; 9256491 [H]