| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is pyrG
Identifier: 119716711
GI number: 119716711
Start: 2652492
End: 2654201
Strand: Direct
Name: pyrG
Synonym: Noca_2485
Alternate gene names: 119716711
Gene position: 2652492-2654201 (Clockwise)
Preceding gene: 119716710
Following gene: 119716712
Centisome position: 53.2
GC content: 69.77
Gene sequence:
>1710_bases GTGAACCAGGCGACGCCCACCAAGCACGTGTTCGTGACCGGAGGCGTCGCCTCCTCGCTCGGGAAGGGCCTGACGGCTTC CAGCCTCGGTAGCCTCCTGCGCTCGCGCGGTCTGCGCGTCACCATGCAGAAGCTGGACCCCTACCTCAACGTCGACCCGG GGACGATGAACCCGTTCCAGCACGGCGAGGTGTTCGTCACCAACGACGGAGCCGAGACCGACCTCGACATCGGGCACTAC GAGCGGTTCCTCGACACCGACCTGAGCCAGATCGCGAACGTCACCACCGGCCAGGTGTACTCCAGCGTGATCGCCAAGGA GCGCCGCGGCGACTACCTGGGCGACACCGTGCAGGTGATCCCGCACATCACGAACGAGATCAAGGAGCGGATCCTCGCCA TGGGCGGCACCGGCGAGGACGGCCGGAGCGTCGACGTGGTGATCACCGAGGTCGGCGGCACCGTGGGCGACATCGAGTCG CTGCCGTTCCTCGAGGCCGCCCGTCAGGTGCGCCACGACATCGGGCGGGAGAACTGCTTCTTCCTGCACGTCTCCCTGGT GCCCTACATCGGGCCGTCGGGTGAGCTGAAGACCAAGCCCACCCAGCACTCGGTGGCCGCGTTGCGTCAGGTCGGCATCC AGCCCGACGCCGTCGTCTGCCGCGCCGATCGCGAGCTCCCGCCGTCGATCAAGAAGAAGATCTCGTTGATGTGCGACGTC GACCAGGATGCGGTGGTCACGTGCGCGGACGCGCCGTCGATCTACGACATCCCCAAGGTGCTGCACCGCGAGGGCCTGGA CGCGTACCTGGTGCGCCGGCTCGACCTGCCCTTCCGCGACGTGGACTGGACGGTGTGGGACGACCTGCTGCGCCGGGTGC ACCATCCGAAGGAGGAGGTGACGGTCGCGCTGGTCGGCAAGTACGTCGACCTGCCCGACGCGTACCTGTCGGTCGCCGAG GCACTGCGCGCCGGCGGCTTCGCCCATGAGGCCAAGGTCCAGCTGCGGTGGGTCGCCTCCGACGAGTGCCAGACGGCGGC CGGAGCGGCGCGCAACCTGCAGGACGTCGACGCGATCTGCGTGCCCGGCGGATTCGGGGTACGCGGCATCGAGGGCAAGC TGGGTGCGCTCACCTACGCCCGCACGCACGGCATCCCCACGCTGGGGCTGTGCCTGGGCCTGCAGTGCATGGTGATCGAG TACGCCCGCAACGTGGTGGGGCTGGAGAAGGCGGGGTCCACGGAGTTCGACCCCGACACCCCGGAGCCGGTTATCGCGAC CATGGCCGAGCAGAAGGCCTTCGTCGAGGGCGCCGGCGACCTCGGCGGGACGATGCGGCTGGGCCTGTACCCGGCGGCCC TCAAGGACGGCTCGATCGCCCGGGAGGTCTACGGCAGCAGCCTCATCGAGGAGCGGCACCGGCACCGCTACGAGGTCAAC AACGCCTACCGCGACCAGCTCGAGGAGGCCGGTCTGGTCTTCTCCGGCACCTCGCCGGACAACAGCCTGGTGGAGTACGT CGAGCTGCCGCGAGACACGCACCCCTACTACATCTCCACGCAGGCGCACCCCGAGCTGCGCTCCCGCCCGACCCGGCCGC ATCCGCTGTTCGCGGGCCTGGTCGGCGCGGCCATCGAGCGCCAGCGCGAGCTGCGGTTCCCCATCGACGAGACCGGGCTG CGCCGCGAGCCCGAGCCCGACGAGGACTGA
Upstream 100 bases:
>100_bases CCGCCGTGCTCGCCCTGATCCGGTCGATGTCGGTCCAGGGTGGGTCCTTCGGTGCGTCGGGGTCGGACGGAACCGTTCCT CTGACGTAGGATGGAGTTCC
Downstream 100 bases:
>100_bases GCCCGACGACGGAGGAACGGGTGCCCGAGCTCGCCGACCGGCCCGAGGCGTGGCCGGTCGAGGACAGCGGCTATCCCTAC GACGGCGACGGTTGGGTCGT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MNQATPTKHVFVTGGVASSLGKGLTASSLGSLLRSRGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTNDGAETDLDIGHY ERFLDTDLSQIANVTTGQVYSSVIAKERRGDYLGDTVQVIPHITNEIKERILAMGGTGEDGRSVDVVITEVGGTVGDIES LPFLEAARQVRHDIGRENCFFLHVSLVPYIGPSGELKTKPTQHSVAALRQVGIQPDAVVCRADRELPPSIKKKISLMCDV DQDAVVTCADAPSIYDIPKVLHREGLDAYLVRRLDLPFRDVDWTVWDDLLRRVHHPKEEVTVALVGKYVDLPDAYLSVAE ALRAGGFAHEAKVQLRWVASDECQTAAGAARNLQDVDAICVPGGFGVRGIEGKLGALTYARTHGIPTLGLCLGLQCMVIE YARNVVGLEKAGSTEFDPDTPEPVIATMAEQKAFVEGAGDLGGTMRLGLYPAALKDGSIAREVYGSSLIEERHRHRYEVN NAYRDQLEEAGLVFSGTSPDNSLVEYVELPRDTHPYYISTQAHPELRSRPTRPHPLFAGLVGAAIERQRELRFPIDETGL RREPEPDED
Sequences:
>Translated_569_residues MNQATPTKHVFVTGGVASSLGKGLTASSLGSLLRSRGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTNDGAETDLDIGHY ERFLDTDLSQIANVTTGQVYSSVIAKERRGDYLGDTVQVIPHITNEIKERILAMGGTGEDGRSVDVVITEVGGTVGDIES LPFLEAARQVRHDIGRENCFFLHVSLVPYIGPSGELKTKPTQHSVAALRQVGIQPDAVVCRADRELPPSIKKKISLMCDV DQDAVVTCADAPSIYDIPKVLHREGLDAYLVRRLDLPFRDVDWTVWDDLLRRVHHPKEEVTVALVGKYVDLPDAYLSVAE ALRAGGFAHEAKVQLRWVASDECQTAAGAARNLQDVDAICVPGGFGVRGIEGKLGALTYARTHGIPTLGLCLGLQCMVIE YARNVVGLEKAGSTEFDPDTPEPVIATMAEQKAFVEGAGDLGGTMRLGLYPAALKDGSIAREVYGSSLIEERHRHRYEVN NAYRDQLEEAGLVFSGTSPDNSLVEYVELPRDTHPYYISTQAHPELRSRPTRPHPLFAGLVGAAIERQRELRFPIDETGL RREPEPDED >Mature_569_residues MNQATPTKHVFVTGGVASSLGKGLTASSLGSLLRSRGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTNDGAETDLDIGHY ERFLDTDLSQIANVTTGQVYSSVIAKERRGDYLGDTVQVIPHITNEIKERILAMGGTGEDGRSVDVVITEVGGTVGDIES LPFLEAARQVRHDIGRENCFFLHVSLVPYIGPSGELKTKPTQHSVAALRQVGIQPDAVVCRADRELPPSIKKKISLMCDV DQDAVVTCADAPSIYDIPKVLHREGLDAYLVRRLDLPFRDVDWTVWDDLLRRVHHPKEEVTVALVGKYVDLPDAYLSVAE ALRAGGFAHEAKVQLRWVASDECQTAAGAARNLQDVDAICVPGGFGVRGIEGKLGALTYARTHGIPTLGLCLGLQCMVIE YARNVVGLEKAGSTEFDPDTPEPVIATMAEQKAFVEGAGDLGGTMRLGLYPAALKDGSIAREVYGSSLIEERHRHRYEVN NAYRDQLEEAGLVFSGTSPDNSLVEYVELPRDTHPYYISTQAHPELRSRPTRPHPLFAGLVGAAIERQRELRFPIDETGL RREPEPDED
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=556, Percent_Identity=45.6834532374101, Blast_Score=491, Evalue=1e-138, Organism=Homo sapiens, GI28559085, Length=553, Percent_Identity=45.5696202531646, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI28559083, Length=553, Percent_Identity=45.5696202531646, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI221316689, Length=553, Percent_Identity=45.5696202531646, Blast_Score=487, Evalue=1e-137, Organism=Escherichia coli, GI1789142, Length=549, Percent_Identity=53.0054644808743, Blast_Score=573, Evalue=1e-164, Organism=Caenorhabditis elegans, GI25148299, Length=606, Percent_Identity=38.1188118811881, Blast_Score=391, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6322563, Length=566, Percent_Identity=43.9929328621908, Blast_Score=440, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319432, Length=564, Percent_Identity=43.6170212765958, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI24664469, Length=556, Percent_Identity=46.5827338129496, Blast_Score=481, Evalue=1e-136, Organism=Drosophila melanogaster, GI21357815, Length=501, Percent_Identity=45.3093812375249, Blast_Score=412, Evalue=1e-115,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_NOCSJ (A1SJK4)
Other databases:
- EMBL: CP000509 - RefSeq: YP_923676.1 - ProteinModelPortal: A1SJK4 - SMR: A1SJK4 - STRING: A1SJK4 - GeneID: 4597110 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_2485 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - PhylomeDB: A1SJK4 - ProtClustDB: PRK05380 - BioCyc: NSP35761:NOCA_2485-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 62263; Mature: 62263
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 391-391 ACT_SITE 523-523 ACT_SITE 525-525
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQATPTKHVFVTGGVASSLGKGLTASSLGSLLRSRGLRVTMQKLDPYLNVDPGTMNPFQ CCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCEEEHHHCCCCEECCCCCCCCCC HGEVFVTNDGAETDLDIGHYERFLDTDLSQIANVTTGQVYSSVIAKERRGDYLGDTVQVI CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH PHITNEIKERILAMGGTGEDGRSVDVVITEVGGTVGDIESLPFLEAARQVRHDIGRENCF HHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE FLHVSLVPYIGPSGELKTKPTQHSVAALRQVGIQPDAVVCRADRELPPSIKKKISLMCDV EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHEEEEEEC DQDAVVTCADAPSIYDIPKVLHREGLDAYLVRRLDLPFRDVDWTVWDDLLRRVHHPKEEV CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHE TVALVGKYVDLPDAYLSVAEALRAGGFAHEAKVQLRWVASDECQTAAGAARNLQDVDAIC EEEEEHHHCCCCHHHHHHHHHHHHCCCCEECEEEEEEEECCCHHHHHHHHCCCCCCCEEE VPGGFGVRGIEGKLGALTYARTHGIPTLGLCLGLQCMVIEYARNVVGLEKAGSTEFDPDT ECCCCCCCCCCCCHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCC PEPVIATMAEQKAFVEGAGDLGGTMRLGLYPAALKDGSIAREVYGSSLIEERHRHRYEVN CCHHHHHHHHHHHHHHCCCCCCCEEEECEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC NAYRDQLEEAGLVFSGTSPDNSLVEYVELPRDTHPYYISTQAHPELRSRPTRPHPLFAGL HHHHHHHHHCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHH VGAAIERQRELRFPIDETGLRREPEPDED HHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQATPTKHVFVTGGVASSLGKGLTASSLGSLLRSRGLRVTMQKLDPYLNVDPGTMNPFQ CCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCEEEHHHCCCCEECCCCCCCCCC HGEVFVTNDGAETDLDIGHYERFLDTDLSQIANVTTGQVYSSVIAKERRGDYLGDTVQVI CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH PHITNEIKERILAMGGTGEDGRSVDVVITEVGGTVGDIESLPFLEAARQVRHDIGRENCF HHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE FLHVSLVPYIGPSGELKTKPTQHSVAALRQVGIQPDAVVCRADRELPPSIKKKISLMCDV EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHEEEEEEC DQDAVVTCADAPSIYDIPKVLHREGLDAYLVRRLDLPFRDVDWTVWDDLLRRVHHPKEEV CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHE TVALVGKYVDLPDAYLSVAEALRAGGFAHEAKVQLRWVASDECQTAAGAARNLQDVDAIC EEEEEHHHCCCCHHHHHHHHHHHHCCCCEECEEEEEEEECCCHHHHHHHHCCCCCCCEEE VPGGFGVRGIEGKLGALTYARTHGIPTLGLCLGLQCMVIEYARNVVGLEKAGSTEFDPDT ECCCCCCCCCCCCHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCC PEPVIATMAEQKAFVEGAGDLGGTMRLGLYPAALKDGSIAREVYGSSLIEERHRHRYEVN CCHHHHHHHHHHHHHHCCCCCCCEEEECEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC NAYRDQLEEAGLVFSGTSPDNSLVEYVELPRDTHPYYISTQAHPELRSRPTRPHPLFAGL HHHHHHHHHCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHH VGAAIERQRELRFPIDETGLRREPEPDED HHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA