Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119717048

Identifier: 119717048

GI number: 119717048

Start: 2993917

End: 2995227

Strand: Reverse

Name: 119717048

Synonym: Noca_2824

Alternate gene names: NA

Gene position: 2995227-2993917 (Counterclockwise)

Preceding gene: 119717049

Following gene: 119717047

Centisome position: 60.07

GC content: 71.62

Gene sequence:

>1311_bases
ATGCTGGTGAACATCTACCACGACAGCCCGCGGGAGCACCGTCGGCTGCTGGTGGCCGGTGTCGCGTTCCTGGCGGTCAT
CGCCCTGCTGATCGCGCTGTCGATCGCGATCTACCAGAAGGTGTTCGAGCCGGCCACGACCGTGACGATCCAGGCCGACC
GGGCGGGCCTGCAGCTGGCGAAGTTCGGGGACGTCCGGCTGCACGGCGCCCTGGTCGGCCAGGTCCGCTCGGTGTCGCAG
GACGGTGACCAGGCGGTCATCACGGTCGCCCTCCAGCCGGACGAGGCGAAGCGGATCCCGGAGAACGTGTCGGTGCAGAT
CCTGCCGACGACGCTGTTCGGCCAGAAGTTCATCTCGCTCGTGACGCCCGCCGACCCGTCGCCGACGCCGCTCGCGGACG
GCGACGTGATCCCCGCCGACCGGGTCGAGACGAACGTCGAGCTCAGCCGGATCCTCGCGAACCTGTTCCCGCTGCTGCGC
TCGGTCCGACCGGCCGATCTCAACGCCACGCTGAATGCGCTCGCCACCGCCCTCGGCGGGCGCGGCGAGCAGCTCGGCGA
GACCATGGACCGGCTCGACGACTACCTCGGGGAGATCGACGACCACCTGCCGACGCTGCGCCAGGACCTGGTCAAGCTCG
CCGACGTCGCCGACACCTACGACCTCGCCGCGCCCGACCTCCTCGGTGTGCTCCGCGACCTCACGACCACCGGCCGGACC
GTGATCGACAACAAGGCCCAGCTCGGCACCTTCTTCGCGGACCTCCAGGGCCTGGCGGACACGTCGACGCGGGTCCTGGA
CGAGAACTCCACCAACCTGATCCGGGTCGGCCGGGTCACCGAGCCGATGCTGCGCCTGCTGGCCGTGTACTCGCCCGAGC
TGCCCTGCCTGCTCGCGGGTGCGGCCCGCTACGCACCGCGGTTGGCCCGCACCTTCGAGGGCAACCAGGTCAAGCAGTAC
ATCGAGTTCGGCACCGCCCAGTACCGCCCCTACGACGAGCGGGACCGGCCGACGTACGGCGAGGTCGGCCACGGACCCTG
GTGCCTCGGCCTGCCGCACCCGAAGGTCCCGGCGCCGCCGGTCGCGCTCGACCAGGGCAGCGACATGGACGAGCACCCGC
CGGACAGCCCGCTGCCGACGCAGCTCGGGCTGGGCCGGATCGGCGCGGACTACTCCGGCACCGCGGGGGAGCGGCAGGTC
GTCAACGCGCTGATCGCCCAGCTCACCGGCCGGCCAGCGGACAGCTACGGCTCCCTGGGCTCGCTGCTCTACGGCCCGGT
CGTGAGCTCCCCCGCTGGAGGTGGGAGGTGA

Upstream 100 bases:

>100_bases
ATCCGCACCAGCATCGTGACGATCGTGGTCGCCGACTTCTTCCTGAGCTTCGCGATCTGGGGCTCCACCACCACCGTCCG
GATCACGGGGTAGCCGCGCG

Downstream 100 bases:

>100_bases
TGTCGCGCAACTCGACCACGATCGCCGCCGGCATCAAGCTCGGGATCTTCACCGTGGTCTCGATCCTGGTGACCGGCCTG
CTCGCGGCCATCATGGGCAA

Product: virulence factor Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; Mce Family A; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Protein; MCE-Family Protein; Cell Invasion Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLVNIYHDSPREHRRLLVAGVAFLAVIALLIALSIAIYQKVFEPATTVTIQADRAGLQLAKFGDVRLHGALVGQVRSVSQ
DGDQAVITVALQPDEAKRIPENVSVQILPTTLFGQKFISLVTPADPSPTPLADGDVIPADRVETNVELSRILANLFPLLR
SVRPADLNATLNALATALGGRGEQLGETMDRLDDYLGEIDDHLPTLRQDLVKLADVADTYDLAAPDLLGVLRDLTTTGRT
VIDNKAQLGTFFADLQGLADTSTRVLDENSTNLIRVGRVTEPMLRLLAVYSPELPCLLAGAARYAPRLARTFEGNQVKQY
IEFGTAQYRPYDERDRPTYGEVGHGPWCLGLPHPKVPAPPVALDQGSDMDEHPPDSPLPTQLGLGRIGADYSGTAGERQV
VNALIAQLTGRPADSYGSLGSLLYGPVVSSPAGGGR

Sequences:

>Translated_436_residues
MLVNIYHDSPREHRRLLVAGVAFLAVIALLIALSIAIYQKVFEPATTVTIQADRAGLQLAKFGDVRLHGALVGQVRSVSQ
DGDQAVITVALQPDEAKRIPENVSVQILPTTLFGQKFISLVTPADPSPTPLADGDVIPADRVETNVELSRILANLFPLLR
SVRPADLNATLNALATALGGRGEQLGETMDRLDDYLGEIDDHLPTLRQDLVKLADVADTYDLAAPDLLGVLRDLTTTGRT
VIDNKAQLGTFFADLQGLADTSTRVLDENSTNLIRVGRVTEPMLRLLAVYSPELPCLLAGAARYAPRLARTFEGNQVKQY
IEFGTAQYRPYDERDRPTYGEVGHGPWCLGLPHPKVPAPPVALDQGSDMDEHPPDSPLPTQLGLGRIGADYSGTAGERQV
VNALIAQLTGRPADSYGSLGSLLYGPVVSSPAGGGR
>Mature_436_residues
MLVNIYHDSPREHRRLLVAGVAFLAVIALLIALSIAIYQKVFEPATTVTIQADRAGLQLAKFGDVRLHGALVGQVRSVSQ
DGDQAVITVALQPDEAKRIPENVSVQILPTTLFGQKFISLVTPADPSPTPLADGDVIPADRVETNVELSRILANLFPLLR
SVRPADLNATLNALATALGGRGEQLGETMDRLDDYLGEIDDHLPTLRQDLVKLADVADTYDLAAPDLLGVLRDLTTTGRT
VIDNKAQLGTFFADLQGLADTSTRVLDENSTNLIRVGRVTEPMLRLLAVYSPELPCLLAGAARYAPRLARTFEGNQVKQY
IEFGTAQYRPYDERDRPTYGEVGHGPWCLGLPHPKVPAPPVALDQGSDMDEHPPDSPLPTQLGLGRIGADYSGTAGERQV
VNALIAQLTGRPADSYGSLGSLLYGPVVSSPAGGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46796; Mature: 46796

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVNIYHDSPREHRRLLVAGVAFLAVIALLIALSIAIYQKVFEPATTVTIQADRAGLQLA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE
KFGDVRLHGALVGQVRSVSQDGDQAVITVALQPDEAKRIPENVSVQILPTTLFGQKFISL
CCCCEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCCCCEEEEEEHHHHHHHHHHH
VTPADPSPTPLADGDVIPADRVETNVELSRILANLFPLLRSVRPADLNATLNALATALGG
HCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
RGEQLGETMDRLDDYLGEIDDHLPTLRQDLVKLADVADTYDLAAPDLLGVLRDLTTTGRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE
VIDNKAQLGTFFADLQGLADTSTRVLDENSTNLIRVGRVTEPMLRLLAVYSPELPCLLAG
EECCCHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHH
AARYAPRLARTFEGNQVKQYIEFGTAQYRPYDERDRPTYGEVGHGPWCLGLPHPKVPAPP
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
VALDQGSDMDEHPPDSPLPTQLGLGRIGADYSGTAGERQVVNALIAQLTGRPADSYGSLG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCHH
SLLYGPVVSSPAGGGR
HHHHCCHHCCCCCCCC
>Mature Secondary Structure
MLVNIYHDSPREHRRLLVAGVAFLAVIALLIALSIAIYQKVFEPATTVTIQADRAGLQLA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE
KFGDVRLHGALVGQVRSVSQDGDQAVITVALQPDEAKRIPENVSVQILPTTLFGQKFISL
CCCCEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCCCCEEEEEEHHHHHHHHHHH
VTPADPSPTPLADGDVIPADRVETNVELSRILANLFPLLRSVRPADLNATLNALATALGG
HCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
RGEQLGETMDRLDDYLGEIDDHLPTLRQDLVKLADVADTYDLAAPDLLGVLRDLTTTGRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE
VIDNKAQLGTFFADLQGLADTSTRVLDENSTNLIRVGRVTEPMLRLLAVYSPELPCLLAG
EECCCHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHH
AARYAPRLARTFEGNQVKQYIEFGTAQYRPYDERDRPTYGEVGHGPWCLGLPHPKVPAPP
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
VALDQGSDMDEHPPDSPLPTQLGLGRIGADYSGTAGERQVVNALIAQLTGRPADSYGSLG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCHH
SLLYGPVVSSPAGGGR
HHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA