| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716949
Identifier: 119716949
GI number: 119716949
Start: 2897503
End: 2898606
Strand: Reverse
Name: 119716949
Synonym: Noca_2724
Alternate gene names: NA
Gene position: 2898606-2897503 (Counterclockwise)
Preceding gene: 119716950
Following gene: 119716948
Centisome position: 58.14
GC content: 71.29
Gene sequence:
>1104_bases ATGCGCACCCCGATCTGCGACACGTTCGGGATCGACTACCCGATCTTCGCCTTCACCCCGTCCGAGCACGTCGCCGCCGC GGTCTCCCGCGCCGGGGGCCTGGGGGTCCTCGGCTGTGTCCGCTTCAACGACCCCGACGAGCTCGAGCGCACCCTGAGCT GGCTCGACGAGAACACCGACGGCAAGCCGTACGGCGTCGACATCGTGATGCCGATGAAGATCCCGACCGAGGGCACCTCG GTCGACCTGAAGTCGATGATCCCCGAGGAGCACGTGAGCTTCGTCGAGCGGACCCTGCAGCGGCTCGGCGTCCCGCCGCT CCCCGAGGGCGAGGGTCGCGACGGGGTGCTCGGCTGGCTGCACTCGGTCGCCCGGTCGCACCTCGACGTCGCGCTCAACC ACCGGACGGTGCTGATCGCGAACGCGCTCGGCTCGCCCCCGGTCGACGTGATCGAGAAGTGCCACGAGCACGGGATCCTG GTCGCCGCCCTCGCCGGGGCTGCGAAGCACGCGCGCTCGCACGTCGCCAACGGCGTCGACGTCATCGTCGCCCAGGGCTA CGAGGCCGGCGGGCACACCGGCGAGGTGGCGAGCATGGTGCTCCAGCCCGACATCGTCGACGCGGTCGGGCCCGACGTCC CCGTGCTCGGAGCCGGCGGGATCGGCTCGGGCCGGCAGGTCGCGGCCTCCCTCGCGCTGGGCTCGCAGGGCGTGTGGACC GGATCGATCTGGCTGGGCACCGAGGAGTACCAGAAGCTGCAGTCCAACGCGGGCTGGACCGAGGCGTTCACCCGGGCGAC CTCCTCCGACACCGTCCGCACCCGCATCTACACGGGCAAGCCGGCCCGGCTGCTGAAGACGAAGTGGACCGAGGCGTGGG CCGAGCAGGACGCACCCGAGCCGCTGCCGATGCCGCTGCAGAACCTCCTGGTCGCCGACGCCCACAACCGGATCAACGCC TCCGGCGACCCCGACGTGATCTCGATGCCGATCGGCCAGATCGTCGGCCGGATGAACCAGGTGCGCCCGGTCGCGGAGGT GATGGCCAGCCTGGTCGCGGAGTTCGAGGAGGCGGTGGGTCGCCTGGAGTCGATCCGGAAGTAG
Upstream 100 bases:
>100_bases CGAAGGCCAAGGAGCTGGCGATGGCCGGCTTCGCCGCCACGGCACCGACCGTCGACCCGACCTCGGTCTGAGGCTCCCTC GATCTGTAGGAGAGATGACC
Downstream 100 bases:
>100_bases CCGCTCGTCGGCAAAATCACGTCGTGCCTGCCACGCTCGTGAGGGGCGGCGTGGCACCCTGGAGTCCAGGGGGATCCAGG GGGGAACCGCACCACCGCGA
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MRTPICDTFGIDYPIFAFTPSEHVAAAVSRAGGLGVLGCVRFNDPDELERTLSWLDENTDGKPYGVDIVMPMKIPTEGTS VDLKSMIPEEHVSFVERTLQRLGVPPLPEGEGRDGVLGWLHSVARSHLDVALNHRTVLIANALGSPPVDVIEKCHEHGIL VAALAGAAKHARSHVANGVDVIVAQGYEAGGHTGEVASMVLQPDIVDAVGPDVPVLGAGGIGSGRQVAASLALGSQGVWT GSIWLGTEEYQKLQSNAGWTEAFTRATSSDTVRTRIYTGKPARLLKTKWTEAWAEQDAPEPLPMPLQNLLVADAHNRINA SGDPDVISMPIGQIVGRMNQVRPVAEVMASLVAEFEEAVGRLESIRK
Sequences:
>Translated_367_residues MRTPICDTFGIDYPIFAFTPSEHVAAAVSRAGGLGVLGCVRFNDPDELERTLSWLDENTDGKPYGVDIVMPMKIPTEGTS VDLKSMIPEEHVSFVERTLQRLGVPPLPEGEGRDGVLGWLHSVARSHLDVALNHRTVLIANALGSPPVDVIEKCHEHGIL VAALAGAAKHARSHVANGVDVIVAQGYEAGGHTGEVASMVLQPDIVDAVGPDVPVLGAGGIGSGRQVAASLALGSQGVWT GSIWLGTEEYQKLQSNAGWTEAFTRATSSDTVRTRIYTGKPARLLKTKWTEAWAEQDAPEPLPMPLQNLLVADAHNRINA SGDPDVISMPIGQIVGRMNQVRPVAEVMASLVAEFEEAVGRLESIRK >Mature_367_residues MRTPICDTFGIDYPIFAFTPSEHVAAAVSRAGGLGVLGCVRFNDPDELERTLSWLDENTDGKPYGVDIVMPMKIPTEGTS VDLKSMIPEEHVSFVERTLQRLGVPPLPEGEGRDGVLGWLHSVARSHLDVALNHRTVLIANALGSPPVDVIEKCHEHGIL VAALAGAAKHARSHVANGVDVIVAQGYEAGGHTGEVASMVLQPDIVDAVGPDVPVLGAGGIGSGRQVAASLALGSQGVWT GSIWLGTEEYQKLQSNAGWTEAFTRATSSDTVRTRIYTGKPARLLKTKWTEAWAEQDAPEPLPMPLQNLLVADAHNRINA SGDPDVISMPIGQIVGRMNQVRPVAEVMASLVAEFEEAVGRLESIRK
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: NA
Molecular weight: Translated: 39158; Mature: 39158
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPICDTFGIDYPIFAFTPSEHVAAAVSRAGGLGVLGCVRFNDPDELERTLSWLDENTD CCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCC GKPYGVDIVMPMKIPTEGTSVDLKSMIPEEHVSFVERTLQRLGVPPLPEGEGRDGVLGWL CCCEEEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH HSVARSHLDVALNHRTVLIANALGSPPVDVIEKCHEHGILVAALAGAAKHARSHVANGVD HHHHHHHHHEEECCCEEEEEECCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCE VIVAQGYEAGGHTGEVASMVLQPDIVDAVGPDVPVLGAGGIGSGRQVAASLALGSQGVWT EEEECCCCCCCCCHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCCEE GSIWLGTEEYQKLQSNAGWTEAFTRATSSDTVRTRIYTGKPARLLKTKWTEAWAEQDAPE EEEEECHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCC PLPMPLQNLLVADAHNRINASGDPDVISMPIGQIVGRMNQVRPVAEVMASLVAEFEEAVG CCCCCHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RLESIRK HHHHHCC >Mature Secondary Structure MRTPICDTFGIDYPIFAFTPSEHVAAAVSRAGGLGVLGCVRFNDPDELERTLSWLDENTD CCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCC GKPYGVDIVMPMKIPTEGTSVDLKSMIPEEHVSFVERTLQRLGVPPLPEGEGRDGVLGWL CCCEEEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH HSVARSHLDVALNHRTVLIANALGSPPVDVIEKCHEHGILVAALAGAAKHARSHVANGVD HHHHHHHHHEEECCCEEEEEECCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCE VIVAQGYEAGGHTGEVASMVLQPDIVDAVGPDVPVLGAGGIGSGRQVAASLALGSQGVWT EEEECCCCCCCCCHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCCEE GSIWLGTEEYQKLQSNAGWTEAFTRATSSDTVRTRIYTGKPARLLKTKWTEAWAEQDAPE EEEEECHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCC PLPMPLQNLLVADAHNRINASGDPDVISMPIGQIVGRMNQVRPVAEVMASLVAEFEEAVG CCCCCHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RLESIRK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]