| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717554
Identifier: 119717554
GI number: 119717554
Start: 3535618
End: 3537567
Strand: Reverse
Name: 119717554
Synonym: Noca_3330
Alternate gene names: NA
Gene position: 3537567-3535618 (Counterclockwise)
Preceding gene: 119717559
Following gene: 119717548
Centisome position: 70.95
GC content: 69.54
Gene sequence:
>1950_bases GTGCCGCCAACCCTCGAGCCGCAGCCCGGCGGCGGTGAGCTCCTGGGCGATCCGGTCGGTCGAGCCGGAGCCGGCGTATC AGACGAGCCGCCGAGGCGCTCCTCCAAGTCGCCACGGCTCACCGCGGGCCTGGCTTGTCTCGAGGAGCACACGATGTCCC ACCTGTTCACGGGCCGGCTGATCGGCCTTCTCTGCGACGACTGTTCCGAACCGCTGGTCGGGGCGACCGTCCGCCTGGTT CGTAGCACGAGCATCACGATCAGCAGCGATGCTGCTGCCGATCCGAAGCACACCGCGATCGTGCTCGAGGCCTCGGTGGC TGATACTCGGGCCGATGACTTCCTCGGCGAGGCGGTGATCGGCGAGGACGGCCTCTTCCGGGTCGAGCTCGCCGAGCGGT ACGACGGCGAGGCGTTCGACGTCGACATCTTCTGCGGCACCATGACCGGCCACAAGGTGCCGCCCAAGCCGCTGTCGTTC ACGTTGACCACACTGGCTCCGCAGTGGCGGCCGGTCGAGGACGGCTTCGTGGCGGCCTGGTCCTACGACATCCCGCACCG GATCTGGTGCGGCCTCCGGGGGCGGCTCGGCTGGTGGTCGATCTGCGGGCACGTGCGCGTGTGTGACTCCGCGATCGCGG TGCCCGGCGTGAAGGTCAGCGCGTTCGACGTCGACTGGCTCCAGGACGACCCGCTGGGCAGCGCGGTCACCGACACGAGC GGCCACTTCCGCATCGACTACACCGCCGACGCGTTCCGGCGGACACCATGGTCGCCGTCCATCAACATCGAGCTGGTCGC GGGGCCGGATGTGTACTTCTGGGTCGACGGACCCACCGGCGTACTCCTCCACGAGCCGCGCTCGCGTGGCCGCCAGCCCG ATCGGGAGAACGTCGGACCGTGCTTCTGCGTCGATCTGTGCGTCGAGGACGTGCCGCCAGGCACCGACCAGCCCTACCCC TGGTTCGACCACATCGGCAGCTACAAGACTCTCACCGGATTCGACAGCGCGCCTGGTGGCACCGGCCACACGCTCGGCGA CGACCGGGCGTTCTACGCGGGCCTGCGGCTCAACGGGGTCCTCGGACGGCTCTTCAGCGGTCAGCCGGCGGAGTACCGCT TCGAGTTCGACGCCGGGGCTGGCTGGCAGCCCGTACGCCCGGCCCTCATGAACGCGATGCAGATCGGTACGTGGCAGCGC CTGACCGGGTCCTTCCCGCCGGTGGAGACCAAGAGGGTGGTGGTGTTGGGTGCGAACGGGCCCGACGAGGTCGCGGTGGC TCCGGACGCGGACGGCTGGATCGCCGTACCGCAGGACAACAGCTTGACCACCGGCCTCTTCGTGCCGAACAACAACCTGC TCGGCCTCGACAGCGCGAGCATCTCGGCGCAGACCCACGACCTGGCCGGCATCGTGGCCGGGCAGAGCACCGCTCCCGCC GGCCTCGCAGCCGACGAGTACGTGGCTCTGCGGATGGTGGTGCGCGTCGCCGGCCAGCCGGCCACCCAGGTGCAGGCCGG GATCGCCGAACGGGTCGCGCTGGCCAACACGACCTACGACCAGGTGCAGAAGCACGGGTCGTGGGTGCCCACGCGGGTCG ACGGCCAGCTCGGGGTGATCAGTCTGGACGTCCAGGAGCTCATCGGCCACGGCTGCGCGCGGATCACCAACGCGCTCAAC GTGAACTACACCGCCGCGCACCCCGACCTGGGGAGCATGTCGTTGACCGTCACGGGGCCGGGCGGGCCGTACCACTATCC CCTCCCGCCGATCGCCCAGGACTTCTTCGGCACCGTCAACACCCTGCTCGACAGTGCCGACAACCCGGTCACGATCGCGT CGCTGCCCAAGTGCAGCTACCTGCTGCAGGGCTCGATCGACCTCCTGCTCACCACCGGAGACTCGGTGCCGCTGCCGATC ACCGACCAGATCGCCTTCACCACGCAGTGA
Upstream 100 bases:
>100_bases AGCTCACAACGACCAACGACGGTCAACCACGAATTGCCGCTTTGGCCTGCAGTTTCAGTGACTTCCGTAGCCCCAGCCGC TCCTGCTGGGGCTTTGTTGC
Downstream 100 bases:
>100_bases GTCGCCGTGAGCCGAGGCTGCCTGCCGTCAGGAGAACAGTCCGTCGGTGAGGGTCAGGTCCACTCCGTTCTGGAACACCC AGAAGAACGCGAGAGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MPPTLEPQPGGGELLGDPVGRAGAGVSDEPPRRSSKSPRLTAGLACLEEHTMSHLFTGRLIGLLCDDCSEPLVGATVRLV RSTSITISSDAAADPKHTAIVLEASVADTRADDFLGEAVIGEDGLFRVELAERYDGEAFDVDIFCGTMTGHKVPPKPLSF TLTTLAPQWRPVEDGFVAAWSYDIPHRIWCGLRGRLGWWSICGHVRVCDSAIAVPGVKVSAFDVDWLQDDPLGSAVTDTS GHFRIDYTADAFRRTPWSPSINIELVAGPDVYFWVDGPTGVLLHEPRSRGRQPDRENVGPCFCVDLCVEDVPPGTDQPYP WFDHIGSYKTLTGFDSAPGGTGHTLGDDRAFYAGLRLNGVLGRLFSGQPAEYRFEFDAGAGWQPVRPALMNAMQIGTWQR LTGSFPPVETKRVVVLGANGPDEVAVAPDADGWIAVPQDNSLTTGLFVPNNNLLGLDSASISAQTHDLAGIVAGQSTAPA GLAADEYVALRMVVRVAGQPATQVQAGIAERVALANTTYDQVQKHGSWVPTRVDGQLGVISLDVQELIGHGCARITNALN VNYTAAHPDLGSMSLTVTGPGGPYHYPLPPIAQDFFGTVNTLLDSADNPVTIASLPKCSYLLQGSIDLLLTTGDSVPLPI TDQIAFTTQ
Sequences:
>Translated_649_residues MPPTLEPQPGGGELLGDPVGRAGAGVSDEPPRRSSKSPRLTAGLACLEEHTMSHLFTGRLIGLLCDDCSEPLVGATVRLV RSTSITISSDAAADPKHTAIVLEASVADTRADDFLGEAVIGEDGLFRVELAERYDGEAFDVDIFCGTMTGHKVPPKPLSF TLTTLAPQWRPVEDGFVAAWSYDIPHRIWCGLRGRLGWWSICGHVRVCDSAIAVPGVKVSAFDVDWLQDDPLGSAVTDTS GHFRIDYTADAFRRTPWSPSINIELVAGPDVYFWVDGPTGVLLHEPRSRGRQPDRENVGPCFCVDLCVEDVPPGTDQPYP WFDHIGSYKTLTGFDSAPGGTGHTLGDDRAFYAGLRLNGVLGRLFSGQPAEYRFEFDAGAGWQPVRPALMNAMQIGTWQR LTGSFPPVETKRVVVLGANGPDEVAVAPDADGWIAVPQDNSLTTGLFVPNNNLLGLDSASISAQTHDLAGIVAGQSTAPA GLAADEYVALRMVVRVAGQPATQVQAGIAERVALANTTYDQVQKHGSWVPTRVDGQLGVISLDVQELIGHGCARITNALN VNYTAAHPDLGSMSLTVTGPGGPYHYPLPPIAQDFFGTVNTLLDSADNPVTIASLPKCSYLLQGSIDLLLTTGDSVPLPI TDQIAFTTQ >Mature_648_residues PPTLEPQPGGGELLGDPVGRAGAGVSDEPPRRSSKSPRLTAGLACLEEHTMSHLFTGRLIGLLCDDCSEPLVGATVRLVR STSITISSDAAADPKHTAIVLEASVADTRADDFLGEAVIGEDGLFRVELAERYDGEAFDVDIFCGTMTGHKVPPKPLSFT LTTLAPQWRPVEDGFVAAWSYDIPHRIWCGLRGRLGWWSICGHVRVCDSAIAVPGVKVSAFDVDWLQDDPLGSAVTDTSG HFRIDYTADAFRRTPWSPSINIELVAGPDVYFWVDGPTGVLLHEPRSRGRQPDRENVGPCFCVDLCVEDVPPGTDQPYPW FDHIGSYKTLTGFDSAPGGTGHTLGDDRAFYAGLRLNGVLGRLFSGQPAEYRFEFDAGAGWQPVRPALMNAMQIGTWQRL TGSFPPVETKRVVVLGANGPDEVAVAPDADGWIAVPQDNSLTTGLFVPNNNLLGLDSASISAQTHDLAGIVAGQSTAPAG LAADEYVALRMVVRVAGQPATQVQAGIAERVALANTTYDQVQKHGSWVPTRVDGQLGVISLDVQELIGHGCARITNALNV NYTAAHPDLGSMSLTVTGPGGPYHYPLPPIAQDFFGTVNTLLDSADNPVTIASLPKCSYLLQGSIDLLLTTGDSVPLPIT DQIAFTTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69179; Mature: 69048
