| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ywbO [H]
Identifier: 119717612
GI number: 119717612
Start: 3592731
End: 3593438
Strand: Reverse
Name: ywbO [H]
Synonym: Noca_3389
Alternate gene names: 119717612
Gene position: 3593438-3592731 (Counterclockwise)
Preceding gene: 119717613
Following gene: 119717611
Centisome position: 72.07
GC content: 72.6
Gene sequence:
>708_bases ATGCGCATCGAGATCTGGAGTGACGTCGTCTGTCCGTGGTGCTACGTCGGGAAGCGGCGGCTGGAGACCGCCCTGGCCGG CTTCGAGCACGCCGATCAGGTGGAGGTCGTCTACCGGTCCTTCGAGCTCGACCCGAGCGCCCCGGCCCACGGGCAGGAGC TGAGCACCCCGGTCATCGCCCGCAAGTACGGCCGCAGCGAGGCCGAGATGCGCCAGATGCAGCAGCAGCTGGTCGACCTG GCCGCCGAGGAGGGCCTGGCGTTCAGGATCTTCGAGACCGTGCACACCAACACCGTCGACGCCCACCGCGTCCTGCACCT CGCCCTCGAGACCGGGGGCGCGGCGCTCCAGCGGGAGCTGAAGGAGGCGCTGCTCGCGGCGTACTTCCTCGACGCGCGCA ACGTCGGCGACCACGACGTGCTCACCGAGGTGGCCGACGCGGCCGGGCTGGAGGAGGCCCGGGTGCGCGAGGTGCTCGCC GGGACCGAGTACGCCGACGCGGTCGAGGCCGACATCGCCCAGGCCCGGGCGTACGGCGCGACCGGCGTGCCGTTCTTCGT CGTGGACCAGAAGTACGGCGTCTCCGGCGCCCAGCCGGCCGGGGTGTTCAGCCAGGTCCTCGAGCAGGCCTGGACCGAGT CCCACCCGGTGCTCCAGACCGTCGGCGGCGACGCCGAGGCGTGCGGCCCGGACGGCTGCGCCATCTGA
Upstream 100 bases:
>100_bases AGTCGCACGACTCCGACTACACCGAGGGCACCGCCACCCGCTGAACCACCCGTGACGAGGCCGGCGGAATGCGCCGGCCT CGTTGCGCGTTCAACCAGAT
Downstream 100 bases:
>100_bases GCCTGCGAGATGAGGTTAGGCAAACCTAAGTCCGAGGCGTATGCTCGGGCTTCGTGTTCGCGAACTACCTGATCGGTCTC CGTGAGGGCCTCGAGGCGGC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIARKYGRSEAEMRQMQQQLVDL AAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQRELKEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLA GTEYADAVEADIAQARAYGATGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI
Sequences:
>Translated_235_residues MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIARKYGRSEAEMRQMQQQLVDL AAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQRELKEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLA GTEYADAVEADIAQARAYGATGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI >Mature_235_residues MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIARKYGRSEAEMRQMQQQLVDL AAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQRELKEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLA GTEYADAVEADIAQARAYGATGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 25486; Mature: 25486
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIA CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH RKYGRSEAEMRQMQQQLVDLAAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQREL HHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH KEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLAGTEYADAVEADIAQARAYGA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC TGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIA CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH RKYGRSEAEMRQMQQQLVDLAAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQREL HHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH KEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLAGTEYADAVEADIAQARAYGA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC TGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]