| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ucpA [C]
Identifier: 119717580
GI number: 119717580
Start: 3556711
End: 3557367
Strand: Reverse
Name: ucpA [C]
Synonym: Noca_3356
Alternate gene names: 119717580
Gene position: 3557367-3556711 (Counterclockwise)
Preceding gene: 119717581
Following gene: 119717576
Centisome position: 71.35
GC content: 74.89
Gene sequence:
>657_bases ATGAGCAGACCGGTGATCGTGGTGGTGGGTGCAGGCCCGGGCGTGAGTGGGTCGGTGGCGCGCGCGTTCGCCCGGGACGG GTACGACGCCGGCCTCCTCGGCATCGACGAGGAGCAGCTGCAGCGGCTCGCCGACGAGCTCGAGGAGCTCGGCGCCACCG TCGGCCACGCGGTCGTCGACATCACCGACGCCGAGGCCGCCGGCGCCGCGATCCGGCGGATCGGCGAGCACACGGGGCGG ATCGACGTGCTGCACTTCAACCCCAGCGCGTTCCGGGAGAAGGACCCGCTGGAGCTGACCGTCCCCGAGCTGCTCGAGGA CGTCACGCTCGGGGTCGGCGCGCTCCTGGTCGCGGTCCAGGCGGCCCGACCGTTCCTGTCCGCCGGCGGCCGCGTCACCG CCACCGGCAGCATGGCCGCCGACAAGCCGTGGCACCGGGCCGCCTCGCTCGGCGTGCAGAAGGCCGGCCTGCGCAACCTC GTGCACAGCCTCGACGCCACCCTGGCACCCGACGGCATCCGCGCGGTCTCGGTCACGGTGCGCGGCACGCTGGCGAAGGA GGGCCCGTTCACGCCCGACCGGGTCGCCGAGGCGATCCTCGCCGCCGCCCGCCAGGACGAGGACGGGTGGCGCTCCGAGA TCCCCTACTCCGGGTGA
Upstream 100 bases:
>100_bases GTCGATCTACGTCCTACCCGGGGCGAGCGGCGTCGACCTGGACGGCCCGATCACGTGCGACTGGCGCGACGGCGACGTGT GGTGAGCCTAGGGTGAGCCC
Downstream 100 bases:
>100_bases CCTACGAGATCTCGGCCAGGCTCTTCCCGATGGCCGGGCGCAGCGAGTCGCTGGCGTCCCAGTCGTTGGCCTGCATCGCC GCGACGACCTTGCCGCCCGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSRPVIVVVGAGPGVSGSVARAFARDGYDAGLLGIDEEQLQRLADELEELGATVGHAVVDITDAEAAGAAIRRIGEHTGR IDVLHFNPSAFREKDPLELTVPELLEDVTLGVGALLVAVQAARPFLSAGGRVTATGSMAADKPWHRAASLGVQKAGLRNL VHSLDATLAPDGIRAVSVTVRGTLAKEGPFTPDRVAEAILAAARQDEDGWRSEIPYSG
Sequences:
>Translated_218_residues MSRPVIVVVGAGPGVSGSVARAFARDGYDAGLLGIDEEQLQRLADELEELGATVGHAVVDITDAEAAGAAIRRIGEHTGR IDVLHFNPSAFREKDPLELTVPELLEDVTLGVGALLVAVQAARPFLSAGGRVTATGSMAADKPWHRAASLGVQKAGLRNL VHSLDATLAPDGIRAVSVTVRGTLAKEGPFTPDRVAEAILAAARQDEDGWRSEIPYSG >Mature_217_residues SRPVIVVVGAGPGVSGSVARAFARDGYDAGLLGIDEEQLQRLADELEELGATVGHAVVDITDAEAAGAAIRRIGEHTGRI DVLHFNPSAFREKDPLELTVPELLEDVTLGVGALLVAVQAARPFLSAGGRVTATGSMAADKPWHRAASLGVQKAGLRNLV HSLDATLAPDGIRAVSVTVRGTLAKEGPFTPDRVAEAILAAARQDEDGWRSEIPYSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082100, Length=179, Percent_Identity=31.8435754189944, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 22714; Mature: 22583
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPVIVVVGAGPGVSGSVARAFARDGYDAGLLGIDEEQLQRLADELEELGATVGHAVVD CCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE ITDAEAAGAAIRRIGEHTGRIDVLHFNPSAFREKDPLELTVPELLEDVTLGVGALLVAVQ ECCCHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH AARPFLSAGGRVTATGSMAADKPWHRAASLGVQKAGLRNLVHSLDATLAPDGIRAVSVTV HHHHHHHCCCEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE RGTLAKEGPFTPDRVAEAILAAARQDEDGWRSEIPYSG EEEECCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure SRPVIVVVGAGPGVSGSVARAFARDGYDAGLLGIDEEQLQRLADELEELGATVGHAVVD CCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE ITDAEAAGAAIRRIGEHTGRIDVLHFNPSAFREKDPLELTVPELLEDVTLGVGALLVAVQ ECCCHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH AARPFLSAGGRVTATGSMAADKPWHRAASLGVQKAGLRNLVHSLDATLAPDGIRAVSVTV HHHHHHHCCCEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE RGTLAKEGPFTPDRVAEAILAAARQDEDGWRSEIPYSG EEEECCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA