| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717547
Identifier: 119717547
GI number: 119717547
Start: 3531514
End: 3532533
Strand: Reverse
Name: 119717547
Synonym: Noca_3323
Alternate gene names: NA
Gene position: 3532533-3531514 (Counterclockwise)
Preceding gene: 119717548
Following gene: 119717546
Centisome position: 70.85
GC content: 71.96
Gene sequence:
>1020_bases GTGACCAACGATCCGCTGCGCTCGCAGCAGTGGGGTCTCGACCAGGTCCGGGCCGAGGCCGCCTGGGCAACGACGACCGG GTCCGGGGTCGTGGTCGCGGTCGTCGACTCCGGCGTCGACCTGAACCACCCTGACCTGCAGGGCCAGCTGGTCCCGGGCA TCACCACCGTCGGCTGCGGACCCAAGCAGAGCTACTGCGGTGACGGTAGTTGGGTCGGCATGGACGGTGCGGCCCAGCCC GCCGACAGCCACGGCACCCACGTCAGTGGCATCGTGGCCGCGGCCGCCGACAACGGCCTCGGGGTCGCGGGTGTCGCCCG GGACGCCAAGGTGATGCCGATCAAGGCGCTCGAGGACGGCAGCGGCTCCTTCGGAGACATCGCCAACGGGATCCGGTACG CCGTCGACCATGGCGCCAGCGTCGTCAACCTGAGCCTCGGTGCCGTCCCGGGTGGTCAGGCTCTCAGCCTCACCGGACTG GACACGGCCGTCACCGAGGCGATCGCCTACGCCGCCGCCCAGGGCGTGCTCGTGGTGGCCGCCGCAGGCAACGAGAGCTT CCCGGTCTGCGACACCCCGTCCTTCGAGGCCGGTGCCCTGTGCGTGACCTCGACGACTCGCGACGAGACGCCGGCGTGGT ACTCCAACGGGGCGATCAAGCCCGACGTCGACGCCGTGGCCGCGCCCGGTGGTGCCGGCCTGGTGGCCTGCGCGGACGAC ATCGTGTCCACGGTGCCCGTCGGCACCGGGTCGGCGGCCTGCGGCCAGCAGGACTACGACTACTACGCGGGCACCTCGAT GGCGACTCCGCACGTCGCAGGGGTGGCGGCGTTGCTCTACGCCCAGGGACGCACGGCGGCCAACGTCCACGACGCCCTGG TCGATACCGCCCGCACGCCGGGACTCGGCACTGGAGTGTTCACGAGCAGCTACGGCCACGGCATCGTCGACGCCCAAGCC GCCGTGGCGTATCCGGTCCTGACGGCCACCGTTGCCCGGCCGCACGGGAAGCGGAAGTAG
Upstream 100 bases:
>100_bases CGGGAGTTCTCGCATGCCTCTGCGCACGATCATCAACATCCTCGGCGCGGTCCTGACCGTCGTCGTCGCCACCATCCTCG TCGGCGGCCCCGCCGGCGCC
Downstream 100 bases:
>100_bases ACCGTCGAACTCCGCGCGTGGGGATGAGTCCGCGGCCCCGGTGTTCATGAGTGATCGCGCCGTCAGCGCCGCACGGGCTG GGCAATATAGTCCTCGTTGT
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTNDPLRSQQWGLDQVRAEAAWATTTGSGVVVAVVDSGVDLNHPDLQGQLVPGITTVGCGPKQSYCGDGSWVGMDGAAQP ADSHGTHVSGIVAAAADNGLGVAGVARDAKVMPIKALEDGSGSFGDIANGIRYAVDHGASVVNLSLGAVPGGQALSLTGL DTAVTEAIAYAAAQGVLVVAAAGNESFPVCDTPSFEAGALCVTSTTRDETPAWYSNGAIKPDVDAVAAPGGAGLVACADD IVSTVPVGTGSAACGQQDYDYYAGTSMATPHVAGVAALLYAQGRTAANVHDALVDTARTPGLGTGVFTSSYGHGIVDAQA AVAYPVLTATVARPHGKRK
Sequences:
>Translated_339_residues MTNDPLRSQQWGLDQVRAEAAWATTTGSGVVVAVVDSGVDLNHPDLQGQLVPGITTVGCGPKQSYCGDGSWVGMDGAAQP ADSHGTHVSGIVAAAADNGLGVAGVARDAKVMPIKALEDGSGSFGDIANGIRYAVDHGASVVNLSLGAVPGGQALSLTGL DTAVTEAIAYAAAQGVLVVAAAGNESFPVCDTPSFEAGALCVTSTTRDETPAWYSNGAIKPDVDAVAAPGGAGLVACADD IVSTVPVGTGSAACGQQDYDYYAGTSMATPHVAGVAALLYAQGRTAANVHDALVDTARTPGLGTGVFTSSYGHGIVDAQA AVAYPVLTATVARPHGKRK >Mature_338_residues TNDPLRSQQWGLDQVRAEAAWATTTGSGVVVAVVDSGVDLNHPDLQGQLVPGITTVGCGPKQSYCGDGSWVGMDGAAQPA DSHGTHVSGIVAAAADNGLGVAGVARDAKVMPIKALEDGSGSFGDIANGIRYAVDHGASVVNLSLGAVPGGQALSLTGLD TAVTEAIAYAAAQGVLVVAAAGNESFPVCDTPSFEAGALCVTSTTRDETPAWYSNGAIKPDVDAVAAPGGAGLVACADDI VSTVPVGTGSAACGQQDYDYYAGTSMATPHVAGVAALLYAQGRTAANVHDALVDTARTPGLGTGVFTSSYGHGIVDAQAA VAYPVLTATVARPHGKRK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320775, Length=269, Percent_Identity=29.368029739777, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6324576, Length=296, Percent_Identity=26.6891891891892, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319893, Length=267, Percent_Identity=25.8426966292135, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: =3.4.21.66 [H]
Molecular weight: Translated: 33675; Mature: 33543
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDPLRSQQWGLDQVRAEAAWATTTGSGVVVAVVDSGVDLNHPDLQGQLVPGITTVGCG CCCCCCCCHHCCHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCCCCCEEECCEEEECCC PKQSYCGDGSWVGMDGAAQPADSHGTHVSGIVAAAADNGLGVAGVARDAKVMPIKALEDG CCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCC SGSFGDIANGIRYAVDHGASVVNLSLGAVPGGQALSLTGLDTAVTEAIAYAAAQGVLVVA CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEE AAGNESFPVCDTPSFEAGALCVTSTTRDETPAWYSNGAIKPDVDAVAAPGGAGLVACADD ECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCHHEECCCCCEEEEEHHH IVSTVPVGTGSAACGQQDYDYYAGTSMATPHVAGVAALLYAQGRTAANVHDALVDTARTP HHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC GLGTGVFTSSYGHGIVDAQAAVAYPVLTATVARPHGKRK CCCCCCEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TNDPLRSQQWGLDQVRAEAAWATTTGSGVVVAVVDSGVDLNHPDLQGQLVPGITTVGCG CCCCCCCHHCCHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCCCCCEEECCEEEECCC PKQSYCGDGSWVGMDGAAQPADSHGTHVSGIVAAAADNGLGVAGVARDAKVMPIKALEDG CCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCC SGSFGDIANGIRYAVDHGASVVNLSLGAVPGGQALSLTGLDTAVTEAIAYAAAQGVLVVA CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEE AAGNESFPVCDTPSFEAGALCVTSTTRDETPAWYSNGAIKPDVDAVAAPGGAGLVACADD ECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCHHEECCCCCEEEEEHHH IVSTVPVGTGSAACGQQDYDYYAGTSMATPHVAGVAALLYAQGRTAANVHDALVDTARTP HHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC GLGTGVFTSSYGHGIVDAQAAVAYPVLTATVARPHGKRK CCCCCCEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2647518; 2689655; 2196375; 1993669 [H]