Click here to switch to the map view.

The map label for this gene is glnD [H]

Identifier: 119717491

GI number: 119717491

Start: 3469207

End: 3471330

Strand: Reverse

Name: glnD [H]

Synonym: Noca_3267

Alternate gene names: 119717491

Gene position: 3471330-3469207 (Counterclockwise)

Preceding gene: 119717492

Following gene: 119717490

Centisome position: 69.62

GC content: 77.12

Gene sequence:

>2124_bases
GTGGCGGTCGGCGGCTACGGCCGCTCCGAGCTCGCGCCGTACTCCGACCTCGACGTCGTGCTCGTCTCCGACGAGGGCGT
GGACGTGCGCTCGGTCGCCGAGCAGGTCTGGTATCCGGTCTGGGACTCTGGCGCCAAGCTGGACCACGCGGTGCGGACGC
TGCCGGAGATGCTCACGGCCGCGGAGGCAGACCTGAAGGTGGTCCTCGGGCTGCTCGACGTCCGCCACCTGGCCGGCGAC
CCGGGGCTGACGCTGCGGCTGCGCACCACGATGCTCGCGCACTGGCGCCGCCATGCCCGGGAGCGGCTCCCGGAGCTGCG
CGAGCTGGTGCGAGCGCGCCATGAGCTCGCGGGCGAGCTCGCCCACCTCTCGGTGCCGGACCTCAAGGAGGCCGAGGGCG
GGCTGCGCGACGCCACCGTGCTCAAGGCGCTGGTCGCCACCTGGCTGGTCGATGTCCCGCACGGCGAGCTCGAGCGCACC
CGCCTCGCGCTCCTCGACGTCCGGGACGTGGTGCACGAGACCGCCGGGCGGGGCACCGACCGGATCGCGCCGGAGCTGTG
GAGCGACGTCGCGCACCGGCTCGACCTGCCCGACGCCCGCGCCGCGCAGGTCCACGTGCGCGAGCTCGGCCGCCGGACCG
CCCACCTCTCGCACCTGACGTGGCGACGTGTGGAGGCGGTGCTGGCCCGCCCCGCGTCCTACCGGGGCGCCCGGAGGCCC
GAGCTCACCCGGCTGGCGCCCGGGGTCGCGCTCTCGTCGGGCGAGGTGGTGCTCGACAACCGGGCGCGACCCGCCGAGGA
CCCGGTGCTGCTGCTGCGCGCGGCGGCGGCCGCCGCCGAGAACGACGTGGTCCTGGCGCCCGCCACGGCCGCGCGCCTGG
TCCGCGAGTGCGCGCCGATGCCGGCGCCGTGGCCGGACGAGGCTCGCCAGCTCCTGGTGCGGATGCTCGCCTCCGGGCGC
GGCCTGCGGGGGGTGTGGGAGACGCTGGAGGAGACCGGCGCGCTCGAGCGGTTCCTGCCGGAGTGGGAGCGGATCCGGCT
GTTGCCGCACGCCTCCGCGATCCACCGGTTCACGGTGGACCGGCACGTGGTCGAGACCTGCGTGGCGGCGTCCGCGCTGA
TCCGCTCGGTGGCGCGGCCCGACGTGCTGATGGTGGCCGCGCTGCTCCACGACATCGGCAAGGGCGGCCTGACCGAGCAC
AGCGTCGCGGGGGAGCCGATCGCCCGCGACATCGCCGAGCGGATGGGCTTCGCGCCCGACGCCGTCGACCTCGTGACCCG
GCTGGTGCGCTGGCACCTGCTGCTGGCGGAGACCGCGACCACGCGTGATCCCGACGACCCGGCCACCGCCGAACGGGTCG
CGTCCCGCCTCGGCGGCGGGGAGGCGCTGGACCTGCTGGTCGCCCTCACCGAGGCCGATGCCCGGGCGACCGCACCCAAG
GCGTGGTCGTCGTGGCGCGCCGGGCTGGTCCACGACCTGGCCCGCCGGACCCGGGCGGTCCTCGACCCGCACCAACCGCC
GCCGGCGGTCGCCGTCGAGGAGGTCGAGGTGCCGCGCGCCGTACGCCGCGGCTCGACCTCGGTCGTGGTCGTGCCGGCGA
CCGACGGCTCCCGGGTCACGGTGATCGCACCCGACCGGGTCGGCCTCCTGGCCGACGTGGCCGCCGCGCTCGCCCTCCAG
CGGATCCCGGTGCGCGCGGCGCGGGCGTGGTCGCAGGACCGGTACGCCGTCTCGGTCTGGGAGGTCGGGGTGCCCGACCT
CGACGCGGCGGTCCTGCGGGAGCGGTTGGCGGCGGTGGCCGAGGGCAAGGTCGACGTCGCCCGCCGGCTCCGCGGCGTCG
GCGCGGCCGGGTCGCTCGAGCCGTCGGTCGCGGTGCGGCCGGAGGCATCCGAGCAGGCCACGGTGCTGGAGGTGCGCGCC
GCCGACCAGCTCGGGGTGATCCACCGGGTCTGCGCGGCGCTGGCCGGGCTCGACGTGGCGGTGCGCTCCGCGCACGTGGA
CACCCTGGGGCCCCAGGCCGTGGACGTGTTCTACCTCCAGGAGTCGGCCGCCGGCGTCCTCACCGACCAGCGGGCCGCCG
AGGCCGCCCACGCCGTCCGCGCCGCACTCAGCGGGTCGGGGTGA