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTLEPQPGGGELLGDPVGRAGAGVSDEPPRRSSKSPRLTAGLACLEEHTMSHLFTGRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IGLLCDDCSEPLVGATVRLVRSTSITISSDAAADPKHTAIVLEASVADTRADDFLGEAVI HHHHHHCCCCCHHHHEEEEEEECEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCEE GEDGLFRVELAERYDGEAFDVDIFCGTMTGHKVPPKPLSFTLTTLAPQWRPVEDGFVAAW CCCCEEEEEEHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE SYDIPHRIWCGLRGRLGWWSICGHVRVCDSAIAVPGVKVSAFDVDWLQDDPLGSAVTDTS ECCCCHHHHHCCCCCCCHHHHHCCEEEECCHHCCCCEEEEEEEECCCCCCCCCCCCCCCC GHFRIDYTADAFRRTPWSPSINIELVAGPDVYFWVDGPTGVLLHEPRSRGRQPDRENVGP CCEEEEEEHHHHHCCCCCCCEEEEEEECCCEEEEECCCCEEEEECHHHHCCCCCCCCCCC CFCVDLCVEDVPPGTDQPYPWFDHIGSYKTLTGFDSAPGGTGHTLGDDRAFYAGLRLNGV EEEEEHHHHCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEECHH LGRLFSGQPAEYRFEFDAGAGWQPVRPALMNAMQIGTWQRLTGSFPPVETKRVVVLGANG HHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCC PDEVAVAPDADGWIAVPQDNSLTTGLFVPNNNLLGLDSASISAQTHDLAGIVAGQSTAPA CCCEEECCCCCCEEEECCCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCCCC GLAADEYVALRMVVRVAGQPATQVQAGIAERVALANTTYDQVQKHGSWVPTRVDGQLGVI CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCEEEE SLDVQELIGHGCARITNALNVNYTAAHPDLGSMSLTVTGPGGPYHYPLPPIAQDFFGTVN EEEHHHHHCCCHHHHHHHEECCEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH TLLDSADNPVTIASLPKCSYLLQGSIDLLLTTGDSVPLPITDQIAFTTQ HHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEECC >Mature Secondary Structure PPTLEPQPGGGELLGDPVGRAGAGVSDEPPRRSSKSPRLTAGLACLEEHTMSHLFTGRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IGLLCDDCSEPLVGATVRLVRSTSITISSDAAADPKHTAIVLEASVADTRADDFLGEAVI HHHHHHCCCCCHHHHEEEEEEECEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCEE GEDGLFRVELAERYDGEAFDVDIFCGTMTGHKVPPKPLSFTLTTLAPQWRPVEDGFVAAW CCCCEEEEEEHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE SYDIPHRIWCGLRGRLGWWSICGHVRVCDSAIAVPGVKVSAFDVDWLQDDPLGSAVTDTS ECCCCHHHHHCCCCCCCHHHHHCCEEEECCHHCCCCEEEEEEEECCCCCCCCCCCCCCCC GHFRIDYTADAFRRTPWSPSINIELVAGPDVYFWVDGPTGVLLHEPRSRGRQPDRENVGP CCEEEEEEHHHHHCCCCCCCEEEEEEECCCEEEEECCCCEEEEECHHHHCCCCCCCCCCC CFCVDLCVEDVPPGTDQPYPWFDHIGSYKTLTGFDSAPGGTGHTLGDDRAFYAGLRLNGV EEEEEHHHHCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEECHH LGRLFSGQPAEYRFEFDAGAGWQPVRPALMNAMQIGTWQRLTGSFPPVETKRVVVLGANG HHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCC PDEVAVAPDADGWIAVPQDNSLTTGLFVPNNNLLGLDSASISAQTHDLAGIVAGQSTAPA CCCEEECCCCCCEEEECCCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCCCC GLAADEYVALRMVVRVAGQPATQVQAGIAERVALANTTYDQVQKHGSWVPTRVDGQLGVI CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCEEEE SLDVQELIGHGCARITNALNVNYTAAHPDLGSMSLTVTGPGGPYHYPLPPIAQDFFGTVN EEEHHHHHCCCHHHHHHHEECCEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH TLLDSADNPVTIASLPKCSYLLQGSIDLLLTTGDSVPLPITDQIAFTTQ HHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA