Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is ywbO [H]

Identifier: 119717612

GI number: 119717612

Start: 3592731

End: 3593438

Strand: Reverse

Name: ywbO [H]

Synonym: Noca_3389

Alternate gene names: 119717612

Gene position: 3593438-3592731 (Counterclockwise)

Preceding gene: 119717613

Following gene: 119717611

Centisome position: 72.07

GC content: 72.6

Gene sequence:

>708_bases
ATGCGCATCGAGATCTGGAGTGACGTCGTCTGTCCGTGGTGCTACGTCGGGAAGCGGCGGCTGGAGACCGCCCTGGCCGG
CTTCGAGCACGCCGATCAGGTGGAGGTCGTCTACCGGTCCTTCGAGCTCGACCCGAGCGCCCCGGCCCACGGGCAGGAGC
TGAGCACCCCGGTCATCGCCCGCAAGTACGGCCGCAGCGAGGCCGAGATGCGCCAGATGCAGCAGCAGCTGGTCGACCTG
GCCGCCGAGGAGGGCCTGGCGTTCAGGATCTTCGAGACCGTGCACACCAACACCGTCGACGCCCACCGCGTCCTGCACCT
CGCCCTCGAGACCGGGGGCGCGGCGCTCCAGCGGGAGCTGAAGGAGGCGCTGCTCGCGGCGTACTTCCTCGACGCGCGCA
ACGTCGGCGACCACGACGTGCTCACCGAGGTGGCCGACGCGGCCGGGCTGGAGGAGGCCCGGGTGCGCGAGGTGCTCGCC
GGGACCGAGTACGCCGACGCGGTCGAGGCCGACATCGCCCAGGCCCGGGCGTACGGCGCGACCGGCGTGCCGTTCTTCGT
CGTGGACCAGAAGTACGGCGTCTCCGGCGCCCAGCCGGCCGGGGTGTTCAGCCAGGTCCTCGAGCAGGCCTGGACCGAGT
CCCACCCGGTGCTCCAGACCGTCGGCGGCGACGCCGAGGCGTGCGGCCCGGACGGCTGCGCCATCTGA

Upstream 100 bases:

>100_bases
AGTCGCACGACTCCGACTACACCGAGGGCACCGCCACCCGCTGAACCACCCGTGACGAGGCCGGCGGAATGCGCCGGCCT
CGTTGCGCGTTCAACCAGAT

Downstream 100 bases:

>100_bases
GCCTGCGAGATGAGGTTAGGCAAACCTAAGTCCGAGGCGTATGCTCGGGCTTCGTGTTCGCGAACTACCTGATCGGTCTC
CGTGAGGGCCTCGAGGCGGC

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIARKYGRSEAEMRQMQQQLVDL
AAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQRELKEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLA
GTEYADAVEADIAQARAYGATGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI

Sequences:

>Translated_235_residues
MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIARKYGRSEAEMRQMQQQLVDL
AAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQRELKEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLA
GTEYADAVEADIAQARAYGATGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI
>Mature_235_residues
MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIARKYGRSEAEMRQMQQQLVDL
AAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQRELKEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLA
GTEYADAVEADIAQARAYGATGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 25486; Mature: 25486

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIA
CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RKYGRSEAEMRQMQQQLVDLAAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQREL
HHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
KEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLAGTEYADAVEADIAQARAYGA
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
TGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIEIWSDVVCPWCYVGKRRLETALAGFEHADQVEVVYRSFELDPSAPAHGQELSTPVIA
CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RKYGRSEAEMRQMQQQLVDLAAEEGLAFRIFETVHTNTVDAHRVLHLALETGGAALQREL
HHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
KEALLAAYFLDARNVGDHDVLTEVADAAGLEEARVREVLAGTEYADAVEADIAQARAYGA
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
TGVPFFVVDQKYGVSGAQPAGVFSQVLEQAWTESHPVLQTVGGDAEACGPDGCAI
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]