Upstream 100 bases:

>100_bases
CCTGACTGCCGACGACAGAGCCCTGCGTGCGGCCGAGGCCGACGTCCTCTGCGCGCGGGCCTACGGGGCGTACGGCGGCC
CCGAGGCCGGTGCCGCCCTG

Downstream 100 bases:

>100_bases
GGCGTGCGGGTTTCGGCCGCCAGGTGAAACCTGTGGGACTCCTGAGGCGGCCCGGCCCGGGGACGATGCGCCCGCCTGCG
GGGCCGCCGTCTAGGCTGAA

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]

Number of amino acids: Translated: 707; Mature: 706

Protein sequence:

>707_residues
MAVGGYGRSELAPYSDLDVVLVSDEGVDVRSVAEQVWYPVWDSGAKLDHAVRTLPEMLTAAEADLKVVLGLLDVRHLAGD
PGLTLRLRTTMLAHWRRHARERLPELRELVRARHELAGELAHLSVPDLKEAEGGLRDATVLKALVATWLVDVPHGELERT
RLALLDVRDVVHETAGRGTDRIAPELWSDVAHRLDLPDARAAQVHVRELGRRTAHLSHLTWRRVEAVLARPASYRGARRP
ELTRLAPGVALSSGEVVLDNRARPAEDPVLLLRAAAAAAENDVVLAPATAARLVRECAPMPAPWPDEARQLLVRMLASGR
GLRGVWETLEETGALERFLPEWERIRLLPHASAIHRFTVDRHVVETCVAASALIRSVARPDVLMVAALLHDIGKGGLTEH
SVAGEPIARDIAERMGFAPDAVDLVTRLVRWHLLLAETATTRDPDDPATAERVASRLGGGEALDLLVALTEADARATAPK
AWSSWRAGLVHDLARRTRAVLDPHQPPPAVAVEEVEVPRAVRRGSTSVVVVPATDGSRVTVIAPDRVGLLADVAAALALQ
RIPVRAARAWSQDRYAVSVWEVGVPDLDAAVLRERLAAVAEGKVDVARRLRGVGAAGSLEPSVAVRPEASEQATVLEVRA
ADQLGVIHRVCAALAGLDVAVRSAHVDTLGPQAVDVFYLQESAAGVLTDQRAAEAAHAVRAALSGSG

Sequences:

>Translated_707_residues
MAVGGYGRSELAPYSDLDVVLVSDEGVDVRSVAEQVWYPVWDSGAKLDHAVRTLPEMLTAAEADLKVVLGLLDVRHLAGD
PGLTLRLRTTMLAHWRRHARERLPELRELVRARHELAGELAHLSVPDLKEAEGGLRDATVLKALVATWLVDVPHGELERT
RLALLDVRDVVHETAGRGTDRIAPELWSDVAHRLDLPDARAAQVHVRELGRRTAHLSHLTWRRVEAVLARPASYRGARRP
ELTRLAPGVALSSGEVVLDNRARPAEDPVLLLRAAAAAAENDVVLAPATAARLVRECAPMPAPWPDEARQLLVRMLASGR
GLRGVWETLEETGALERFLPEWERIRLLPHASAIHRFTVDRHVVETCVAASALIRSVARPDVLMVAALLHDIGKGGLTEH
SVAGEPIARDIAERMGFAPDAVDLVTRLVRWHLLLAETATTRDPDDPATAERVASRLGGGEALDLLVALTEADARATAPK
AWSSWRAGLVHDLARRTRAVLDPHQPPPAVAVEEVEVPRAVRRGSTSVVVVPATDGSRVTVIAPDRVGLLADVAAALALQ
RIPVRAARAWSQDRYAVSVWEVGVPDLDAAVLRERLAAVAEGKVDVARRLRGVGAAGSLEPSVAVRPEASEQATVLEVRA
ADQLGVIHRVCAALAGLDVAVRSAHVDTLGPQAVDVFYLQESAAGVLTDQRAAEAAHAVRAALSGSG
>Mature_706_residues
AVGGYGRSELAPYSDLDVVLVSDEGVDVRSVAEQVWYPVWDSGAKLDHAVRTLPEMLTAAEADLKVVLGLLDVRHLAGDP
GLTLRLRTTMLAHWRRHARERLPELRELVRARHELAGELAHLSVPDLKEAEGGLRDATVLKALVATWLVDVPHGELERTR
LALLDVRDVVHETAGRGTDRIAPELWSDVAHRLDLPDARAAQVHVRELGRRTAHLSHLTWRRVEAVLARPASYRGARRPE
LTRLAPGVALSSGEVVLDNRARPAEDPVLLLRAAAAAAENDVVLAPATAARLVRECAPMPAPWPDEARQLLVRMLASGRG
LRGVWETLEETGALERFLPEWERIRLLPHASAIHRFTVDRHVVETCVAASALIRSVARPDVLMVAALLHDIGKGGLTEHS
VAGEPIARDIAERMGFAPDAVDLVTRLVRWHLLLAETATTRDPDDPATAERVASRLGGGEALDLLVALTEADARATAPKA
WSSWRAGLVHDLARRTRAVLDPHQPPPAVAVEEVEVPRAVRRGSTSVVVVPATDGSRVTVIAPDRVGLLADVAAALALQR
IPVRAARAWSQDRYAVSVWEVGVPDLDAAVLRERLAAVAEGKVDVARRLRGVGAAGSLEPSVAVRPEASEQATVLEVRAA
DQLGVIHRVCAALAGLDVAVRSAHVDTLGPQAVDVFYLQESAAGVLTDQRAAEAAHAVRAALSGSG

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family [H]

Homologues:

Organism=Escherichia coli, GI1786363, Length=543, Percent_Identity=26.7034990791897, Blast_Score=149, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546 [H]

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]

EC number: =2.7.7.59 [H]

Molecular weight: Translated: 76104; Mature: 75973

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGGYGRSELAPYSDLDVVLVSDEGVDVRSVAEQVWYPVWDSGAKLDHAVRTLPEMLTA
CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AEADLKVVLGLLDVRHLAGDPGLTLRLRTTMLAHWRRHARERLPELRELVRARHELAGEL
HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHLSVPDLKEAEGGLRDATVLKALVATWLVDVPHGELERTRLALLDVRDVVHETAGRGTD
HHCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
RIAPELWSDVAHRLDLPDARAAQVHVRELGRRTAHLSHLTWRRVEAVLARPASYRGARRP
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
ELTRLAPGVALSSGEVVLDNRARPAEDPVLLLRAAAAAAENDVVLAPATAARLVRECAPM
CHHHHCCCCEECCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCC
PAPWPDEARQLLVRMLASGRGLRGVWETLEETGALERFLPEWERIRLLPHASAIHRFTVD
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHCCCHHHEEECCCHHHHHHHHHH
RHVVETCVAASALIRSVARPDVLMVAALLHDIGKGGLTEHSVAGEPIARDIAERMGFAPD
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
AVDLVTRLVRWHLLLAETATTRDPDDPATAERVASRLGGGEALDLLVALTEADARATAPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH
AWSSWRAGLVHDLARRTRAVLDPHQPPPAVAVEEVEVPRAVRRGSTSVVVVPATDGSRVT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEE
VIAPDRVGLLADVAAALALQRIPVRAARAWSQDRYAVSVWEVGVPDLDAAVLRERLAAVA
EECCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
EGKVDVARRLRGVGAAGSLEPSVAVRPEASEQATVLEVRAADQLGVIHRVCAALAGLDVA
CCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
VRSAHVDTLGPQAVDVFYLQESAAGVLTDQRAAEAAHAVRAALSGSG
HHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVGGYGRSELAPYSDLDVVLVSDEGVDVRSVAEQVWYPVWDSGAKLDHAVRTLPEMLTA
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AEADLKVVLGLLDVRHLAGDPGLTLRLRTTMLAHWRRHARERLPELRELVRARHELAGEL
HHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHLSVPDLKEAEGGLRDATVLKALVATWLVDVPHGELERTRLALLDVRDVVHETAGRGTD
HHCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
RIAPELWSDVAHRLDLPDARAAQVHVRELGRRTAHLSHLTWRRVEAVLARPASYRGARRP
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
ELTRLAPGVALSSGEVVLDNRARPAEDPVLLLRAAAAAAENDVVLAPATAARLVRECAPM
CHHHHCCCCEECCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCC
PAPWPDEARQLLVRMLASGRGLRGVWETLEETGALERFLPEWERIRLLPHASAIHRFTVD
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHCCCHHHEEECCCHHHHHHHHHH
RHVVETCVAASALIRSVARPDVLMVAALLHDIGKGGLTEHSVAGEPIARDIAERMGFAPD
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
AVDLVTRLVRWHLLLAETATTRDPDDPATAERVASRLGGGEALDLLVALTEADARATAPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH
AWSSWRAGLVHDLARRTRAVLDPHQPPPAVAVEEVEVPRAVRRGSTSVVVVPATDGSRVT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEE
VIAPDRVGLLADVAAALALQRIPVRAARAWSQDRYAVSVWEVGVPDLDAAVLRERLAAVA
EECCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
EGKVDVARRLRGVGAAGSLEPSVAVRPEASEQATVLEVRAADQLGVIHRVCAALAGLDVA
CCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
VRSAHVDTLGPQAVDVFYLQESAAGVLTDQRAAEAAHAVRAALSGSG
HHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]