Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717496

Identifier: 119717496

GI number: 119717496

Start: 3474866

End: 3475315

Strand: Reverse

Name: 119717496

Synonym: Noca_3272

Alternate gene names: NA

Gene position: 3475315-3474866 (Counterclockwise)

Preceding gene: 119717497

Following gene: 119717495

Centisome position: 69.7

GC content: 72.89

Gene sequence:

>450_bases
GTGCCCGAGGACCGGCCGGCCCGGCCGACCCGGTCGGCGTACGTCCACTGGGAGCAGGCCACCACGCGCTGGGCGGACAT
CGACGTCTACGGCCACATGAACAACGCGCGCTACTTCGAGCTGATCGACACCGTGGTCAACAACCACCTGGCCACCGCGA
CCGGCGTCGACATCCGCGACCTGCCGGCGATCGGCGTGGTCGCCGAGGTGTCCTGCCGCTACTTCGCCGAGGTCGGCTAC
CCCGAGCCCGTCGACCTCGGGGTGGTGGTCGACCGGATCGGGACCTCGTCGGTGGTCTACCGGGTCGGGCTGTTCCAGGG
GCCGGGGGACGGGGCCGCGGCCGAGGGCCGGTTCGTGCACGTGTACGTCGACAACACCGACCCGGCGCGACCCGTCACCC
CGGTCCCGGACGTCATCCGGGCCGCCGTCGCGCCCCTCCTGCGCACCTGA

Upstream 100 bases:

>100_bases
GGACCATGGAGGTCGGAGACGCGCTGTACGGCGTCACCATGCGTGGCGACGGCGTGTCCGCGGTGATCAGCCAGCGGCTG
CGCGACGCGGAGTCCGCCTA

Downstream 100 bases:

>100_bases
CGCGAGCCGGTGCCCAGGCGTGTGGGACGGTGGGTCCCGGGGTACGTCGCACGTGTCCCCGTCCTGTGCTCGGTCTCGGA
GGTGTGCCGCGGTGTTGCCC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase; Thioesterase Protein

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MPEDRPARPTRSAYVHWEQATTRWADIDVYGHMNNARYFELIDTVVNNHLATATGVDIRDLPAIGVVAEVSCRYFAEVGY
PEPVDLGVVVDRIGTSSVVYRVGLFQGPGDGAAAEGRFVHVYVDNTDPARPVTPVPDVIRAAVAPLLRT

Sequences:

>Translated_149_residues
MPEDRPARPTRSAYVHWEQATTRWADIDVYGHMNNARYFELIDTVVNNHLATATGVDIRDLPAIGVVAEVSCRYFAEVGY
PEPVDLGVVVDRIGTSSVVYRVGLFQGPGDGAAAEGRFVHVYVDNTDPARPVTPVPDVIRAAVAPLLRT
>Mature_148_residues
PEDRPARPTRSAYVHWEQATTRWADIDVYGHMNNARYFELIDTVVNNHLATATGVDIRDLPAIGVVAEVSCRYFAEVGYP
EPVDLGVVVDRIGTSSVVYRVGLFQGPGDGAAAEGRFVHVYVDNTDPARPVTPVPDVIRAAVAPLLRT

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16289; Mature: 16158

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDRPARPTRSAYVHWEQATTRWADIDVYGHMNNARYFELIDTVVNNHLATATGVDIRD
CCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
LPAIGVVAEVSCRYFAEVGYPEPVDLGVVVDRIGTSSVVYRVGLFQGPGDGAAAEGRFVH
CCCCCHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEE
VYVDNTDPARPVTPVPDVIRAAVAPLLRT
EEECCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEDRPARPTRSAYVHWEQATTRWADIDVYGHMNNARYFELIDTVVNNHLATATGVDIRD
CCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
LPAIGVVAEVSCRYFAEVGYPEPVDLGVVVDRIGTSSVVYRVGLFQGPGDGAAAEGRFVH
CCCCCHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEE
VYVDNTDPARPVTPVPDVIRAAVAPLLRT
EEECCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA