| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717021
Identifier: 119717021
GI number: 119717021
Start: 2968458
End: 2969612
Strand: Reverse
Name: 119717021
Synonym: Noca_2797
Alternate gene names: NA
Gene position: 2969612-2968458 (Counterclockwise)
Preceding gene: 119717022
Following gene: 119717019
Centisome position: 59.56
GC content: 72.81
Gene sequence:
>1155_bases ATGACTGATCCGCTGGCCCGGGTCCCGTACGTCGACGGGATCGTCACGGCCGCCCAGGTCGCCGAGACCGCGGCGTCGAT CGCCGCGATGCAGGAGGACTGCGGCTCGGTGCCGTGGACGACGGGCGAGCACACCGACGTGTGGAACCACGTCGAGGCGG CGATGGCGATGCTGGTCGGCGGGCAGGTCGAGGCCGCCGAGCGGGCCTACGCGTGGGTCCCGACGGTGCAGCGCGCCGAC GGCTCGGTGCCGATGAAGATCGTCGACGGCGTGGTCGAGGACGCGCGCGGCGAGGTCAACATGTCGGCGTACCTGGCCGT CGGCGTCTGGCACCACTGGCTGGTGCGCCGCGACGTCCGCTTCGTCCAGGAGCACTGGCCGACGGTGCGCTCCGCGCTCG ACTGGGTGGTCTCCCAGCAGCAGCCCTTCGGCGGGATCAACTGGACCCCCACCGAGTCCTTCGCGCTGCTGGCCGGCTGC TCGAGCATCTACCACTCGCTGCGCGCCGGCGTGGCGCTCGCCGACCTGCTCGACGACCCCCAGCCCGAGTGGGAGCTCGC CGGCGGCCGGCTCGGGCACGCGCTGCGCGAGCACCGTGACCTCTTCGCCGACAAGTCGACCTACTCGATGGACTGGTACT ACCCGGTGCTCGGCGGTGCCGTGCGCGGCCGGGACGCCTTCGAGCTCCTGGAGAGCCGGTGGGACGAGTTCGTCGTCCCG GGCTTGGGGATCCACTGCGTCGACACCAATCCCTGGGTGACCGGCGCCGAGACCTGCGAGCTCGCGATGGCGCTCGACGG CCTCGGCGACCACCGGCGCGCGCTGACCCTCCTGCGCGACATCCAGCACCTGCGCGGCGAGGACGGCAAGTACTGGACCG GGTGGGTCTACGGCGACGGGTCGACGGTCGTCCCCGAGGGCGAGCCGCGTGACGTGTACTGGCCGGTGGAGTGCACGACG TACACGGCGGCCGCGGTGATCCTCGCGGTCGACGCGCTCGGTGAGGTGGCCGGCAACAGCACCTCCGGGTCCGGCATCTA CCGCGGGACCTCGCTGGCGCCGCACTTCACCGAGCTCGCGCTCGAGTGCGGCTGCCCGTCAGCCGGCGCTCGGTCGATCC AGGGGGGCTCCAGCCTCGCCGGCGGTGCGGCGTAG
Upstream 100 bases:
>100_bases TGGGAGATCATGAAGCAGCCGAAGGCGCTGCGGCTCGCCGGCCGGGTGCTCGACCCGCTGATCGGCAAGAGCCTGGTCCT CTACTTCCGCAAGCCGGCCG
Downstream 100 bases:
>100_bases CACCCGCATCGAGCCCAGTGCCTCGACCTCGGTGAAGGCGCCGCTCGCGAGCGCGCGGAGGAAGACGTGGTACGGCGGCT GGCCGCCGTCGGCGGGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTDPLARVPYVDGIVTAAQVAETAASIAAMQEDCGSVPWTTGEHTDVWNHVEAAMAMLVGGQVEAAERAYAWVPTVQRAD GSVPMKIVDGVVEDARGEVNMSAYLAVGVWHHWLVRRDVRFVQEHWPTVRSALDWVVSQQQPFGGINWTPTESFALLAGC SSIYHSLRAGVALADLLDDPQPEWELAGGRLGHALREHRDLFADKSTYSMDWYYPVLGGAVRGRDAFELLESRWDEFVVP GLGIHCVDTNPWVTGAETCELAMALDGLGDHRRALTLLRDIQHLRGEDGKYWTGWVYGDGSTVVPEGEPRDVYWPVECTT YTAAAVILAVDALGEVAGNSTSGSGIYRGTSLAPHFTELALECGCPSAGARSIQGGSSLAGGAA
Sequences:
>Translated_384_residues MTDPLARVPYVDGIVTAAQVAETAASIAAMQEDCGSVPWTTGEHTDVWNHVEAAMAMLVGGQVEAAERAYAWVPTVQRAD GSVPMKIVDGVVEDARGEVNMSAYLAVGVWHHWLVRRDVRFVQEHWPTVRSALDWVVSQQQPFGGINWTPTESFALLAGC SSIYHSLRAGVALADLLDDPQPEWELAGGRLGHALREHRDLFADKSTYSMDWYYPVLGGAVRGRDAFELLESRWDEFVVP GLGIHCVDTNPWVTGAETCELAMALDGLGDHRRALTLLRDIQHLRGEDGKYWTGWVYGDGSTVVPEGEPRDVYWPVECTT YTAAAVILAVDALGEVAGNSTSGSGIYRGTSLAPHFTELALECGCPSAGARSIQGGSSLAGGAA >Mature_383_residues TDPLARVPYVDGIVTAAQVAETAASIAAMQEDCGSVPWTTGEHTDVWNHVEAAMAMLVGGQVEAAERAYAWVPTVQRADG SVPMKIVDGVVEDARGEVNMSAYLAVGVWHHWLVRRDVRFVQEHWPTVRSALDWVVSQQQPFGGINWTPTESFALLAGCS SIYHSLRAGVALADLLDDPQPEWELAGGRLGHALREHRDLFADKSTYSMDWYYPVLGGAVRGRDAFELLESRWDEFVVPG LGIHCVDTNPWVTGAETCELAMALDGLGDHRRALTLLRDIQHLRGEDGKYWTGWVYGDGSTVVPEGEPRDVYWPVECTTY TAAAVILAVDALGEVAGNSTSGSGIYRGTSLAPHFTELALECGCPSAGARSIQGGSSLAGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41411; Mature: 41279
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPLARVPYVDGIVTAAQVAETAASIAAMQEDCGSVPWTTGEHTDVWNHVEAAMAMLVG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC GQVEAAERAYAWVPTVQRADGSVPMKIVDGVVEDARGEVNMSAYLAVGVWHHWLVRRDVR CCHHHHHHHEEECCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FVQEHWPTVRSALDWVVSQQQPFGGINWTPTESFALLAGCSSIYHSLRAGVALADLLDDP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QPEWELAGGRLGHALREHRDLFADKSTYSMDWYYPVLGGAVRGRDAFELLESRWDEFVVP CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHEECC GLGIHCVDTNPWVTGAETCELAMALDGLGDHRRALTLLRDIQHLRGEDGKYWTGWVYGDG CCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC STVVPEGEPRDVYWPVECTTYTAAAVILAVDALGEVAGNSTSGSGIYRGTSLAPHFTELA CEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHH LECGCPSAGARSIQGGSSLAGGAA HHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDPLARVPYVDGIVTAAQVAETAASIAAMQEDCGSVPWTTGEHTDVWNHVEAAMAMLVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC GQVEAAERAYAWVPTVQRADGSVPMKIVDGVVEDARGEVNMSAYLAVGVWHHWLVRRDVR CCHHHHHHHEEECCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FVQEHWPTVRSALDWVVSQQQPFGGINWTPTESFALLAGCSSIYHSLRAGVALADLLDDP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QPEWELAGGRLGHALREHRDLFADKSTYSMDWYYPVLGGAVRGRDAFELLESRWDEFVVP CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHEECC GLGIHCVDTNPWVTGAETCELAMALDGLGDHRRALTLLRDIQHLRGEDGKYWTGWVYGDG CCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC STVVPEGEPRDVYWPVECTTYTAAAVILAVDALGEVAGNSTSGSGIYRGTSLAPHFTELA CEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHH LECGCPSAGARSIQGGSSLAGGAA HHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA